LOCUS NC_004442 5097 bp DNA linear VRL 13-AUG-2018
DEFINITION Canine minute virus, complete genome.
ACCESSION NC_004442
VERSION NC_004442.1
DBLINK BioProject: PRJNA485481
KEYWORDS RefSeq.
SOURCE Canine minute virus
ORGANISM Canine minute virus
Viruses; Monodnaviria; Shotokuvirae; Cossaviricota;
Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae;
Bocaparvovirus; Bocaparvovirus carnivoran1.
REFERENCE 1 (bases 1 to 5097)
AUTHORS Schwartz,D., Green,B., Carmichael,L.E. and Parrish,C.R.
TITLE The canine minute virus (minute virus of canines) is a distinct
parvovirus that is most similar to bovine parvovirus
JOURNAL Virology 302 (2), 219-223 (2002)
PUBMED 12441065
REFERENCE 2 (bases 1 to 5097)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (17-DEC-2002) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 5097)
AUTHORS Parrish,C.R., Schwartz,D. and Carmichael,L.E.
TITLE Direct Submission
JOURNAL Submitted (25-MAR-2002) J.A.Baker Institute, College of Veterinary
Medicine, Cornell University, Ithaca, NY 14850, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to AF495467.
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..5097
/organism="Canine minute virus"
/mol_type="genomic DNA"
/db_xref="taxon:329639"
gene 429..2579
/locus_tag="Mvocgp1"
/db_xref="GeneID:956024"
CDS 429..2579
/locus_tag="Mvocgp1"
/note="replication protein; nickase; helicase; NS1"
/codon_start=1
/product="non structural protein 1"
/protein_id="NP_758521.1"
/db_xref="GeneID:956024"
/translation="MPGPDSPVEQTSFLETHGPDSSYHLNLSHCAHMAAYSVFSVKQG
RAPPVASIFVQSEIGERDLHLHLVLGGQGLNKYSAKAFRHQLQYKFCENLITVLEKHV
NEGTTSDPEMCSVLIKCLSKAKNEEHAYCTILQYKSRSGDLYACRVDPVEFICNYLLR
KNLKYYTCMDPDKATQHIAYFDATSKTYAVTLANGKWVPTDCRKQWLNILRHNVIQKN
EPIFAGEMFDVLPKVPESSWKIDMLSSQSKITKRETLMIDCMNRCEQNYWLTYEDLVN
GCADLVVMLECQSGGNKLIEQILSMVHIKMTQKYTALSYILAKYDPIPFTTDNKVWKL
LTLQGYNPWQFGHWLLCVLDKKAGKQNTINFYGPASTGKTNLAKAIVNAVQLYGCVNH
QNKNFVFNDCTAKLICWWEECIMTTDWVEQAKCIMGGTQFRIDRKHKDSHLLPQTPLI
ISTNHNIYEVTGGNTTTHVHSMPLRERVVQFNFMKQLESTFGEIEPTDVVALLQVCYK
KYSVSLSDFHRTWNIKKTPNDFPLTVVCSNHTQDLIVFESGLCGSCGGYYPLETWNEN
NCQNIEEEDITGEILNHNDISYEEFEEWITNFDFSLLDSPETPNATTPSRKRTSSDET
INSPPKKQRKTEHKVLIDWSSQPSTSAEQYVYETYEQEIKSEEPESQSTGLTPSEWGE
RLGIIPQGMDQEPIVLHCFETIDWEEDNTDACIQ"
misc_feature 1206..1949
/locus_tag="Mvocgp1"
/note="Parvovirus non-structural protein NS1; Region:
Parvo_NS1; pfam01057"
/db_xref="CDD:426020"
gene 2389..2949
/locus_tag="Mvocgp2"
/db_xref="GeneID:956021"
CDS 2389..2949
/locus_tag="Mvocgp2"
/codon_start=1
/product="NP1"
/protein_id="NP_758522.1"
/db_xref="GeneID:956021"
/translation="MSTRHMSKRSKARSRSRSPQDSRRPNGERDLGSFHRGWTRNQSS
STVSRQSTGRKTTPMHVFNEHKSRSKEPLPAFCGFYWHSTRLARCGTDWIFNEGKPKF
QSVCHENKITWDQCREMLFEFKKTIDQKYRNIMYHMGRGGFCQKCCYWDDVYTKHLAN
VNDVLTQDLSDAEMLSAAMEVDGSSE"
gene 2933..5044
/locus_tag="Mvocgp3"
/db_xref="GeneID:956022"
CDS 2933..5044
/locus_tag="Mvocgp3"
/note="minor capsid protein; VP1"
/codon_start=1
/product="virus protein 1"
/protein_id="NP_758523.1"
/db_xref="GeneID:956022"
/translation="MAPPNRKPGGWVVPGYKYLGPFNPLDNGTPINKVDKAAQKHDFA
YQSYINKGENPYLNFNKADSDFIEDLKNDSSFAGWLGKSAFRLKRILAPHLKENTPPA
KRVAGNSRQDRAQKRKLYFARSNKNSKQARMEPQETENTIEADAGIAGRAGGGGGPGG
GGSGGGSGVGVSTGGWEGGTLFGDNRVITVNTRQWYAPIYNGHRYTKLEGTGNTFWKG
IKTPWGYFNFNAYDSHFSPQDWQRLTNEYRRWRPKKMMVKIYNLQIKQVVTLQGDTLY
NNDLTAGVHIFCDGSHQYPYSQHPWDAGTMPELPYKVWLLENYGYFQFQGDLIDTSVD
GGSPDVENVEKEIAKSAPFYILENANHEVLRTGEETNFHFNFDCGWVNNDRAYCPLQA
DFNPLVKTRRYFATRNNYNNSGKFVYTRYSPYNKPSQWMPGPSLGYIGNTQSAATREQ
ALGPVTVVTAPPGTSAYTAFTEQQSKTNQQSASNATWSGYDVSPVNCARSGFDKIGLA
YDSAPESELEEKISIRDIDNDMSRWGQVFVQDGTNKEISNDNTGQGGNTRQNMAELKN
VWMFPNQAWDSTPISRDFPIWVKSPNTDKHTLFDSSDGTLPMSHPPGTIFVKVAKIPI
PTQTNTDSYLTLYVTGQVTCTIEWEVERFMTKNWRPESKNDVSSFRDAFLYTVGADGT
YNTPERFLEGMPTRRGINKTL"
misc_feature 2960..3196
/locus_tag="Mvocgp3"
/note="Parvovirus coat protein VP1; Region: Parvo_coat_N;
pfam08398"
/db_xref="CDD:429973"
misc_feature 3458..4915
/locus_tag="Mvocgp3"
/note="Parvovirus coat protein VP2; Region: Parvo_coat;
pfam00740"
/db_xref="CDD:395599"
gene 3329..5044
/locus_tag="Mvocgp4"
/db_xref="GeneID:956023"
CDS 3329..5044
/locus_tag="Mvocgp4"
/note="major capsid protein; VP2"
/codon_start=1
/product="virus protein 2"
/protein_id="NP_758524.1"
/db_xref="GeneID:956023"
/translation="MEPQETENTIEADAGIAGRAGGGGGPGGGGSGGGSGVGVSTGGW
EGGTLFGDNRVITVNTRQWYAPIYNGHRYTKLEGTGNTFWKGIKTPWGYFNFNAYDSH
FSPQDWQRLTNEYRRWRPKKMMVKIYNLQIKQVVTLQGDTLYNNDLTAGVHIFCDGSH
QYPYSQHPWDAGTMPELPYKVWLLENYGYFQFQGDLIDTSVDGGSPDVENVEKEIAKS
APFYILENANHEVLRTGEETNFHFNFDCGWVNNDRAYCPLQADFNPLVKTRRYFATRN
NYNNSGKFVYTRYSPYNKPSQWMPGPSLGYIGNTQSAATREQALGPVTVVTAPPGTSA
YTAFTEQQSKTNQQSASNATWSGYDVSPVNCARSGFDKIGLAYDSAPESELEEKISIR
DIDNDMSRWGQVFVQDGTNKEISNDNTGQGGNTRQNMAELKNVWMFPNQAWDSTPISR
DFPIWVKSPNTDKHTLFDSSDGTLPMSHPPGTIFVKVAKIPIPTQTNTDSYLTLYVTG
QVTCTIEWEVERFMTKNWRPESKNDVSSFRDAFLYTVGADGTYNTPERFLEGMPTRRG
INKTL"
misc_feature 3458..4915
/locus_tag="Mvocgp4"
/note="Parvovirus coat protein VP2; Region: Parvo_coat;
pfam00740"
/db_xref="CDD:395599"
ORIGIN
1 ctccatataa agacaatatc aaaatggagg acggaagtgt gattctgctt actcatagtt
61 atataacaca cttatgaata tgctaataca gagattagaa tatccaatca tattgaaaca
121 caagtactgc agtagtagat gtggctgctt ctgattggat gttaagagta tataaggata
181 ggtatttcct gcttctgttc atttcgcttc cggacttcgt cgagagaaca tctctgactt
241 ctaaccgtga gtgatgtcga cgcttccaat cgcgtcttta gacgacctta ctcaattttt
301 ctactcctgc ttatacttat atcctgaaat ttccatatgt ggggtggaag gctgatgaag
361 ttcgtctgca aagagcactg ggcggtattc ggggagacgc tctcgatgat ccatccgtgt
421 acatcgggat gcctggtccc gatagtccgg ttgagcagac gagttttctc gagacacatg
481 gacctgattc cagttatcat cttaacctgt cgcattgtgc acatatggct gcctatagcg
541 tattctccgt taaacaggga agagcacctc cggtggctag catttttgtc cagagcgaga
601 ttggcgaacg cgatttgcac cttcatttgg tccttggagg acaggggcta aataaatata
661 gcgctaaagc gttccgccat cagctacagt acaaattctg tgaaaatcta atcaccgttc
721 tagagaaaca tgtaaacgaa ggaactactt ctgatcctga aatgtgttca gttcttataa
781 aatgtctatc caaagctaaa aacgaagaac atgcatattg tactatttta caatataaaa
841 gcagaagtgg ggacctctat gcatgcagag tagatccagt agaatttatc tgcaactatc
901 tacttcgaaa aaaccttaaa tactacacct gtatggatcc agataaagcc acacaacata
961 ttgcctattt tgatgccaca agtaagactt acgctgtaac cttagctaat ggaaaatggg
1021 ttccaacaga ctgtagaaag caatggctaa atatacttcg ccacaacgtg atccaaaaaa
1081 acgagccaat atttgccgga gaaatgtttg atgttttgcc taaggtacct gaatcttctt
1141 ggaaaattga tatgctttct tctcaatcta aaataactaa gagagagact ttaatgattg
1201 actgtatgaa tcgatgtgag caaaattact ggttaacata tgaagacctt gtaaatgggt
1261 gcgccgatct cgttgttatg ttagaatgtc aatcgggcgg aaacaaactt atagaacaga
1321 tacttagtat ggttcatata aagatgacgc aaaaatatac tgcgcttagt tatattttag
1381 caaaatatga tccaatccca tttacgactg acaataaagt gtggaaatta ttaactttac
1441 agggatataa tccttggcaa tttggacact ggttattatg tgtcctagat aaaaaggcgg
1501 gaaagcagaa cacaataaac ttttatggtc ctgcaagtac cgggaaaacc aatttagcca
1561 aagccattgt aaacgctgtt cagttatatg gatgtgtaaa tcaccaaaat aagaactttg
1621 ttttcaatga ttgtactgca aaattaatat gttggtggga agaatgtatc atgactactg
1681 attgggtgga acaagcaaaa tgtataatgg ggggcacaca atttagaata gacagaaaac
1741 ataaggattc acatctatta ccgcaaacac cgttaataat atcaaccaat cataatatat
1801 atgaagtcac aggaggcaat accactacac atgttcattc tatgccactt cgggagagag
1861 ttgttcaatt taactttatg aaacaacttg aaagcacgtt cggtgaaata gagccaacag
1921 acgttgttgc attattacaa gtatgttaca aaaaatattc agtttcattg tcagactttc
1981 atcgtacttg gaacattaaa aaaactccaa atgactttcc attgacggtt gtctgttcaa
2041 atcatacaca ggatctaatt gttttcgaga gtggtctatg cggatcgtgc ggaggctatt
2101 atccactaga gacgtggaat gaaaataact gccaaaatat agaagaagaa gacataacag
2161 gtgagatcct taatcacaat gatatatcct atgaagaatt cgaggaatgg atcactaact
2221 tcgatttttc gctcttagac tctccagaaa caccaaacgc taccactcca tcaagaaaac
2281 gaacaagttc ggacgaaacc ataaattcgc ctccaaaaaa acaacgcaaa acagaacaca
2341 aggtactgat cgattggtcc tcacaaccat ctacttcggc cgagcaatat gtctacgaga
2401 catatgagca agagatcaaa agcgaggagc cggagtcgca gtccacagga ctcacgccgt
2461 ccgaatgggg agagagactt gggatcattc cacaggggat ggaccaggaa ccaatcgtcc
2521 tccactgttt cgagacaatc gactgggagg aagacaacac cgatgcatgt attcaatgaa
2581 cataaaagca gaagcaaaga acctcttcct gcgttctgtg gcttctactg gcacagcact
2641 agattagctc ggtgtgggac tgactggatt tttaatgagg gaaaacccaa attccaatca
2701 gtatgtcatg aaaacaaaat aacatgggat caatgtagag aaatgttatt tgaatttaag
2761 aaaacaatag atcaaaaata tagaaatatt atgtatcata tgggacgagg ggggttctgt
2821 caaaaatgtt gttactggga tgatgtgtac accaagcatt tggctaatgt taacgatgtt
2881 ctcacacagg atctgtctga cgcagaaatg ctttcagctg caatggaggt agatggctcc
2941 tccgaataga aaaccaggtg gttgggtcgt tcctggatat aaatatcttg gaccattcaa
3001 tccactagat aatggcactc caataaacaa agttgacaaa gcagctcaaa aacacgattt
3061 tgcatatcaa tcgtatatta ataaaggtga aaatccatat ttaaacttca ataaagctga
3121 ttctgatttt attgaggatc tcaaaaacga ttcatccttt gccgggtggc taggcaagtc
3181 tgcatttaga cttaaacgta ttttggctcc acatctaaaa gaaaacactc ctcctgctaa
3241 aagagtggcc ggaaacagta gacaagatag ggcgcaaaag aggaaactct attttgcgcg
3301 ttctaacaaa aactctaaac aagctaggat ggaaccgcag gaaactgaga acactattga
3361 ggctgatgcg ggcattgcgg ggcgtgctgg gggtggtggt ggacctggtg gaggtggatc
3421 gggcggtggc tccggggtcg gagttagtac cggtgggtgg gaaggaggaa cgctgttcgg
3481 agataataga gtcatcacag ttaacacacg acagtggtat gcacctatat acaacggaca
3541 tagatacacc aagcttgagg gaaccggaaa cacattctgg aaagggataa aaactccatg
3601 gggatacttt aattttaacg cgtacgactc gcacttttca ccacaagact ggcaacgtct
3661 cacaaatgag tacagaagat ggagaccaaa aaaaatgatg gtaaaaatat ataacttaca
3721 aataaaacag gtagttacac tgcaggggga cactttatat aataatgatc ttacagcagg
3781 agtacacatt ttttgtgacg gaagtcatca atatccatat tcccagcatc cgtgggatgc
3841 tggaacgatg ccagaacttc cctataaagt ctggttgctg gaaaactatg gttacttcca
3901 attccaaggt gacctaatag acacgagcgt ggacggtggt tctccagacg ttgaaaatgt
3961 agaaaaggar attgcgaaat ctgctccttt ctacattctc gaaaatgcaa accatgaggt
4021 gttacgtact ggggaggaaa caaacttcca ttttaacttt gattgtgggt gggtcaataa
4081 tgaccgggca tactgcccac tacaggcgga ctttaatcca ctggttaaaa ccagacgcta
4141 cttcgctaca cgaaacaact acaacaactc aggaaaattc gtgtacacgc gatacagtcc
4201 gtataacaag ccatcacagt ggatgccagg accatcgctt ggatacattg gaaacacaca
4261 aagcgcggct actcgggaac aagccctcgg accagtaact gtagtgactg ctccacctgg
4321 gacatcagct tacactgcct tcactgaaca acaatcaaaa accaatcagc agtctgcatc
4381 taatgcaacg tggtccggtt atgatgtcag tccagtaaac tgcgcacgct ctggattcga
4441 taagatagga ttagcctatg actctgctcc ggaaagtgag ttggaggaga aaatatctat
4501 tagagacatc gacaacgaca tgagccgatg gggtcaagtg ttcgtgcaag acggaacaaa
4561 caaggaaata tcaaacgata acactggtca agggggaaac acacgacaaa acatggcaga
4621 gttaaaaaat gtatggatgt tccccaatca agcatgggat tcgacgccca tcagcaggga
4681 cttcccgatt tgggtaaaat caccaaacac ggacaaacat acactattcg atagctcgga
4741 tggaactctg cctatgtcgc atccgccggg aactatattt gttaaagttg ctaaaatacc
4801 aataccaact cagacaaata cagattcata tttaactctg tatgttaccg gtcaggtcac
4861 atgcacaata gaatgggagg tcgagcgatt tatgaccaag aactggagac ccgagtcaaa
4921 gaacgacgta tcatctttca gagacgcctt cctatacaca gtgggagcag acggaactta
4981 taatacacca gaaaggttcc tggaaggaat gccaacaaga agaggcataa acaaaacgct
5041 gtaattgata taatctttac catgtagtag tataccgtca ccactgggtg tgtttta
//
