LOCUS NC_007376 2233 bp cRNA linear VRL 13-AUG-2018
DEFINITION Influenza A virus (A/Korea/426/1968(H2N2)) segment 3, complete
sequence.
ACCESSION NC_007376
VERSION NC_007376.1
DBLINK BioProject: PRJNA485481
KEYWORDS RefSeq.
SOURCE Influenza A virus (A/Korea/426/1968(H2N2))
ORGANISM Influenza A virus (A/Korea/426/1968(H2N2))
Viruses; Riboviria; Orthornavirae; Negarnaviricota;
Polyploviricotina; Insthoviricetes; Articulavirales;
Orthomyxoviridae; Alphainfluenzavirus; Alphainfluenzavirus
influenzae.
REFERENCE 1 (sites)
AUTHORS Okazaki,K., Kawaoka,Y. and Webster,R.G.
TITLE Evolutionary pathways of the PA genes of influenza A viruses
JOURNAL Virology 172 (2), 601-608 (1989)
PUBMED 2800339
REFERENCE 2 (bases 1 to 2233)
AUTHORS Okazaki,K., Kawaoka,Y. and Webster,R.G.
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 2233)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (30-AUG-2005) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from M26079.
[2] sites; for [1].
Draft entry and computer readable copy of sequence [1] kindly
submitted by K.Okazaki, 18-JUL-1989.
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..2233
/organism="Influenza A virus (A/Korea/426/1968(H2N2))"
/mol_type="viral cRNA"
/strain="A/Korea/426/1968"
/serotype="H2N2"
/db_xref="taxon:488241"
/segment="3"
/country="South Korea"
/collection_date="1968"
gene 25..2175
/gene="PA"
/locus_tag="FLUAVH2N2_s3p1"
/db_xref="GeneID:3655106"
CDS 25..2175
/gene="PA"
/locus_tag="FLUAVH2N2_s3p1"
/codon_start=1
/product="polymerase PA"
/protein_id="YP_308852.1"
/db_xref="GeneID:3655106"
/translation="MEDFVRQCFNPMIVELAEKAMKEYGEDLKIETNKFAAICTHLEV
CFMYSDFHFINEQGESIMVELDDPNALLKHRFEIIEGRDRTMAWTVVNSICNTTGAEK
PKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSENTHIHIFSFTGEEMATKAD
YTLDEESRARIKTRLFTIRQEMANRGLWDSFRQSERGEETIEERFEITGTMRRLADQS
LPPNFSCLENFRAYVDGFEPNGYIEGKLSQMSKEVNAKIEPFLKTTPRPIRLPDGPPC
FQRSKFLLMDALKLSIEDPSHEGEGIPLYDAIKCMRTFFGWKEPYIVKPHEKGINPNY
LLSWKQVLAELQDIENEEKIPRTKNMKKTSQLKWALGENMAPEKVDFDNCRDISDLKQ
YDSDEPELRSLSSWIQNEFNKACELTDSIWIELDEIGEDVAPIEHIASMRRNYFTAEV
SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNLYGFIIKGR
SHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLLRSAIGQMSRPMFLYVR
TNGTSKIKMKWGMEMRPCLLQSLQQIESMVEAESSVKEKDMTKEFFENKSETWPIGES
PKGVEEGSIGKVCRTLLAKSVFNSLYASPQLEGFSAESRKLLLVVQALRDNLEPGTFD
LGGLYEAIEECLINDPWVLLNASWFNSFLTHALR"
misc_feature 85..2169
/gene="PA"
/locus_tag="FLUAVH2N2_s3p1"
/note="Influenza RNA-dependent RNA polymerase subunit PA;
Region: Flu_PA; pfam00603"
/db_xref="CDD:395480"
gene 25..784
/gene="PA-X"
/locus_tag="FLUAVH2N2_s3p2"
/db_xref="GeneID:13229461"
CDS join(25..597,599..784)
/gene="PA-X"
/locus_tag="FLUAVH2N2_s3p2"
/ribosomal_slippage
/codon_start=1
/product="PA-X protein"
/protein_id="YP_006495803.1"
/db_xref="GeneID:13229461"
/translation="MEDFVRQCFNPMIVELAEKAMKEYGEDLKIETNKFAAICTHLEV
CFMYSDFHFINEQGESIMVELDDPNALLKHRFEIIEGRDRTMAWTVVNSICNTTGAEK
PKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSENTHIHIFSFTGEEMATKAD
YTLDEESRARIKTRLFTIRQEMANRGLWDSFVSPKEAKKQLKKDLKSQGQCAGLPTKV
SRRTSPALRILEPMWMDSNRTATLRASFLKCPKK"
misc_feature join(85..597,599..>610)
/gene="PA-X"
/locus_tag="FLUAVH2N2_s3p2"
/note="Influenza RNA-dependent RNA polymerase subunit PA;
Region: Flu_PA; pfam00603"
/db_xref="CDD:395480"
ORIGIN
1 agcaaaagca ggtactgatt cgaaatggaa gattttgtgc gacaatgctt caatccgatg
61 attgtcgaac ttgcggaaaa ggcaatgaaa gagtatggag aagatctgaa aatcgaaaca
121 aacaaatttg cagcaatatg cactcacttg gaagtatgct tcatgtattc agattttcat
181 ttcatcaatg agcaaggcga gtcaataatg gtagagcttg atgatccaaa tgcacttttg
241 aagcacagat ttgaaataat agagggaaga gatcgcacaa tggcctggac agtagtaaac
301 agtatttgca acaccacagg agctgagaaa ccgaagtttc tgccagattt gtatgattac
361 aaggagaata gattcatcga gattggagtg acaaggagag aagtccacat atactatctt
421 gaaaaggcca ataaaattaa atctgagaat acacacatcc acattttctc attcactggg
481 gaagaaatgg ccacaaaggc cgactacact ctcgatgagg aaagcagggc taggatcaaa
541 accagactat tcaccataag acaagaaatg gccaacagag gcctctggga ttcctttcgt
601 cagtccgaaa gaggcgaaga aacaattgaa gaaagatttg aaatcacagg gacaatgcgc
661 aggcttgccg accaaagtct cccgccgaac ttctcctgcc ttgagaattt tagagcctat
721 gtggatggat tcgaaccgaa cggctacatt gagggcaagc tttctcaaat gtccaaagaa
781 gtaaatgcaa aaattgaacc ttttctgaaa acaacaccaa gaccaattag acttccggat
841 gggcctcctt gttttcagcg gtccaaattc ctgctgatgg atgctttaaa attaagcatt
901 gaggacccaa gtcacgaagg ggagggaata ccactatatg atgcgatcaa gtgcatgaga
961 acattctttg gatggaaaga accctatatt gttaaaccac acgaaaaggg aataaatcca
1021 aattatctgc tgtcatggaa gcaagtactg gcggaactgc aggacattga gaatgaggag
1081 aagattccaa gaactaaaaa catgaagaaa acgagtcagc taaagtgggc acttggtgag
1141 aacatggcac cagagaaggt agactttgac aactgtagag acataagcga tttgaagcaa
1201 tatgatagtg acgaacctga attaaggtca ctttcaagct ggatccagaa tgagttcaac
1261 aaggcatgcg agctgaccga ttcaatctgg atagagctcg atgagattgg agaagacgtg
1321 gctccaattg aacacattgc aagcatgaga aggaattact tcacagcaga ggtgtcccat
1381 tgcagagcca cagaatatat aatgaagggg gtatacatta atactgcctt gcttaatgca
1441 tcctgtgcag caatggacga tttccaacta attcccatga taagcaagtg tagaactaaa
1501 gagggaaggc gaaagaccaa tttatatggt ttcatcataa aaggaagatc tcacttaagg
1561 aatgacaccg acgtggtaaa ctttgtgagc atggagtttt ctctcactga cccgagactt
1621 gagccacaca aatgggagaa gtactgtgtc cttgagatag gagatatgct actaagaagt
1681 gccataggcc agatgtcaag gcctatgttc ttgtatgtga ggacaaatgg aacatcaaag
1741 attaaaatga aatggggaat ggagatgagg ccttgcctcc ttcagtcact acaacaaatc
1801 gagagtatgg ttgaagccga gtcctctgtc aaagagaaag acatgaccaa agagtttttt
1861 gagaataaat cagaaacatg gcccattggg gagtccccca aaggagtgga agaaggttcc
1921 attgggaagg tctgcaggac tttattagcc aagtcggtat tcaatagcct gtatgcatcc
1981 ccacaattag aaggattttc agctgaatca agaaaactgc ttcttgtcgt tcaggctctt
2041 agggacaatc ttgaacctgg aacctttgat cttggggggc tatatgaagc aattgaggag
2101 tgcctgatta atgatccctg ggttttgctt aatgcgtctt ggttcaactc cttcctaaca
2161 catgcattaa gatagttgtg gcaatgctac tatttgctat ccatactgtc caaaaaagta
2221 ccttgtttct act
//
