LOCUS NC_015374 6327 bp RNA linear VRL 13-AUG-2018
DEFINITION Candiru virus segment L, complete genome.
ACCESSION NC_015374
VERSION NC_015374.1
DBLINK BioProject: PRJNA485481
KEYWORDS RefSeq.
SOURCE Chandiru virus
ORGANISM Chandiru virus
Viruses; Riboviria; Orthornavirae; Negarnaviricota;
Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae;
Phlebovirus; Phlebovirus candiruense.
REFERENCE 1 (bases 1 to 6327)
AUTHORS Palacios,G., Tesh,R., Travassos da Rosa,A., Savji,N., Sze,W.,
Jain,K., Serge,R., Guzman,H., Guevara,C., Nunes,M.R.,
Nunes-Neto,J.P., Kochel,T., Hutchison,S., Vasconcelos,P.F. and
Lipkin,W.I.
TITLE Characterization of the candiru antigenic complex (bunyaviridae:
phlebovirus), a highly diverse and reassorting group of viruses
affecting humans in tropical america
JOURNAL J. Virol. 85 (8), 3811-3820 (2011)
PUBMED 21289119
REFERENCE 2 (bases 1 to 6327)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (07-APR-2011) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 6327)
AUTHORS Palacios,G., Savji,N., Sze,W. and Lipkin,W.I.
TITLE Direct Submission
JOURNAL Submitted (14-APR-2010) Center for Infection and Immunity, 722 West
168th Street, New York City, NY 10032, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to HM119407.
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..6327
/organism="Chandiru virus"
/mol_type="genomic RNA"
/host="Homo sapiens"
/db_xref="taxon:629725"
/segment="L"
/country="Brazil"
/collection_date="1967"
gene 25..6291
/locus_tag="CDUVsL_gp1"
/db_xref="GeneID:10421735"
CDS 25..6291
/locus_tag="CDUVsL_gp1"
/codon_start=1
/product="L protein"
/protein_id="YP_004347993.1"
/db_xref="GeneID:10421735"
/translation="MEEILNKQQIPEGVGLFRPEIKQYDDSIMDVEIPFFHITKCDGY
MKIDLDLNNGVDYSTIGSSLISTIEVPDKSLPNLVHDVVFSHLASSTDVRFSSVFGVY
ADSYDHLSPDFILKTAAGSHHVVEFTTNRGGERGAFQACKDKFSKYHIPCENRAVGGR
VSLFVVSVYVRGVWSNLDLTDDEVNELVFRFRLAVAIMEEAKRYYPELTEDESEMTKQ
EREILGIVSSIQMDWKETSLKFPHFKEKVFEDFLTMSADEEYLSGIISEEITACQEDM
MESGFIGKVTGIDERLKLNESECNKMIDSYLKSRGPNCRDKLDSKSTVQIPPWVMTEY
LDGKSVSCLSGFEVEGDHPMCKIWRSVTIAAAMGDIDRADDDPETELKKALDGSIQKS
DERSRYHRIKLNLSNEEIIYGATLGVEGKSHKSNAQVEESRKRSKLGFSLDHDITNLE
EFINKHDLELFAESDDYFNPFQIDFDLRESAQKIHQPDLIMDQGENEFLANHKKLCMS
KLGSWCQMVSLIGAELSASVKQHVGKGQFVIKRVLNSPLFMLIKPTSSVSHIFVSFAL
VKSSHMGDLWDNGVFKHYIDAGDLFITDFISYKLSKLTNLCKCFPLMESAICFWTEIF
GFEPWNSTYIMSTDRSGSSKEAASMIKLTLLTLMEDKAVTEEIQTIQRYIIMEGFVSL
PELPKPHKMLSKLPAVLRSELQVYLVLRSLRTMERISRHPFRLQKKHSQISWSGLFNP
LTGNSLRELQPLISICYNGYFKNKEEETEPSALSRLYKKIIELEHLCPTDDIYLGSGD
PKEPKMHEFSRSFLKKCTDHGKTILRKIYGQNFMQQIDTQIMREISTITLEKLATLKA
SSNFDEKWYDYEKCNKEDYHREKAIVKMSEFAASGKTLAIEVFDECMKFVEKRGNMHI
CLFKKQQHGGDREIYVLGREERIIQSIVEAISRSIGRFFPSDTLCNPGNKIKIPETHG
IRARKHCKGAVWTCSTSDDARKWNQGHFVTKFALMLCEFTLPKWWPIIIRGCSMFTNK
YMMMNMRYISILSRHKELDIEDEFSRTIFKAFHGEVTVPWMDAGATFLKTKTGMMQGI
LHFTSSLLHTLHQEFIRSLSFKIFNTKVRPEMSQSVVIDMMQGSDDSSMMISFPCSNE
DQLMKCKIAAAICFRIKKRLGVFLAIYPSEKSTSNTDFVMEYNSEFFFHSQHVRPTVR
WIAACCNLPEVETLVARQEEASNLMTSVSEGGGSFSLAACIQQAQCTLHYMLMGMGVS
SLFEEYKKAIIRWKDPGLGFFLLDNPYCAGLGGFRFNLYKAIAQTPLKCLYSYFMKKV
RHGLETNDGTIPESCSVSPGGAIVLSSALRWGSKQKFYKLRDKLNIPEDWIDQINQNP
SILYRAPRSGEEVILRIAEKVHSPGVVSSLSTGNAVAKVIASSVYFLSAAIFQDSGRQ
EFSILDDSKYSLLQKLSKLEGINLTNAISDEDLLFLFPNIEDLQSLDSLVYNRGAIEI
VKRKQIKENTQSRVIVFEGNRNLRTPAEYLISDKWFGTQKSKIGRTAFDQEWVKVTSI
IPWLRESPQETLQSSPLDNHIQIRNFFSRMDQKPRVVRVTGAPIKKRSGVSKLSMVIR
DNFSKLGFIRDIEDITGTSRTNSAELLKHFMFCALQGPYSQERKLQMVIDLLNKSNPI
GIKDSDGKSRSNILAILQSYVYREPHIARQIEDAGAGIIGGFVVPQKPKKIENTIYYY
GYGVWRGVMDGKQVQIELDNAVGSPPVIISVTMEESAEPWQICKSIRSWAEDVGAKNN
LDISPKIKKRTCKYWMFDFKTFSSDKAYGAPVYMTKKKMVDFRLIDDAEISIKVRKST
VNLYVRSDGRDVHILSYSASDSDLSPASLRINDESKDEMMELFNKEPSKSWASCSPIP
AIMMHKIIKVVQGELKISSLDSGRLGEIMKLCCESSLRSRIGTLFSALPSVQNTSRVD
VDDLIDIVLTDSKTAGFREIVQSLENDIKDEYEVEDFDLSDIDLFGPAHYKELSDLNT
ISHPLMDDYVEFCISTVGRKELRRILETNRCKTKDLQLSKDLFLVLGRNPDDIKVDEY
NLREQMAVEDDMIG"
misc_feature 181..450
/locus_tag="CDUVsL_gp1"
/note="L protein N-terminus; Region: L_protein_N;
pfam15518"
/db_xref="CDD:373916"
misc_feature 580..1281
/locus_tag="CDUVsL_gp1"
/note="Protein of unknown function (DUF3770); Region:
DUF3770; pfam12603"
/db_xref="CDD:289377"
misc_feature 1834..3921
/locus_tag="CDUVsL_gp1"
/note="Bunyavirus RNA dependent RNA polymerase; Region:
Bunya_RdRp; pfam04196"
/db_xref="CDD:282102"
ORIGIN
1 gaaacacaca aagaagccca aactatggaa gaaatactaa acaaacaaca aatccccgag
61 ggggtaggat tgtttagacc agagataaag caatacgatg attctatcat ggatgttgag
121 ataccattct tccacataac taagtgtgat ggatacatga aaatagattt ggatctaaat
181 aacggtgttg attattccac tattgggtca tcattgatat ccaccattga agttccagat
241 aagtctcttc ccaatcttgt ccatgatgtg gtcttctcac atcttgccag cagcactgat
301 gtgaggttct catcagtgtt tggagtgtat gctgattctt atgatcatct gtcccctgac
361 ttcattctaa aaacagctgc cggatctcat catgttgttg aatttacgac taacaggggt
421 ggagagagag gggcttttca ggcatgcaaa gacaagtttt ctaaatatca cattccttgt
481 gagaatagag ctgttggagg cagggtatct ctttttgtag tttctgttta tgttaggggt
541 gtgtggtcaa atcttgattt aacagatgat gaagtcaatg aacttgtgtt tagatttaga
601 ctggcagtgg ccataatgga ggaggcaaaa agatactatc ctgaattaac agaagatgaa
661 agtgagatga ccaagcaaga gagagaaatt cttggtattg tgtcttcaat acaaatggac
721 tggaaagaga ctagcctgaa gtttccacac ttcaaagaaa aagtatttga ggatttcttg
781 acaatgtctg cagatgagga atatctctct ggcataatat ctgaggagat taccgcatgt
841 caagaggata tgatggaatc aggattcatt gggaaagtga caggcattga tgagaggctc
901 aaactgaatg aatcagagtg taataaaatg attgacagtt acttgaagag tagaggaccc
961 aactgcagag acaaattgga tagtaaatcc acagtccaga ttccgccatg ggtgatgact
1021 gagtatttag atgggaaatc tgtgtcttgt ttgtcaggat tcgaagtaga gggagatcac
1081 ccgatgtgca aaatatggag atccgtcaca atcgcagctg ctatgggtga catagatcgt
1141 gctgatgatg atcctgagac tgagctcaaa aaggccttag atggcagcat acaaaagagt
1201 gatgagagaa gtagatatca tcgtataaaa ctaaatttat ctaatgaaga gataatttat
1261 ggtgcaactt tgggtgttga agggaaatct cataaaagca atgcccaagt tgaagagtcg
1321 agaaagagaa gcaaacttgg attttctcta gaccacgaca ttacaaactt ggaagaattt
1381 attaataaac atgatcttga gttatttgca gaatccgatg attattttaa ccctttccag
1441 attgactttg acctgagaga gtcagctcag aagatacatc agccagactt gatcatggac
1501 caaggtgaaa atgagttcct agcaaaccac aagaaattgt gcatgtctaa gctaggctct
1561 tggtgtcaaa tggtttcact gattggtgcg gaattatcag catcagttaa acagcatgtg
1621 gggaaaggac aatttgtgat caaaagagta ttgaattctc ctcttttcat gctaatcaaa
1681 cccacatctt ctgttagtca tatttttgtt tcttttgcac tcgtgaaatc tagtcacatg
1741 ggagatctgt gggataatgg tgtcttcaag cattacatcg atgcaggaga cttgttcatc
1801 actgatttta tttcttacaa gcttagcaaa ctgaccaatc tttgtaagtg tttccctctt
1861 atggagagtg caatctgttt ctggactgaa atatttggtt ttgagccttg gaattccaca
1921 tacataatgt ctacagacag gagtgggagt tcaaaagaag cagcttcaat gatcaaactg
1981 actctgctaa cacttatgga agataaagca gtcactgaag agattcagac cattcaaaga
2041 tacataatta tggaagggtt cgtttctttg ccagaactgc caaaaccaca caaaatgttg
2101 tcaaaactac cagctgtgct aaggtcagag ttgcaagtgt atctagtctt aaggtctctg
2161 agaacaatgg aaagaatatc tagacatcct tttaggctgc agaaaaaaca tagccaaatc
2221 tcctggtcag ggctgttcaa tcctttaact ggaaactccc tcagggagct ccaaccacta
2281 attagcatat gttataatgg atatttcaaa aacaaggagg aagaaactga accctctgca
2341 ttatcaagat tatacaagaa aattattgaa ctagagcatc tatgcccaac tgatgacatc
2401 tatttaggat caggcgaccc aaaagagcca aagatgcatg agtttagcag gtcatttcta
2461 aaaaaatgta ctgatcatgg gaaaaccata ttaagaaaaa tctatggtca gaattttatg
2521 cagcagatag acactcagat tatgagggag attagtacca tcactcttga aaaacttgca
2581 acattgaaag ctagtagtaa ttttgatgag aagtggtatg actatgagaa gtgcaacaaa
2641 gaagactatc atcgtgagaa ggctattgtt aagatgtctg aatttgctgc atctgggaag
2701 acattagcta tagaagtctt tgatgaatgt atgaaatttg tggagaaaag aggcaacatg
2761 cacatctgtc tttttaagaa gcaacagcat ggtggagata gggagattta tgtcttgggt
2821 agagaagaaa gaataattca atctatagtt gaggcaatat ctaggtcaat tggtagattc
2881 tttccctcag atactctgtg caatcctggc aacaagatta aaatacctga aacacacgga
2941 ataagagcta gaaaacactg taaaggtgct gtgtggactt gttccacatc tgatgacgct
3001 aggaaatgga atcaaggtca ctttgttaca aaatttgctt taatgctgtg cgagttcacc
3061 cttcctaaat ggtggccaat catcattagg ggatgctcga tgttcaccaa caaatacatg
3121 atgatgaaca tgaggtatat cagcatttta agcaggcaca aggaattgga tattgaagat
3181 gagttttcta gaactatatt caaagctttt catggtgagg tgacagtgcc atggatggat
3241 gcaggggcca cctttctgaa aacaaaaaca gggatgatgc aagggatatt acatttcacc
3301 tcttctctct tacacacact tcaccaagaa ttcattaggt cattatcttt taaaatcttc
3361 aacaccaaag tgaggccaga aatgtcgcaa tcagtagtga ttgacatgat gcagggctct
3421 gatgatagca gcatgatgat cagcttccca tgttctaatg aagatcaact aatgaagtgt
3481 aagatagctg ctgctatttg cttcaggata aagaaaagat taggagtctt cttagccatt
3541 tatccttcag aaaaatccac ttctaatact gactttgtga tggaatataa ttcagagttc
3601 ttcttccact ctcagcatgt ccgtccaaca gttaggtgga tagctgcatg ctgtaacctt
3661 cctgaagtag agactttagt tgcaaggcaa gaagaggctt ctaacttgat gacttctgtg
3721 tcagaaggag ggggctcatt ttccttagca gcttgtatcc agcaggctca atgtaccctg
3781 cattacatgt tgatggggat gggggtcagt tctttatttg aagaatacaa aaaagcaatc
3841 atacggtgga aggatcctgg cctaggtttc ttcttgctag ataatcctta ctgtgcagga
3901 ttaggaggat tcaggttcaa cctgtataaa gccattgccc agacaccact aaaatgtctt
3961 tattcatact ttatgaagaa ggtcagacac ggtttagaga ccaatgatgg gacaatacca
4021 gagagctgct cagtcagtcc aggtggtgct attgtgttga gttcagcact taggtggggc
4081 tcaaaacaaa agttttacaa acttagagat aagttgaata tccctgaaga ctggattgat
4141 caaattaatc aaaatccatc tatattatac agagctccca gatctggtga agaagtcatt
4201 cttaggattg ctgaaaaagt gcattcacct ggagttgttt catccttatc aacaggcaat
4261 gcagtggcca aggtcattgc ctcatctgtg tatttcctaa gtgcagccat attccaggac
4321 tctggcagac aagaattctc cattttagat gactcaaagt acagcttatt gcaaaagctg
4381 agtaagctag aaggaattaa tctaaccaat gcaatcagtg atgaagatct attgttctta
4441 tttccaaaca ttgaagatct gcaatctctt gatagtttgg tgtataatcg aggagctatt
4501 gagattgtaa aaagaaaaca gataaaagaa aacacacagt ctagagttat cgtctttgag
4561 ggaaacagaa atctcagaac ccctgctgag tatttaataa gtgataaatg gtttgggact
4621 cagaaaagca aaattgggag aacagcattt gaccaagagt gggtcaaggt tacatcaatc
4681 atcccctggc taagagaaag cccacaagaa actcttcaga gctctccact ggacaatcac
4741 atccaaataa gaaatttctt ctctaggatg gatcaaaagc cgagggtagt tagagtaaca
4801 ggtgcaccaa taaagaaaag gtcaggagtc agcaagttgt cgatggtcat aagagataac
4861 ttctcaaaat taggatttat tagagacata gaagatataa ctggaacaag tagaacaaat
4921 tctgcagagt tgctcaaaca cttcatgttt tgtgctctac agggtccata ttcccaggag
4981 agaaaacttc agatggtgat agacctctta aataaatcaa atcctatagg catcaaagac
5041 agtgatggaa aatcacgatc aaacatttta gctattttac agagttatgt gtatagagaa
5101 ccacatattg cacgacaaat tgaagatgct ggtgctggaa ttatcggagg gtttgtggtt
5161 cctcaaaaac caaaaaagat tgaaaacaca atatattatt atggttatgg tgtatggaga
5221 ggagtgatgg atggaaaaca agtgcaaatc gaacttgaca atgcagtggg cagccctcct
5281 gttataatat ctgtcactat ggaagagtct gctgaaccct ggcaaatatg caagagtata
5341 aggtcatggg ctgaggatgt gggtgcaaaa aacaatttgg atatttcccc aaagataaaa
5401 aagaggactt gcaaatactg gatgtttgac tttaaaacat tctcttcaga caaagcatat
5461 ggtgctcctg tttacatgac gaagaagaag atggttgatt ttagactaat tgatgatgca
5521 gaaataagta taaaagttag gaaatccacc gtgaatttgt atgtcagaag tgatggcaga
5581 gatgtccaca tactctctta ctcagcatca gactcagatc tcagccctgc aagcttgagg
5641 attaatgatg agtccaagga tgaaatgatg gaattattca ataaagagcc tagcaagtct
5701 tgggcgtcat gctcaccaat cccggctatc atgatgcaca agatcatcaa agttgtccaa
5761 ggggaactta aaatatcatc gttagacagt ggtagactgg gagagatcat gaaattgtgc
5821 tgtgaatcat ctttgcgatc cagaattggg actttatttt ctgctcttcc aagtgtgcaa
5881 aacacctcta gggttgatgt cgatgacctg atagatattg ttttgactga ctcaaagaca
5941 gctggcttca gagaaattgt gcagtcacta gaaaatgaca taaaagatga gtacgaggtg
6001 gaagactttg acttatctga tatagactta ttcggaccag cacattataa agaattgtca
6061 gacctgaaca ccataagtca tcccttaatg gatgactatg tagagttctg tatatcaaca
6121 gttggtcgaa aggagctgag acggatattg gagaccaata gatgtaaaac taaagactta
6181 caattgtcta aggatctctt tttggtatta ggcaggaatc cagatgatat taaagtggat
6241 gaatataact taagagagca aatggcagtg gaagacgaca tgataggata agatcctaca
6301 acatgtcatt aagtgcgaac acaaagt
//
