LOCUS       NC_003819                988 bp    DNA     circular VRL 24-AUG-2018
DEFINITION  Subterranean clover stunt virus (SCSV7) gene, complete cds.
ACCESSION   NC_003819
VERSION     NC_003819.1
DBLINK      BioProject: PRJNA485481
KEYWORDS    RefSeq.
SOURCE      Subterranean clover stunt virus
  ORGANISM  Subterranean clover stunt virus
            Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota;
            Arfiviricetes; Mulpavirales; Nanoviridae; Nanovirus.
REFERENCE   1  (bases 1 to 988)
  AUTHORS   Boevink,P., Chu,P.W. and Keese,P.
  TITLE     Sequence of subterranean clover stunt virus DNA: affinities with
            the geminiviruses
  JOURNAL   Virology 207 (2), 354-361 (1995)
   PUBMED   7886939
REFERENCE   2  (bases 1 to 988)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-AUG-2018) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 988)
  AUTHORS   Boevink,P.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-1994) Petra C. Boevink, C.S.I.R.O. Division of
            Plant Industry, GPO Box 1600, Canberra ACT 2601, Australia
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to U16736.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Subterranean clover stunt virus"
                     /mol_type="genomic DNA"
                     /isolate="F"
                     /host="Trifolium subterraneum L."
                     /db_xref="taxon:36772"
                     /chromosome="component 7"
                     /lab_host="Trifolium subterraneum cv. Mt. Barker"
     stem_loop       join(978..988,1..17)
                     /note="region of sequence and predicted structural
                     similarity with the conserved stem-loop sequence in the
                     intergenic region of the geminiviruses, which is the
                     origin of replication"
     gene            379..819
                     /gene="SCSV7"
                     /locus_tag="SCSVs7gp1"
                     /db_xref="GeneID:991164"
     CDS             379..819
                     /gene="SCSV7"
                     /locus_tag="SCSVs7gp1"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="NP_620701.1"
                     /db_xref="GeneID:991164"
                     /translation="MVSFSFPEIYDVSDDVLVSDSRRSVAVEVEEKVQVINVKVLRLI
                     EAVDEDRVGVKVMFRLCYRYRRELKITLLGCKMELWTSLKSSGKYSVQSLLQRKLNGI
                     CVSNYCIGIDMFVSNVKELINRCKWITSVQGVNPICCLYHMDEE"
ORIGIN      
        1 tagtattacc ccgtgccggg atcagagaca tttgactaaa tattgacttg gaataatagc
       61 ccttggatta gatgacacgt ggacgctcag gatctgtgat gctagtgaag cgcttaagct
      121 gaacgaatct gacggaagag cggacatacg cacatggatt atggcccaca tgtctaaagt
      181 gtatctcttt acagctatat tgatgtgacg taagatgctt tacttcgctt cgaagtaaag
      241 taggaaattg ctcgctaagt tattcttttc tgaaagaaat taatttaatt ctaattaaat
      301 taaatgagtg gctataaata gtgtcgatgc tgcctcacat cgtattcttc ttcgcatcgt
      361 ctgttctggt tttaagcgat ggtcagtttt agttttcctg agatatacga tgtgagcgac
      421 gatgttcttg taagcgatag cagaagaagt gtagctgttg aggtcgaaga gaaggttcaa
      481 gtgattaacg tgaaggtact gaggttgatt gaagctgttg atgaagatag agttggagtg
      541 aaggttatgt ttcgtctgtg ttacagatac agacgagaac tgaagattac gttgttgggt
      601 tgtaagatgg agctatggac ttcgttgaag tcttcaggca agtattcagt tcaatctttg
      661 ttgcagagga agcttaatgg tatatgtgtt agtaattact gtataggtat tgatatgttt
      721 gtaagtaatg ttaaagagtt gattaataga tgtaaatgga ttacatctgt tcaaggtgtt
      781 aatcctatat gttgtttgta tcatatggac gaagagtaat taatagtaat tatgattaat
      841 tatgagataa gagttgttat taatgcttat gaggaataaa gaatgattaa tattgtttaa
      901 ttttattcgc gaagcggtgt gttatgtttt tgttggagac atcacgtgac tctcacgtga
      961 tgtctccgcg acaggctggc acggggct
//