LOCUS       NC_014519               1025 bp    RNA     linear   VRL 13-AUG-2018
DEFINITION  Rotavirus D chicken/05V0049/DEU/2005 segment 9, complete genome.
ACCESSION   NC_014519
VERSION     NC_014519.1
DBLINK      BioProject: PRJNA485481
KEYWORDS    RefSeq.
SOURCE      Rotavirus D chicken/05V0049/DEU/2005
  ORGANISM  Rotavirus D chicken/05V0049/DEU/2005
            Viruses; Riboviria; Orthornavirae; Duplornaviricota;
            Resentoviricetes; Reovirales; Sedoreoviridae; Rotavirus; Rotavirus
            D.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Trojnar,E., Otto,P., Roth,B., Reetz,J. and Johne,R.
  TITLE     The genome segments of a group D rotavirus possess group A-like
            conserved termini but encode group-specific proteins
  JOURNAL   J. Virol. 84 (19), 10254-10265 (2010)
   PUBMED   20631147
REFERENCE   2  (bases 1 to 1025)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-SEP-2010) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1025)
  AUTHORS   Trojnar,E., Otto,P., Roth,B., Reetz,J. and Johne,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-FEB-2010) Food Hygiene and Safety Concepts, Federal
            Institute for Risk Assessment, Diederdorfer Weg 1, Berlin 12277,
            Germany
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence is identical to
            GU733451.
            GenBank Accession Numbers GU733443-GU733453 represent the complete
            genome of Rotavirus D strain 05V0049.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Rotavirus D chicken/05V0049/DEU/2005"
                     /mol_type="genomic RNA"
                     /strain="05V0049"
                     /host="chicken"
                     /db_xref="taxon:884200"
                     /segment="9"
                     /country="Germany"
                     /collection_date="2005"
     gene            44..994
                     /locus_tag="RV-Ds9_gp1"
                     /db_xref="GeneID:9742365"
     CDS             44..994
                     /locus_tag="RV-Ds9_gp1"
                     /codon_start=1
                     /product="VP7"
                     /protein_id="YP_003896054.1"
                     /db_xref="GeneID:9742365"
                     /translation="MTRCSLHMHNYLVNSLICLILVLLIKRVVNWLFYMLKSLTMDLV
                     IIALALSLVAPTTYANDCVDDSLADYKYNTICMFHPDITESDWQNILNQLLLSKGIPL
                     GSMIYVKYTSIEEIITGDKFYCDYNIVLVDASSYTNDQYSNLDQVVDMLMYNYDCINM
                     DVNLYYYSQQKDELWLASGSCEVKVCPLNQQTLGIGCNIADSSTYATLTTANDKFEII
                     DVINDINYKINITTTSCSIKRCYKQSERTNVAVIQIGGYNVYDISESPVTYRSNNRLM
                     RVNWKKWWAIFYQIVDFVNDILTTMVRQSHNNGIYRVVRQ"
     misc_feature    125..958
                     /locus_tag="RV-Ds9_gp1"
                     /note="Glycoprotein VP7; Region: VP7; pfam00434"
                     /db_xref="CDD:425679"
ORIGIN      
        1 ggcatttaaa ggcatcttaa ccatatagga gtgacgcacc tatatgacta gatgttcact
       61 acatatgcat aactatcttg tgaacagttt gatttgctta attttggttt tgttaattaa
      121 aagagtagta aattggttat tctatatgtt gaagtcatta acaatggatc tggttattat
      181 tgcattggca ttatcattag tagcaccaac cacatatgca aatgattgcg ttgatgattc
      241 tttggctgat tataaatata atacaatttg tatgttccat ccagatataa cagaatcaga
      301 ttggcagaat atacttaatc aactgctgct ttcaaaaggt ataccattag gttcaatgat
      361 atatgttaaa tatacatcaa tagaagaaat aataacagga gataaattct actgtgatta
      421 taatattgtt ctagttgatg ctagctctta tactaatgat cagtattcaa atctagacca
      481 ggtagtggat atgctaatgt ataattatga ttgtataaat atggacgtga atttatatta
      541 ttattctcaa caaaaagatg aattatggtt ggcttcagga tcatgtgaag ttaaagtatg
      601 tccattgaat caacaaacgt taggtattgg ttgtaatatc gctgactcat caacttatgc
      661 tacattgacg acggcaaatg ataaatttga aataatagat gtaataaacg acataaatta
      721 taaaattaat attactacaa catcatgtag tattaaacga tgttataaac aaagtgagag
      781 aactaatgtt gctgtaatac aaattggagg ttataatgta tatgatatat cagaatcacc
      841 agttacttat agatcgaata atcgattaat gagagtgaat tggaagaagt ggtgggctat
      901 attttatcaa atagtagatt ttgtaaatga tattctaaca actatggtaa gacaatcaca
      961 taataatgga atctacagag tggttcgcca atagttatga tatgagtgtt tactttaata
     1021 tgacc
//