LOCUS       NC_015130               2158 bp    RNA     linear   VRL 13-AUG-2018
DEFINITION  Avian orthoreovirus segment M2, complete genome.
ACCESSION   NC_015130
VERSION     NC_015130.1
DBLINK      BioProject: PRJNA485481
KEYWORDS    RefSeq.
SOURCE      Avian orthoreovirus
  ORGANISM  Avian orthoreovirus
            Viruses; Riboviria; Orthornavirae; Duplornaviricota;
            Resentoviricetes; Reovirales; Spinareoviridae; Orthoreovirus.
REFERENCE   1
  AUTHORS   Banyai,K., Dandar,E., Dorsey,K.M., Mato,T. and Palya,V.
  TITLE     The genomic constellation of a novel avian orthoreovirus strain
            associated with runting-stunting syndrome in broilers
  JOURNAL   Virus Genes 42 (1), 82-89 (2011)
   PUBMED   21116842
REFERENCE   2  (bases 1 to 2158)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-FEB-2011) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 2158)
  AUTHORS   Banyai,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-SEP-2010) Banyai K., Hungarian Academy of Sciences,
            Veterinary Medical Research Institute, Hungaria krt. 21., Budapest,
            H-1143, HUNGARY
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to FR694195.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2158
                     /organism="Avian orthoreovirus"
                     /mol_type="genomic RNA"
                     /strain="AVS-B"
                     /db_xref="taxon:38170"
                     /segment="M2"
                     /country="USA"
     gene            30..2060
                     /gene="mu-B"
                     /locus_tag="AOrVsM2_gpp1"
                     /db_xref="GeneID:10220425"
     CDS             30..2060
                     /gene="mu-B"
                     /locus_tag="AOrVsM2_gpp1"
                     /codon_start=1
                     /product="mu-B protein"
                     /protein_id="YP_004226525.1"
                     /db_xref="GeneID:10220425"
                     /translation="MGNATSVVQNFNIQGDGNHFAPSAETTSSAVPSLSLNPGLLNPG
                     GKAWTLIDASLNASDPSSLRLMTSADLSTLSQSAVGNSTGFLPTSGMYALTTKETLSV
                     VTDHAIAQFEKLQMACELDRDYLDARGVSPESVNIHNYIVYVDCFVGVSARQAASNFQ
                     QRVPVITKSRMTQFMTSAQNILQVLGPWERDIRELLTIIPTSTTAGKLSCDMRSVVSF
                     VDSQLSDTSLCRLYPECAAAAVARRNGGIRWKQADSDEAPSLATNDIAASTMGALANT
                     TPLSEKSNSGEESMRLVNDVGVDIMSSRGPISSSVWSRTVEPKSYNIRTLRVEEALWL
                     RESQATAGFDVSYTLPDQTTQKHFWLQKGSTVINLEQTGSMMFEVNVSGKDYKKGSFD
                     PDNHKLVLLVMQSKIPFESWTGASQIDGIAQVAEVTVHAADSSTPSRKIIGETSLSYL
                     FERETVTTANTEVNTYLLCTWQLDDAQSNGDNAWPDAWDAITTLTSLTSGTVTIKGTS
                     VDSVTPVDLVGAYTPEALSAALPNDAGLILADKATKLANAIKKEDDSVIDESSPFSTP
                     IQGVLAVQQLDTVGTRGVRTIQPPAFLKRVASRALHMFLGDPHSILKQTTPVLKDPEV
                     WTGFIQGVRDGIRTKSLSAGVRSVYNNVTATQSVQTWKQGFLTKIQTLFKPS"
     misc_feature    33..2048
                     /gene="mu-B"
                     /locus_tag="AOrVsM2_gpp1"
                     /note="Reovirus major virion structural protein Mu-1/Mu-1C
                     (M2); Region: Reovirus_M2; pfam05993"
                     /db_xref="CDD:283614"
ORIGIN      
        1 gctttttcag tgcctatctt tctcacaaca tgggtaacgc gacgtctgta gtacagaact
       61 ttaacatcca aggtgatggc aatcactttg caccttcagc cgaaaccaca tcatccgctg
      121 taccctccct ttcattaaat cctggtttgc tcaatcccgg cggcaaagct tggactttga
      181 ttgacgcgtc tctcaatgca tcggatccat cttccctgcg gttaatgact tcggctgatc
      241 tgtctacgct gtcccaatct gctgttggta attctactgg attcctacca acttcgggca
      301 tgtatgctct gaccactaag gagacattaa gtgttgtgac ggatcatgct atagcacagt
      361 ttgaaaaatt gcagatggcc tgtgagttag atcgtgatta tttggatgct cgcggcgtat
      421 cacctgaatc tgttaacatc cataactata tagtgtatgt cgactgtttc gtgggcgttt
      481 ctgctcgcca agccgcatca aacttccaac aacgtgtgcc agttataacc aaatccagga
      541 tgactcaatt catgacatcc gcacagaata ttctacaggt acttggtccc tgggagcgtg
      601 atattcgtga attgcttact atcataccca cttctactac cgctggcaag ttatcatgtg
      661 acatgaggtc agtagttagt ttcgtcgata gtcagctatc agatacgagt ttgtgccgcc
      721 tctacccaga atgtgctgca gcagccgtgg ctagaaggaa tggtggaata cgttggaagc
      781 aggctgatag tgatgaagcc ccttctcttg ctactaatga catagctgct tcaacgatgg
      841 gagcccttgc taatactact cctctctcgg agaagtctaa ttccggcgaa gagtccatgc
      901 gtctagtgaa tgatgtgggc gtagacatta tgagctcccg aggccccatt agttcctccg
      961 tgtggtcccg tactgttgaa cctaaatctt acaatattag gacacttcgt gtggaagaag
     1021 cgttatggct gcgtgagagt caggctactg ctggtttcga cgtctcatac actctgcctg
     1081 atcaaactac ccagaagcat ttttggctgc agaaaggctc tactgtgatc aatcttgagc
     1141 aaactggtag tatgatgttc gaagtaaacg tgtctggcaa ggattacaag aaaggctctt
     1201 tcgatcctga taatcataag ttggttcttc ttgtgatgca atccaagata ccctttgaat
     1261 cttggacagg ggcgtcccaa attgatggta ttgcacaagt agccgaggtg acagtgcacg
     1321 cagctgatag ttctacgcct agccgtaaga tcatagggga gacgtcacta tcctacttgt
     1381 ttgagagaga aacggttacc accgccaaca ctgaggttaa cacttacctc ctatgcacgt
     1441 ggcagcttga tgacgcacaa agtaatggcg acaatgcgtg gcccgacgca tgggatgcaa
     1501 tcactacctt gacgtcatta acttcgggaa ctgtgacgat taaagggaca tccgtagatt
     1561 ccgtcactcc ggttgattta gttggagctt atacacctga agccctttcc gcagcccttc
     1621 caaacgatgc cggccttata ctcgcggata aagctacgaa gctggctaat gccattaaga
     1681 aggaagatga ttctgttatt gatgaatcgt caccttttag tactccgatt caaggtgtgt
     1741 tagcggttca gcaactggac accgttggta cacgaggtgt acgaacgatt cagcccccag
     1801 cgtttctaaa acgtgttgcc tctcgagctt tgcatatgtt tctgggtgat ccccattcta
     1861 tcctcaagca aactacgcct gtgctaaaag atcctgaagt ctggactgga ttcattcaag
     1921 gcgtgcgaga tggcatccgt actaaatcat tgtccgcggg agtgagatct gtttataata
     1981 acgtcaccgc aacacagtcc gttcaaacgt ggaagcaggg gtttctgact aaaatacaga
     2041 cgttgttcaa accatcgtga ggtgctaagg cctctctccg cggcgggtcg gtgggcacgt
     2101 cgtggtgatg ctgaatgcac gggggggtga cgccctctgg attggcacgt tactcatc
//