LOCUS NC_015131 1996 bp RNA linear VRL 13-AUG-2018
DEFINITION Avian orthoreovirus segment M3, complete genome.
ACCESSION NC_015131
VERSION NC_015131.1
DBLINK BioProject: PRJNA485481
KEYWORDS RefSeq.
SOURCE Avian orthoreovirus
ORGANISM Avian orthoreovirus
Viruses; Riboviria; Orthornavirae; Duplornaviricota;
Resentoviricetes; Reovirales; Spinareoviridae; Orthoreovirus.
REFERENCE 1
AUTHORS Banyai,K., Dandar,E., Dorsey,K.M., Mato,T. and Palya,V.
TITLE The genomic constellation of a novel avian orthoreovirus strain
associated with runting-stunting syndrome in broilers
JOURNAL Virus Genes 42 (1), 82-89 (2011)
PUBMED 21116842
REFERENCE 2 (bases 1 to 1996)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (11-FEB-2011) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1996)
AUTHORS Banyai,K.
TITLE Direct Submission
JOURNAL Submitted (29-SEP-2010) Banyai K., Hungarian Academy of Sciences,
Veterinary Medical Research Institute, Hungaria krt. 21., Budapest,
H-1143, HUNGARY
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to FR694196.
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..1996
/organism="Avian orthoreovirus"
/mol_type="genomic RNA"
/strain="AVS-B"
/db_xref="taxon:38170"
/segment="M3"
/country="USA"
gene 25..1932
/gene="mu-NS"
/locus_tag="AOrVsM3_gpp1"
/db_xref="GeneID:10220427"
CDS 25..1932
/gene="mu-NS"
/locus_tag="AOrVsM3_gpp1"
/codon_start=1
/product="mu-NS protein"
/protein_id="YP_004226526.1"
/db_xref="GeneID:10220427"
/translation="MASTKWGDKPMSLSMSHDGSSIRSAASQFLSVPLSHSTPIPPQR
KTVLLKFMIGDDLVTVQGALAPFDEYWYDNQPLLAQAVEMLASEDRLRQFEHYEKFLL
KKGHQIAEIMNRLRLFFTDVLKVKMEAEALPALAQYLMVGTLEAVSTAHSPDACVPVT
SKVVTKQQTIAKSPGRLDEEEYNVIRSRFLTHEVFDLTSDLPGVQPFMDMYYATVPRA
DSTGWCVYRRKGLLIHSPDEQFSDLTIFSTRLTASHELQLVAGDVVVACFDLMDVSDI
APSHHASVQEERTLGTSKYSNITANDHPLVFFSPSALRWAIDHACTDSLVSTRNIRVC
VGIDPLVTRWTRDGVQEAAILMDDKLPSAGRARMALRTLLLARRSPMPSFLLGALKQS
GGQLLEHYRCDAANRYGSPTVPMSHPPPCSKCPELKEQITKLSSSPTPKIDSTTGPAA
LLSKISDLQRANRELSLKLVDMQPAREDHLLSYLNEHVCVNARDHEKGLLSRCNVSNE
SISSILDQRMKNRERFETRLRHEASAEWEPRVEALNQELAKARVEQQDMMTQSLQYLN
ERDELLHEVDELKRELTTLRAANVRLNADNHRMSRATRVGDAFVSDIEPLPSGIPGES
KPSMEELVDDL"
ORIGIN
1 gctttttgag tcctagcgtg gatcatggcg tcaaccaagt ggggagacaa gccgatgtcg
61 ctctcaatgt ctcacgatgg atcatctatc cgcagtgctg cctcacagtt tttgtcggtc
121 cctctgtctc actcaacgcc tatcccacct caacggaaga ccgtgctgtt gaaatttatg
181 attggcgatg atctggttac cgttcagggt gccctcgccc cgtttgatga gtattggtac
241 gataaccaac ctctgctagc tcaggctgtt gagatgcttg cttctgaaga tcgtttacgt
301 caattcgagc attatgagaa atttctactc aagaaaggtc atcagatagc tgagattatg
361 aacaggttac gcctcttttt cacagacgtt cttaaagtta agatggaagc tgaggcttta
421 cctgctttag ctcaatatct aatggttgga accttagagg ctgtttctac tgctcattca
481 cctgatgctt gtgttccagt tacctcaaag gtcgtgacta agcagcagac tattgctaaa
541 tctcctggcc gtctcgatga ggaggaatac aacgttattc gatcgcgttt cctgacgcac
601 gaggtttttg atctgacgtc cgacttaccc ggagtgcaac ctttcatgga tatgtactac
661 gctaccgtcc ctcgcgccga ttcgacagga tggtgtgtgt accgtcgcaa gggcttactc
721 attcactctc ctgatgagca attctcagat ctgactatct tctctacacg tcttacggct
781 tcgcatgagt tgcagctcgt ggctggagat gtcgtcgtgg cgtgctttga tctcatggac
841 gtttctgaca tcgcgccatc tcatcatgca tcagtgcaag aggaacgtac tctcgggacc
901 agtaaatatt cgaatataac ggctaacgat catcctctgg tattcttctc acccagtgcg
961 cttcgttggg cgattgacca tgcttgcacc gattccttag tttctactcg aaatatccgt
1021 gtttgtgttg gtatcgatcc cctggtaact cgatggaccc gagacggggt acaagaggcc
1081 gctatcctca tggatgataa actaccatca gcaggccgtg cacgtatggc tttgcggaca
1141 ttgcttctcg ctagacgttc accaatgcca tctttcttac tgggggcctt aaagcagtcg
1201 ggcggtcagt tactggagca ctatcgatgt gacgcggcta acagatacgg atctcctacc
1261 gtacccatgt ctcatccacc accgtgttca aagtgtcctg aactgaaaga acaaattacc
1321 aaactctcgt cctcgcctac acccaaaatc gactctacca ctggccccgc tgcactgttg
1381 tcaaaaattt ctgacctcca gcgtgctaat agggaactgt cactgaaact ggtcgatatg
1441 caacctgctc gggaggacca cctgctgtct tatctcaatg aacacgtgtg cgtaaatgct
1501 agagatcatg agaagggtct gctctctcgc tgcaacgtat ctaatgaatc gatctcctct
1561 atccttgacc agcgtatgaa gaatcgggaa cggtttgaga ctcggctgcg gcatgaggcc
1621 agtgctgaat gggaacctcg tgtggaagcg ctaaaccaag agttggccaa agctcgtgtg
1681 gaacagcagg acatgatgac tcagtctcta cagtacttaa acgagcgtga cgaattactc
1741 cacgaagtgg acgagctcaa acgtgaactg accaccctgc gcgccgctaa tgtgcgcttg
1801 aacgctgaca atcatcggat gagccgtgca actcgtgttg gagacgcttt cgtcagcgac
1861 atcgagcctc tgccctctgg catacctggt gaatcgaaac catctatgga agaattggta
1921 gatgatctgt gagctttgac ttgtgactcg acttctctct gattccatgt acccacggcg
1981 gactcggtta ttcatc
//