LOCUS       NC_004658               2587 bp ss-DNA     circular VRL 13-AUG-2018
DEFINITION  Sida golden mosaic Costa Rica virus DNA B, complete sequence.
ACCESSION   NC_004658
VERSION     NC_004658.1
DBLINK      BioProject: PRJNA485481
KEYWORDS    RefSeq; BC1 gene; BV1 gene.
SOURCE      Sida golden mosaic Costa Rica virus
  ORGANISM  Sida golden mosaic Costa Rica virus
            Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota;
            Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus.
REFERENCE   1
  AUTHORS   Hofer,P., Engel,M., Jeske,H. and Frischmuth,T.
  TITLE     Nucleotide sequence of a new bipartite geminivirus isolated from
            the common weed Sida rhombifolia in Costa Rica
  JOURNAL   J. Gen. Virol. 78 (Pt 7), 1785-1790 (1997)
   PUBMED   9225056
REFERENCE   2  (bases 1 to 2587)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (28-MAR-2003) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 2587)
  AUTHORS   Hoefer,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JUL-1996) P. Hoefer, Universitaet Stuttgart,
            Biologisches Institut, Pfaffenwaldring 57, D- 70550 Stuttgart, FRG
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from X99551.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2587
                     /organism="Sida golden mosaic Costa Rica virus"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:223313"
                     /segment="DNA B"
     rep_origin      1..172
     gene            593..1363
                     /gene="BV1"
                     /locus_tag="SiGMCRVsBgp1"
                     /db_xref="GeneID:988173"
     CDS             593..1363
                     /gene="BV1"
                     /locus_tag="SiGMCRVsBgp1"
                     /codon_start=1
                     /product="BV1 protein"
                     /protein_id="NP_808892.1"
                     /db_xref="UniProtKB/TrEMBL:Q87061"
                     /db_xref="GeneID:988173"
                     /translation="MYPYRYKRGPSFAARRSYTRNYAFKRPTNSKRDDGKRRPVNNNK
                     AHDEPKMSAQRMHENQFGPDFVMAHNSAISTFISYPSLCKTEPNRSRSYIKLKRLRFK
                     GTVKIERVQADVSMDGAIPKVEGVFSFVIVVDRKPHLGTSGCLHTFDELFGARIHSHG
                     NLSITPSLKERFYIRHVFKRVLSVEKDTLMVDVEGSTTLSNRRYNCWSTFKDLDRDSC
                     NGVYGNISKNAVLVYYCWMSDAMSKASTFVSFDLDYVG"
     misc_feature    611..1360
                     /gene="BV1"
                     /locus_tag="SiGMCRVsBgp1"
                     /note="Geminivirus coat protein/nuclear export factor BR1
                     family; Region: Gemini_coat; pfam00844"
                     /db_xref="CDD:307130"
     gene            complement(1387..2289)
                     /gene="BC1"
                     /locus_tag="SiGMCRVsBgp2"
                     /db_xref="GeneID:988172"
     CDS             complement(1387..2289)
                     /gene="BC1"
                     /locus_tag="SiGMCRVsBgp2"
                     /codon_start=1
                     /product="BC1 protein"
                     /protein_id="NP_808913.1"
                     /db_xref="GeneID:988172"
                     /translation="MRAFLYHMDSQLVNPPNAFNYMESHREEYQLSHDLTEIFLQFPS
                     TASQLTARFSRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTDNESLQASWTFPI
                     RCNIDLHYFSASFFSLKDPIPWKLYYKVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIP
                     FRAPTVRILSKQFTDKDVDFSHVDYGRWERKPIRCASMSRVGLRGPLEIKPGESWASR
                     SAVGTGHSDADSEVENELHPYRHLSRLGTSVLDPGESASIVGAQRAESNITMSMGQLN
                     ELVRTTVQECINSNCKPSQPKSLQ"
     misc_feature    complement(1393..2232)
                     /gene="BC1"
                     /locus_tag="SiGMCRVsBgp2"
                     /note="Geminivirus BL1 movement protein; Region:
                     Gemini_BL1; pfam00845"
                     /db_xref="CDD:307131"
ORIGIN      
        1 ggcggtggca tttttgtaat aagaatgggt actctagttg gagtactcca gttgagccct
       61 ctcaaacttg ctcattctat tggagtatta gagtaccata tatactactt gtgtttatct
      121 tggttttggt acacgtggcg gccatccgta taatattacc ggatggccgc gcggagtatg
      181 ctatgtgtcc gtactctaca gctggtgcgc attactccgc tcccctctct cctggtgtct
      241 ttgccacctg gcgctctctc cgccctcgat ttatctttcc tttcgttgat tggcgtctct
      301 ttattgacca gcctttaatt taaattaaag tttagtcctt ttatgtcggc gcgatatcaa
      361 ttcaattttg aattattgat tcgcgattcc tgtttatggc ccccattgta ctacatggtc
      421 gacgtggacg atttgagacc atgctgctga gtcaggttac gttctattgc taattagcct
      481 tttctatata ttggggccgg tttgtatatt ttgatcgatg tgactcagct ctcgaccacg
      541 tatatattat tagccactta ttatctgccc gatcaagtat tactatatga tcatgtatcc
      601 ttacaggtat aagcgtggtc cctcgttcgc tgcacgacga tcttatacac gtaattatgc
      661 gtttaagcgt cctactaatt ccaaacgaga tgatgggaaa cgtaggcctg ttaacaataa
      721 taaggcccat gatgaaccca agatgtcagc ccagcggatg cacgagaatc agttcggtcc
      781 ggactttgtt atggcccata attcagccat ttcaacgttc atcagttacc ccagtctttg
      841 taagactgaa ccgaatcgga gcaggtccta tatcaagttg aaacgactgc gtttcaaagg
      901 cactgtgaag attgaacgtg ttcaggcaga tgttagcatg gacggtgcta tccctaaagt
      961 ggaaggtgtg ttctccttcg ttattgttgt ggatcgtaaa ccacacttgg gtacctctgg
     1021 ttgtctccac acgttcgacg agctcttcgg tgctaggatc cacagccatg gtaacctgag
     1081 cataacccct tcattgaaag agcggttcta cataagacac gtgttcaaac gtgtattgtc
     1141 tgtggagaag gatacgttaa tggttgacgt ggaagggtcc actacgctct ctaacagacg
     1201 ctataattgt tggtctacgt ttaaggatct agatcgtgac tcgtgtaatg gtgtctatgg
     1261 caatattagc aagaacgccg tcttagttta ttattgttgg atgtcagatg ctatgtccaa
     1321 ggcatctaca tttgtatcgt ttgaccttga ctatgttgga tgattaatga ataaaaataa
     1381 aaagttttat tgcaatgatt tgggctgtga cggtttacaa ttactgttaa tacattcttg
     1441 gaccgtagtc ctaactagct cgtttaattg gcccattgac attgttatat tggattctgc
     1501 tctctgggct cctactattg aagcagactc tcccggatcc aaaacgctgg tccccagcct
     1561 acttaggtgc ctgtaaggat gcaactcgtt ttccacctcg gagtccgcat ctgaatgccc
     1621 cgttcccacc gcactcctgg aagcccacga ttcaccgggc ttgatctcaa gtgggcctct
     1681 gagcccaacc ctggacatgg aggcgcatct gatgggcttc ctttcccatc ttccgtagtc
     1741 gacgtgggag aagtccacat ccttgtcggt gaactgtttg gacaggatcc tgactgtcgg
     1801 tgcccggaat ggtatatcca ccgagtgttt cgccgtcgac agcttcagct tccccttgaa
     1861 cttggcgaag tgggtcctct gatgaacatt ggtatcggaa actttgtaat acagtttcca
     1921 tggaattggg tccttgagag agaaaaagga agctgagaag tagtggagat ctatgttgca
     1981 tctgatcgga aaagtccatg acgcctgtaa ggattcgttg tccgtcatcc tcttgtcgtg
     2041 tatctccacg attaccgacc cggtggcgtt aatcggcacc tgttgcctgt actctatgac
     2101 gcaatggtca atcttcatgc agctccggct gaatctcgcc gttaactgag acgccgtcga
     2161 tggaaattgc agaaatatct cagttaggtc atgggaaagc tgatattctt ctctgtgaga
     2221 ctccatgtag ttaaaggcgt ttggaggatt aactaactga gaatccatat ggtaaagaaa
     2281 ggcgcgcagc ggaaccgatt gctgaagttg aatcggtaac tgggttgtta gggttctttt
     2341 tgaagaacag ttgttgaact actcttgaat atgaaagtgt ttctgggttt cccagaaatt
     2401 tgatgaacaa gctgaagaac tcttgtttaa tctctcttga atgtgaaatt gtttttgaga
     2461 aaaaggagaa atctggtgaa gaaactgaag atggtagtca gttagatctg acattagtta
     2521 tttatagaca tctttctttt gtttgtgagc tctttgtttt agagctttca ggatacgttt
     2581 ttgctaa
//