LOCUS       NC_003453               2053 bp    RNA     linear   VRL 13-AUG-2018
DEFINITION  American plum line pattern virus RNA3, complete genome.
ACCESSION   NC_003453
VERSION     NC_003453.1
DBLINK      BioProject: PRJNA485481
KEYWORDS    RefSeq.
SOURCE      American plum line pattern virus
  ORGANISM  American plum line pattern virus
            Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
            Martellivirales; Bromoviridae; Ilarvirus.
REFERENCE   1  (bases 1 to 2053)
  AUTHORS   Scott,S.W. and Zimmerman,M.T.
  TITLE     American plum line pattern virus is a distinct ilarvirus
  JOURNAL   Acta Hortic. 550, 221-225 (2001)
REFERENCE   2  (bases 1 to 2053)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (23-MAR-2002) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 2053)
  AUTHORS   Zimmerman,M.T. and Scott,S.W.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-FEB-2000) Plant Pathology & Physiology, Clemson
            University, P.O. Box 340377, Clemson, SC 29634-0377, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to AF235166.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2053
                     /organism="American plum line pattern virus"
                     /mol_type="genomic RNA"
                     /db_xref="taxon:134632"
                     /segment="RNA 3"
                     /note="complete sequence of RNA3"
     gene            227..1099
                     /locus_tag="APLPVsRNA3gp1"
                     /db_xref="GeneID:984279"
     CDS             227..1099
                     /locus_tag="APLPVsRNA3gp1"
                     /codon_start=1
                     /product="putative movement protein 3a"
                     /protein_id="NP_602314.1"
                     /db_xref="GeneID:984279"
                     /translation="MAKESSSGFSTRVTSRLDAIAEEREMDEFLDFVTKSPIKQKMCC
                     DIPLKNSEMLSFVNLVTKESKSFLSLFKKIPVYTNHPLISVIYIPVVLNDAPGVLDVA
                     LVNPITRDRREILCNWPLSKAVLVMTNWTRSIAKGAELNLAYEVSNTQVKLDQQIGRF
                     RILWADVPSSKQIYEKERPPMIVDLEETGCTMHQYSDQTLLQFVNATMVSGVRKPRED
                     RKLLRLKSLRTGFEIEPAQDDEADEGKKGPIIVPSAPEELHRPFVIEGEGVIGGPIMT
                     VIEFEDIAWHLGDQ"
     misc_feature    239..>754
                     /locus_tag="APLPVsRNA3gp1"
                     /note="Bromovirus movement protein; Region: Bromo_MP;
                     pfam01573"
                     /db_xref="CDD:279858"
     gene            1263..1913
                     /locus_tag="APLPVsRNA3gp2"
                     /db_xref="GeneID:984280"
     CDS             1263..1913
                     /locus_tag="APLPVsRNA3gp2"
                     /codon_start=1
                     /product="putative coat protein"
                     /protein_id="NP_602315.1"
                     /db_xref="GeneID:984280"
                     /translation="MLKMNAPQNKGKKKQNARTTQFAQRRAAAARGEIETSSRNITAR
                     SGGPPVPRSIRTEWELVGPSVGARLIQGPHNEVVKGEAVASSTTAGQYFSIQISTYLE
                     KFLEMGVQLNSMTVLCASLQGSGIVCLTHKFTTCEAAISTLSGLRFREGRRLGFQVLP
                     PSDTVAGDVASNVRLVFKFDKAFEANAPLIERKVWVSTSRLPEIMIPANLLVPDED"
     misc_feature    1275..1907
                     /locus_tag="APLPVsRNA3gp2"
                     /note="Ilarvirus coat protein; Region: Ilar_coat;
                     pfam01787"
                     /db_xref="CDD:426433"
ORIGIN      
        1 gtatctttac caaataccat ttccgtacaa ttcactgagt aaatctaggt agcttgctcc
       61 agtgtttgtg tcttgtacga agactgtttg ttttccgatt taggtcggat tactgtttgc
      121 agtacctcca gtaattccag gtagcttgct ccggtttggg ggatccatcg accgtggtct
      181 aatcacccgc tcgaacatca ttccattctt gccatcttct tctcacatgg cgaaagaatc
      241 ctcaagtggt ttttccacta gagttacctc ccgcttagac gcaattgccg aagagcggga
      301 gatggacgaa ttcttagatt tcgtcacaaa atcacccatc aaacaaaaga tgtgttgtga
      361 tattcctctg aaaaattcag agatgctttc attcgtcaat ttagtgacga aagaatcaaa
      421 aagtttctta agtttattta agaaaattcc cgtttacacg aaccacccgt tgatatcggt
      481 catatatata ccggtggttt taaacgatgc tcctggggtt ctagatgttg cactagtgaa
      541 tccaataact agggatcgac gggagatttt atgcaactgg cctctatcta aggctgtgct
      601 agtgatgacg aattggacta ggtctatcgc taaaggggct gagttgaatc tcgcctatga
      661 agtctccaat actcaagtta aacttgatca acaaataggg agattccgga tactttgggc
      721 agatgtccca agttccaagc agatctacga gaaggagaga cctcctatga tcgtggatct
      781 tgaagaaact ggttgcacaa tgcatcagta ttctgatcag acgcttttgc agtttgtcaa
      841 tgccacgatg gtatcagggg tgcgtaaacc acgtgaagat cgtaaattat tgcgattgaa
      901 atccttgagg accggatttg aaatagaacc ggctcaagac gacgaggctg atgaagggaa
      961 gaaaggaccg attatcgttc cgtcagcccc ggaggaactc caccgcccct tcgtaatcga
     1021 gggagaggga gtgatcggtg gtccgattat gaccgtgatt gaattcgagg atatagcttg
     1081 gcacttaggt gaccagtaag actttgagaa tccgagagcg gtcagactcg gacgccagag
     1141 tctgtgatga atctgttttg gtagctggag gatatagctg agtaggtttt cctatctcgt
     1201 aagactttga cagcttgaac atgacagagt aaatcgcgga tttactcaat tcgttgaatt
     1261 gaatgctcaa aatgaatgct ccacaaaata agggaaagaa gaagcaaaat gctcgcacca
     1321 ctcagttcgc tcaacgtaga gctgcagcag ctcgcggtga gattgaaact agctcgcgca
     1381 atataactgc gcgaagtggt ggtccaccag ttcctcgctc catacgcacg gagtgggagt
     1441 tggtaggtcc ttctgtgggt gcccgtttaa ttcaggggcc tcacaacgag gtcgtcaagg
     1501 gagaggcagt tgcctcttcg acgaccgctg gtcagtactt ttctatacag attagtactt
     1561 acctcgagaa atttctcgag atgggagttc aattgaactc tatgaccgta ctctgcgcat
     1621 ctttgcaggg tagcggtatc gtttgtttga ctcacaagtt taccacttgt gaggcagcaa
     1681 tatccaccct cagtggactt aggttcagag agggtaggcg acttggtttc caagttttgc
     1741 ctcctagcga cactgtcgct ggggatgttg cctcgaatgt cagacttgtt tttaagtttg
     1801 acaaagcatt cgaagcaaat gctccgctaa tagagcggaa agtgtgggtt tcaacgtctc
     1861 ggttgcccga gattatgatt cccgcaaatt tactagtccc tgatgaggac taatgaaaat
     1921 cctattgggt cgttgacgtt gtcaacgagt taactacgat gtcggcccta ggacatctat
     1981 cgagttaacg acgatcgctt tgcgattatg cttcattttt tctttcgaaa aaatgaaatg
     2041 acccttaggg gcc
//