LOCUS NC_021584 1012 bp RNA linear VRL 13-AUG-2018
DEFINITION Rotavirus G chicken/03V0567/DEU/2003 segment 8, complete sequence.
ACCESSION NC_021584
VERSION NC_021584.1
DBLINK BioProject: PRJNA485481
KEYWORDS RefSeq.
SOURCE Rotavirus G chicken/03V0567/DEU/2003
ORGANISM Rotavirus G chicken/03V0567/DEU/2003
Viruses; Riboviria; Orthornavirae; Duplornaviricota;
Resentoviricetes; Reovirales; Sedoreoviridae; Rotavirus; Rotavirus
G.
REFERENCE 1 (bases 1 to 1012)
AUTHORS Kindler,E., Trojnar,E., Heckel,G., Otto,P.H. and Johne,R.
TITLE Analysis of rotavirus species diversity and evolution including the
newly determined full-length genome sequences of rotavirus F and G
JOURNAL Infect. Genet. Evol. 14, 58-67 (2013)
PUBMED 23237956
REFERENCE 2 (bases 1 to 1012)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2013) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1012)
AUTHORS Johne,R., Trojnar,E., Kindler,E. and Otto,P.
TITLE Direct Submission
JOURNAL Submitted (11-APR-2012) Food Hygiene and Safety Concepts, Federal
Institute for Risk Assessment, Diedersdorfer Weg 1, Berlin 12277,
Germany
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to JQ920009.
##Assembly-Data-START##
Assembly Method :: SeqBuilder v. 7.2.1
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..1012
/organism="Rotavirus G chicken/03V0567/DEU/2003"
/mol_type="genomic RNA"
/strain="chicken/03V0567/DEU/2003"
/host="chicken"
/db_xref="taxon:994995"
/country="Germany"
/collection_date="2003"
gene 59..961
/locus_tag="RVG_s8_gp1"
/db_xref="GeneID:16414232"
CDS 59..961
/locus_tag="RVG_s8_gp1"
/codon_start=1
/product="NSP2"
/protein_id="YP_008136236.1"
/db_xref="GeneID:16414232"
/translation="MTQSVSLADFIVKTDDGYMPSDRECKVLDRFLSREQKAIREEYK
SRTGVKCDLRKKMFMLAAPSRRFTQEGVVPMKELRSKTDIPSAVKRLITDWLLKTLED
DDVCEVFEDVFENKFPDIFASSDKISRFAMRLENENDLIHKNVSKAMNAFAACFHDIK
PSFATEGKCTVARACEDSIILEFPVIPEHLRIGQVRGVFYKLYPLSDDLPTQGFLALK
HVSNNQFQMYHGHGHVRTVPFSEVPEAVRSFAKKQKDELEKIAKDQLAVQCGQKFIKM
IDDLRAGRKIEEVISDVMKFDKKQ"
ORIGIN
1 ggaattttag tgtctcagtg agtgcgtcgt gagaagggag ccataaccct tggtcaccat
61 gacgcagtcg gtttcattag ctgatttcat tgtcaaaact gatgatggtt atatgccaag
121 tgacagagaa tgtaaagtgc ttgatagatt tctgtccaga gaacaaaaag caattcgtga
181 agaatataaa tccagaacgg gagtgaaatg tgatttaaga aagaaaatgt ttatgctagc
241 tgcaccatca aggagattta ctcaggaagg tgtagttcct atgaaggaat tgagaagtaa
301 gactgacatt ccaagtgcag tgaaaagatt gatcactgat tggctgctga aaacactaga
361 agacgacgat gtctgtgaag tttttgaaga tgtatttgaa aataagtttc cagatatttt
421 cgcatcatcg gataaaattt caagatttgc aatgcgacta gaaaatgaaa acgatttgat
481 tcataaaaat gtatcaaagg caatgaatgc gtttgcagct tgttttcacg atattaagcc
541 ttcatttgcc acagagggaa aatgtactgt tgcaagagca tgtgaagatt cgatcattct
601 ggaatttcct gtaataccag aacatctgag aattggacaa gttagaggag tattctataa
661 attgtatcca ctatctgatg atctaccaac gcaaggtttt cttgctttaa aacatgtgtc
721 aaacaatcaa ttccaaatgt accatggaca cggacatgtt agaacagtac cgttttctga
781 agtgccagaa gcagtacgat cattcgcaaa aaaacagaaa gatgaactgg aaaagatagc
841 taaagatcaa cttgccgtgc agtgcggaca gaaattcatt aaaatgattg atgatctacg
901 tgctggtagg aagattgaag aagtgatttc tgacgtgatg aaattcgaca agaaacagtg
961 aaaaaactga ctgtgacaaa tccattcatt gagcgctggg taataaagac cc
//