LOCUS NC_014523 2794 bp RNA linear VRL 13-AUG-2018
DEFINITION Great Island virus segment 2, complete genome.
ACCESSION NC_014523
VERSION NC_014523.1
DBLINK BioProject: PRJNA485481
KEYWORDS RefSeq.
SOURCE Great Island virus (GIV)
ORGANISM Great Island virus
Viruses; Riboviria; Orthornavirae; Duplornaviricota;
Resentoviricetes; Reovirales; Sedoreoviridae; Orbivirus.
REFERENCE 1 (bases 1 to 2794)
AUTHORS Belhouchet,M., Mohd Jaafar,F., Tesh,R.B., Grimes,J., Maan,S.,
Mertens,P.P.C. and Attoui,H.
TITLE Complete sequence of Great Island virus and comparison with the T2
and outer-capsid proteins of Kemerovo, Lipovnik and Tribec viruses
(genus Orbivirus, family Reoviridae)
JOURNAL J. Gen. Virol. 91 (12), 2985-2993 (2010)
PUBMED 20739272
REFERENCE 2 (bases 1 to 2794)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (18-NOV-2010) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2794)
AUTHORS Belhouchet,M., Mohd Jaafar,F., Mertens,P.P.C. and Attoui,H.
TITLE Direct Submission
JOURNAL Submitted (14-JUN-2010) Vector-Borne Diseases, Institute for Animal
Health, Ash Road, Woking, Surrey GU24 0NF, United Kingdom
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to HM543466.
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..2794
/organism="Great Island virus"
/mol_type="genomic RNA"
/isolate="CanAr 42"
/db_xref="taxon:204269"
/segment="2"
/country="Canada"
gene 19..2745
/locus_tag="GIV_s2_gp1"
/db_xref="GeneID:9970135"
CDS 19..2745
/locus_tag="GIV_s2_gp1"
/note="subcore shell T2 protein"
/codon_start=1
/product="VP2"
/protein_id="YP_003896059.1"
/db_xref="GeneID:9970135"
/translation="MANPQNRVQTERQQSNSSPYLRGDEVHDDPGIALSVFALQEIIR
KVRESQTSLRNEGREVNPAPPEIEQIFSALSDLRDERPYRIERRLPTYYRFESSQSQE
RFFRVDSHFERIAAPVDNTTLEEPARLMSLVLARVDTIREAGSFLLYNAPTHFIDGRE
IIDADGLGVDVSGLLRLVEPRVRHLLQRQIDQLTVLNQDQEDTMVDTYPGACPDAVFR
VHRALTAHVVHHQRDDYRNAMQWLQAYGEYKRIDFSRSLLTDVFSPDTVYIQSYQLPA
NPQLLWEVPRCGIPNLVLNAALGVPQGTYITPNPRITSITIASRVTTTTSFAQLLGTI
PTAAQMDDVRKIYLALMFPNQILLDIRSEPGHQVDVVAQSVAGVLGKLLFSYGPALFN
ITPHTARALDRACASFLQMATDDRRTIRHGPSGRPLDFVITQGQRAFDCNQLAQNPAR
GNGYAGWGVDAVGDHPTPYPHVRRRIQYLGYVPEDVIDERFCGDDLRYPLHETMCEAL
AISGHVNERNYVEMMRQHHVVRFAHLSQVINRDLVSAFSLPDERFNMLAAGVPRDATG
PDGPLVLDISYMAIIHAFRLRFLPVSRPERIVYQPMLESVYASHLSLAKLHANNLQTF
VTANSESFVEARPLDTWRAVYPRLPEPVRQIFDLTGQHSFVTGRDIGLWLRSPLVQDS
LFLLCARTAWQAVDDPADIGFTRDVYIHRQPAPEYPLEDVRQFRRDAVYFTNMLEARP
ANGNRVILDRVIMQQRAGAGRLRMSIRELLDDGLFVQIGSALRPITLSIHHGLPPEET
LRALPFEYRRESANGPTARVTLQMLRPVSAFFMLYNADEQAFPDEMIDLVPKMSLVSL
YVQQPPVERVSYDTALSVINRDFVSFRSRVRLMDLSAAFDAGSQYALPSNAM"
misc_feature 67..2733
/locus_tag="GIV_s2_gp1"
/note="Orbivirus VP3 (T2) protein; Region: Orbi_VP3;
pfam01700"
/db_xref="CDD:279964"
ORIGIN
1 gtaaaacttc tgggagcgat ggcaaatccg caaaatcgag tgcaaacaga aagacagcag
61 agcaacagct caccatatct aagaggcgat gaagtacacg acgaccctgg aatcgcattg
121 tctgtcttcg ccctacaaga gatcatccga aaagtccgag agtcacagac ttcactgcgc
181 aatgaggggc gtgaggtcaa ccccgcgccc cccgagattg agcaaatctt ttcggcgctg
241 agcgacctgc gcgatgagag accctatcga atagaacgga ggctacccac gtattacaga
301 ttcgagtcgt ctcaatcgca ggagcgtttc ttccgagtgg atagccactt cgaaaggatc
361 gccgcaccag ttgataacac gactctggag gagccagcca ggctgatgtc tttagtgctt
421 gcgcgggtag acaccatacg cgaggccgga tctttcctcc tttacaacgc gcctacgcac
481 ttcattgatg gacgtgaaat aatcgacgcc gacggcttag gcgttgacgt ctccggtctg
541 ctccgccttg tcgagccgag agttcgtcac ctgctgcaga gacagataga ccagctgacc
601 gtcctgaatc aggaccagga ggacaccatg gtggatacct accctggcgc atgccccgac
661 gctgttttcc gagtgcaccg cgctctcaca gcccacgtgg tgcatcacca gcgggatgat
721 tacagaaacg cgatgcaatg gctgcaggcc tacggagagt acaagcgtat agacttctcg
781 cgatcgctgc tcacagacgt attttcccct gacacggttt acattcagag ttaccagctg
841 cccgccaacc cgcagctcct atgggaggta ccgcggtgcg gaatcccaaa tcttgtgttg
901 aatgcggcgc tcggcgtgcc acaaggaacg tatattacgc ccaacccaag gatcacgtcg
961 atcacgatcg cttcgcgtgt cacaactacc acctcgtttg cgcagttgct cgggaccatt
1021 cccaccgcgg cccagatgga tgacgtgcga aagatctatc tagcgttgat gttcccgaac
1081 cagatcctgc tcgacattag atcggagccc ggacatcagg ttgatgttgt cgcgcagtcc
1141 gtcgcagggg tcttgggtaa gttgctcttc tcttatggac cagcactgtt caacattacc
1201 ccccacacgg ccagagctct tgaccgcgcc tgcgcttctt ttctgcaaat ggcgacagac
1261 gacaggcgca ccatccgcca tgggccctca gggcgacctc tcgactttgt catcacgcag
1321 ggacagcgtg cgttcgactg caaccagctc gcccagaacc ccgctcgggg caacggttat
1381 gcgggctggg gagttgacgc cgtgggtgac catccgactc cgtacccgca tgtgagacgt
1441 cgtattcagt atctcggcta tgtcccagaa gatgtaatcg atgagaggtt ctgcggcgac
1501 gacctgcgct acccgcttca tgaaacgatg tgcgaggctc tagcgatctc gggtcacgta
1561 aacgagagga actacgttga gatgatgcgg cagcatcacg tcgtgagatt cgcgcatctc
1621 agccaagtta tcaatcggga cctcgtatcc gccttttccc taccggatga gagattcaac
1681 atgctcgcgg cgggcgtccc acgggatgcc accggaccgg atggaccgct cgtgctcgac
1741 ataagctaca tggctatcat acacgcgttc cgcctgcgct ttctcccagt ctccaggcca
1801 gagcgtattg tctatcagcc catgctcgaa tccgtctacg cctcccacct ctcactggca
1861 aaacttcacg cgaacaattt acagacgttt gtcacagcaa actcggagag cttcgtggag
1921 gcgcggcctc tggacacttg gagggccgtc tatccccgct tgcccgagcc cgtccgccaa
1981 atttttgacc tcacaggtca gcattcgttc gtgacgggac gtgacatcgg attatggctg
2041 cgctcacccc tggtacagga ttcgctcttc ctgctgtgcg ctcgaacggc ttggcaggca
2101 gtggacgacc ctgcggacat cggctttacg cgcgacgtct acattcaccg ccagccagct
2161 ccggaatacc cgttggagga cgtgcgccaa ttccgacgag acgcggtcta tttcacgaat
2221 atgctggagg cgcgaccagc aaacggcaat cgagtgatcc tggaccgggt aatcatgcag
2281 cagcgagctg gggcgggacg tctacggatg tctatccgcg aactactcga cgacggcttg
2341 tttgtgcaaa tcggatcagc cctgcgaccg attactctga gcattcatca cggactgccg
2401 ccggaggaga ccctgcgcgc cttacccttc gaatatcgtc gcgagagtgc gaacggccct
2461 acggcacgtg tcacccttca gatgctccgg cccgtttccg ccttcttcat gctgtacaac
2521 gcggacgaac aggcgttccc cgacgagatg atcgacctcg tccctaagat gtcactcgtg
2581 agcctatacg tacaacagcc ccccgtggag cgcgtcagtt acgacacggc gctgagcgtc
2641 ataaatcgcg actttgtttc gttccgatct cgcgtgcgcc tgatggattt gtcagctgca
2701 ttcgatgcgg ggagccagta tgctcttccc tctaacgcga tgtagggatt cagccccccg
2761 cgcgttgcgt gaacagggcc agggtgcaag atac
//
