LOCUS       NC_003815                991 bp    DNA     circular VRL 24-AUG-2018
DEFINITION  Subterranean clover stunt virus (SCSV3) gene, complete cds.
ACCESSION   NC_003815
VERSION     NC_003815.1
DBLINK      BioProject: PRJNA485481
KEYWORDS    RefSeq.
SOURCE      Subterranean clover stunt virus
  ORGANISM  Subterranean clover stunt virus
            Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota;
            Arfiviricetes; Mulpavirales; Nanoviridae; Nanovirus.
REFERENCE   1  (bases 1 to 991)
  AUTHORS   Boevink,P., Chu,P.W. and Keese,P.
  TITLE     Sequence of subterranean clover stunt virus DNA: affinities with
            the geminiviruses
  JOURNAL   Virology 207 (2), 354-361 (1995)
   PUBMED   7886939
REFERENCE   2  (bases 1 to 991)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-AUG-2018) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 991)
  AUTHORS   Boevink,P.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-1994) Petra C. Boevink, C.S.I.R.O. Division of
            Plant Industry, GPO Box 1600, Canberra ACT 2601, Australia
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to U16732.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..991
                     /organism="Subterranean clover stunt virus"
                     /mol_type="genomic DNA"
                     /host="Trifolium subterraneum L."
                     /db_xref="taxon:36772"
                     /chromosome="component 3"
                     /lab_host="Trifolium subterraneum cv. Mt. Barker"
     stem_loop       join(981..991,1..18)
                     /note="region of sequence and predicted structural
                     similarity with the conserved stem-loop sequence in the
                     intergenic region of the geminiviruses, which is the
                     origin of replication"
     gene            371..865
                     /gene="SCSV3"
                     /locus_tag="SCSVs3gp1"
                     /db_xref="GeneID:991160"
     CDS             371..865
                     /gene="SCSV3"
                     /locus_tag="SCSVs3gp1"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="NP_620697.1"
                     /db_xref="GeneID:991160"
                     /translation="MALRYFSHLPEELKEKIMNEHLKEIKKKEFLENVIKAACAVFEG
                     LTKKESVEEDDILRFSGFLEGLSAYYAEATKKKCLVRWKKSVAINLKWRVMEEMHYKL
                     YGFADMEDLYCSELGFPNYGEDDVAYHDGAIVNCKQLEVVFDDLGIEFMSIVIDRGSI
                     KIEL"
ORIGIN      
        1 tagtattacc cccgtgccgg gatcagagac atttgaccaa tagttgacta tgaataatag
       61 cccttggatt agatgacacg tggacgctca ggatctgtga tgctagtgaa gcgcttaagc
      121 tgaacgaatc tgacggaaga gcggacatac gcacatggat tatggcccac atgtctaaag
      181 tgtatctctt tacagctata ttgatgtgac gtaagatgct ttacttcgcc tcgaagtaaa
      241 gtaggaaatt gctcgctaag ttattctttt ctgaaagaaa ttaatttaat tctaaattaa
      301 attaaatgag tggctataaa tagatgtttc gtcttcgttg ttttacaacg aagcttagaa
      361 tcttgtgtta atggcgttaa ggtatttctc tcatcttcct gaagaactga aggagaagat
      421 tatgaacgag cacttgaagg aaattaagaa gaaggaattt ctagagaatg taattaaagc
      481 tgcgtgtgct gtgttcgaag gtttaacaaa gaaggagtct gttgaagaag acgacatact
      541 acgcttctct gggtttctgg aaggtctgtc tgcatattat gcagaggcga cgaagaagaa
      601 gtgtttagtt agatggaaga agagcgttgc aataaatctg aaatggagag ttatggagga
      661 gatgcattac aagctttatg gatttgcaga catggaagat ttatattgtt cagagttagg
      721 gtttcctaat tacggtgaag acgatgtagc ttatcacgat ggtgcaattg taaattgtaa
      781 gcaattagaa gttgtatttg atgatttagg tattgagttt atgtctattg taattgatag
      841 aggttctatt aagatagaat tatgagatgt aattgtgatt aatgaataaa gagttgttat
      901 tattctttga attactccgc gaagcggtgt gttatgtttt tgttggagac atatgacgtc
      961 atatgtctcg ccgacaggct ggcacggggc t
//