LOCUS       NC_014518               1026 bp    RNA     linear   VRL 13-AUG-2018
DEFINITION  Rotavirus D chicken/05V0049/DEU/2005 segment 8, complete genome.
ACCESSION   NC_014518
VERSION     NC_014518.1
DBLINK      BioProject: PRJNA485481
KEYWORDS    RefSeq.
SOURCE      Rotavirus D chicken/05V0049/DEU/2005
  ORGANISM  Rotavirus D chicken/05V0049/DEU/2005
            Viruses; Riboviria; Orthornavirae; Duplornaviricota;
            Resentoviricetes; Reovirales; Sedoreoviridae; Rotavirus; Rotavirus
            D.
REFERENCE   1  (bases 1 to 1026)
  AUTHORS   Trojnar,E., Otto,P., Roth,B., Reetz,J. and Johne,R.
  TITLE     The genome segments of a group D rotavirus possess group A-like
            conserved termini but encode group-specific proteins
  JOURNAL   J. Virol. 84 (19), 10254-10265 (2010)
   PUBMED   20631147
REFERENCE   2  (bases 1 to 1026)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-SEP-2010) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1026)
  AUTHORS   Trojnar,E., Otto,P., Roth,B., Reetz,J. and Johne,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-FEB-2010) Food Hygiene and Safety Concepts, Federal
            Institute for Risk Assessment, Diederdorfer Weg 1, Berlin 12277,
            Germany
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence is identical to
            GU733450.
            GenBank Accession Numbers GU733443-GU733453 represent the complete
            genome of Rotavirus D strain 05V0049.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Rotavirus D chicken/05V0049/DEU/2005"
                     /mol_type="genomic RNA"
                     /strain="05V0049"
                     /host="chicken"
                     /db_xref="taxon:884200"
                     /segment="8"
                     /country="Germany"
                     /collection_date="2005"
     gene            50..982
                     /locus_tag="RV-Ds8_gp1"
                     /db_xref="GeneID:9742367"
     CDS             50..982
                     /locus_tag="RV-Ds8_gp1"
                     /codon_start=1
                     /product="NSP2"
                     /protein_id="YP_003896053.1"
                     /db_xref="GeneID:9742367"
                     /translation="MAELGCFVNVVESDSTFTFIPIKSKAINILLTTKNDDDNPIDTI
                     IYGLTPVPKYKRRFASDMSPSGINYDNELFDKVAIKLAEILNFGVKKMSVQQAMMMLT
                     RVFSVRHLESLYYRMMDEDDIIHDNIDLQFKSVMVMLKLTKSFELTLTAEGGKLLYVD
                     KTYALWELDYRKYKLMPVKAVEYKITLNSATEDADSERKMAAYVKYHYNRFAVISHGF
                     GHYRLVPYQQVLNHAERTFATYNAIKKTKSDHSFVRLSKTLLNTNWQDFMNAVEYGKS
                     MSECRNELFKSSKTSNPVKKHVNILQLDEMSTVN"
     misc_feature    50..976
                     /locus_tag="RV-Ds8_gp1"
                     /note="Rotavirus non-structural protein 35; Region:
                     Rota_NS35; pfam02509"
                     /db_xref="CDD:396869"
ORIGIN      
        1 ggtttttaaa agtttacagg ccgtcggagg tttgcagtta ctccttgcaa tggcggagct
       61 gggctgcttc gtaaatgtgg ttgaatctga ttcgacgttt acattcattc caataaaatc
      121 aaaagctatt aatatattgc tcacaacgaa aaatgatgat gacaatccaa ttgatactat
      181 tatttatggt ctaacgccgg tcccaaagta taaaagaaga tttgcatctg acatgagtcc
      241 atcaggtatt aattatgata atgaattatt cgataaagtt gctattaaat tagcggagat
      301 tctgaatttt ggggttaaaa aaatgtcagt acagcaagca atgatgatgc taacaagagt
      361 gttttcagtt agacatctgg aatcattgta ctatagaatg atggacgaag atgatataat
      421 tcatgataat attgatctac aattcaaatc agttatggtg atgctgaagt taaccaaatc
      481 gttcgaattg actctaactg ctgaaggggg gaaattactt tatgttgata aaacttatgc
      541 actttgggaa ctagactata gaaagtataa actgatgcct gttaaagctg ttgaatataa
      601 aataacttta aattccgcaa cagaagatgc ggatagtgaa aggaaaatgg ctgcatatgt
      661 taaataccat tataatagat ttgctgtaat atcacatgga tttggtcatt atagactagt
      721 tccctatcag caggtactaa atcatgctga acgtactttt gcgacatata atgcaatcaa
      781 aaagacgaaa tctgatcact catttgtgcg actttctaaa actttgttga atacaaattg
      841 gcaagatttt atgaatgctg ttgaatatgg aaaaagcatg agtgaatgta ggaatgaatt
      901 atttaagtca tcaaaaacga gtaatccagt caagaagcac gtcaatatac tgcaactgga
      961 tgaaatgtcc actgtgaatt agatcggcca cgaggcaacg ccaaaaaata aacttttaat
     1021 gtgacc
//