LOCUS NC_010297 1338 bp DNA circular VRL 13-AUG-2018
DEFINITION Cardiospermum yellow leaf curl virus satellite DNA beta, complete
genome.
ACCESSION NC_010297
VERSION NC_010297.1
DBLINK BioProject: PRJNA485481
KEYWORDS RefSeq; complete genome.
SOURCE Cardiospermum yellow leaf curl betasatellite
ORGANISM Cardiospermum yellow leaf curl betasatellite
Viruses; Viruses incertae sedis; Tolecusatellitidae; Betasatellite.
REFERENCE 1
AUTHORS Salim,N. and Stanley,J.
TITLE Characterisation of Cardiospermum yellow leaf curl virus
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1338)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2008) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1338)
AUTHORS Stanley,J.
TITLE Direct Submission
JOURNAL Submitted (17-JAN-2008) Stanley J., Department of Disease and
Stress Biology, John Innes Centre, Colney Lane, Norwich, NR4 7UH,
UNITED KINGDOM
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to AM933578.
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..1338
/organism="Cardiospermum yellow leaf curl betasatellite"
/mol_type="genomic DNA"
/isolation_source="Cardiospermum microcarpum"
/db_xref="taxon:497865"
/collection_date="Oct-2004"
/collected_by="Nazeera Salim"
gene complement(267..620)
/gene="beta-C1"
/locus_tag="CaYLCVb_gp1"
/db_xref="GeneID:5867169"
CDS complement(267..620)
/gene="beta-C1"
/locus_tag="CaYLCVb_gp1"
/codon_start=1
/product="beta-C1 protein"
/protein_id="YP_001661327.1"
/db_xref="InterPro:IPR018583"
/db_xref="UniProtKB/TrEMBL:B0JEU4"
/db_xref="GeneID:5867169"
/translation="MPITKKTSSGKLLQLSVNVFDSKFIVLLHITDTKSPQIQLQKIK
LPYSFNSDDLLINVTGLEEELMQHLSLICDEHVPSKVYTDYLISAIDILILENSQELG
LQVLEPCVVTITYTV"
misc_feature complement(270..611)
/gene="beta-C1"
/locus_tag="CaYLCVb_gp1"
/note="Beta-satellite pathogenicity beta C1 protein;
Region: Pathogen_betaC1; pfam09593"
/db_xref="CDD:401507"
ORIGIN
1 acagagggcg agttggagct cagaggcgaa gtgggcccca caaagaaggt aaaacataaa
61 caaatggtca aatctgaatt tgaccattct aattgaagta ttaatgcact atttgtcatt
121 tgttattagt caattatcgt tatttagtag atttggattt tagtttagtt ctagatgatt
181 agttattagg aggtaataca aaattaaata tatatattag gatgacgaat agtaaaagga
241 tttaattaat taaaacagaa agatagttat acagtataag ttatggttac aacacaaggt
301 tcaagaactt gcaggccaag ttcttgagag ttctctaata tcagaatatc tatggcgctg
361 atcaggtaat ctgtgtagac cttgcttggg acatgttcat cacagataag ggaaagatgc
421 tgcatcaatt cctcttctag cccagtcaca ttaatgagga gatcatcact gttgaagctg
481 tatggtagtt tgatcttttg tagttgaatt tgaggagatt ttgtatctgt aatatgtagt
541 aaaactataa actttgaatc aaaaacattg acagatagct gtagaagttt gcctgaagaa
601 gtttttttag taataggcat tatagatatt gtgtgattaa aataataaga agtgcttgtt
661 tatatagtat gtagttgaat aagatgtatt caaaatatct agatattttg attaatagaa
721 ataaagaaga aagaggatag aaacaaagaa gaaatcttat gtgaatctaa tggccacgca
781 gtggaataga caggactaga aaaaacaggg aggaagaagg agaaagaacg tgagcaagga
841 aaaagaaatc tgataatatc tagatattat cagaggagaa aaagaaaaaa atatggactg
901 aatgaagaaa ggggtcttta tataaataac taaagatctg ggctctaatg gaaatatatg
961 tgtttagttt tatttgcagt taaaacttgt tttaactgag taggtggtat atatttactg
1021 cagggtgaaa ggtataggaa ggtaggtaat ttgatcccca atatccccga ttgagccccc
1081 aatatattgg ggtctcaaat gggagctctt ttctggcttt taccgttttg ccctcatccc
1141 tgttctttgg aaggcgcgtg ggtgcgctgc aaaagttaga ctttctctct cccaaaaact
1201 aaaaatccgg tcgaaacccc tcttccggtc atcaattcac gacacgcgcg gcggtgtgta
1261 cccctgggag ggtcgaaacc actacgctac gcagcagcct tagctacgcc ggagcttagc
1321 tcgccctctt ataatatt
//