GenomeNet

Database: RefSeq
Entry: NC_021584
LinkDB: NC_021584
Original site: NC_021584 
LOCUS       NC_021584               1012 bp    RNA     linear   VRL 13-AUG-2018
DEFINITION  Rotavirus G chicken/03V0567/DEU/2003 segment 8, complete sequence.
ACCESSION   NC_021584
VERSION     NC_021584.1
DBLINK      BioProject: PRJNA485481
KEYWORDS    RefSeq.
SOURCE      Rotavirus G chicken/03V0567/DEU/2003
  ORGANISM  Rotavirus G chicken/03V0567/DEU/2003
            Viruses; Riboviria; Orthornavirae; Duplornaviricota;
            Resentoviricetes; Reovirales; Sedoreoviridae; Rotavirus; Rotavirus
            G.
REFERENCE   1  (bases 1 to 1012)
  AUTHORS   Kindler,E., Trojnar,E., Heckel,G., Otto,P.H. and Johne,R.
  TITLE     Analysis of rotavirus species diversity and evolution including the
            newly determined full-length genome sequences of rotavirus F and G
  JOURNAL   Infect. Genet. Evol. 14, 58-67 (2013)
   PUBMED   23237956
REFERENCE   2  (bases 1 to 1012)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JUN-2013) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1012)
  AUTHORS   Johne,R., Trojnar,E., Kindler,E. and Otto,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2012) Food Hygiene and Safety Concepts, Federal
            Institute for Risk Assessment, Diedersdorfer Weg 1, Berlin 12277,
            Germany
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to JQ920009.
            
            ##Assembly-Data-START##
            Assembly Method       :: SeqBuilder v. 7.2.1
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Rotavirus G chicken/03V0567/DEU/2003"
                     /mol_type="genomic RNA"
                     /strain="chicken/03V0567/DEU/2003"
                     /host="chicken"
                     /db_xref="taxon:994995"
                     /country="Germany"
                     /collection_date="2003"
     gene            59..961
                     /locus_tag="RVG_s8_gp1"
                     /db_xref="GeneID:16414232"
     CDS             59..961
                     /locus_tag="RVG_s8_gp1"
                     /codon_start=1
                     /product="NSP2"
                     /protein_id="YP_008136236.1"
                     /db_xref="GeneID:16414232"
                     /translation="MTQSVSLADFIVKTDDGYMPSDRECKVLDRFLSREQKAIREEYK
                     SRTGVKCDLRKKMFMLAAPSRRFTQEGVVPMKELRSKTDIPSAVKRLITDWLLKTLED
                     DDVCEVFEDVFENKFPDIFASSDKISRFAMRLENENDLIHKNVSKAMNAFAACFHDIK
                     PSFATEGKCTVARACEDSIILEFPVIPEHLRIGQVRGVFYKLYPLSDDLPTQGFLALK
                     HVSNNQFQMYHGHGHVRTVPFSEVPEAVRSFAKKQKDELEKIAKDQLAVQCGQKFIKM
                     IDDLRAGRKIEEVISDVMKFDKKQ"
ORIGIN      
        1 ggaattttag tgtctcagtg agtgcgtcgt gagaagggag ccataaccct tggtcaccat
       61 gacgcagtcg gtttcattag ctgatttcat tgtcaaaact gatgatggtt atatgccaag
      121 tgacagagaa tgtaaagtgc ttgatagatt tctgtccaga gaacaaaaag caattcgtga
      181 agaatataaa tccagaacgg gagtgaaatg tgatttaaga aagaaaatgt ttatgctagc
      241 tgcaccatca aggagattta ctcaggaagg tgtagttcct atgaaggaat tgagaagtaa
      301 gactgacatt ccaagtgcag tgaaaagatt gatcactgat tggctgctga aaacactaga
      361 agacgacgat gtctgtgaag tttttgaaga tgtatttgaa aataagtttc cagatatttt
      421 cgcatcatcg gataaaattt caagatttgc aatgcgacta gaaaatgaaa acgatttgat
      481 tcataaaaat gtatcaaagg caatgaatgc gtttgcagct tgttttcacg atattaagcc
      541 ttcatttgcc acagagggaa aatgtactgt tgcaagagca tgtgaagatt cgatcattct
      601 ggaatttcct gtaataccag aacatctgag aattggacaa gttagaggag tattctataa
      661 attgtatcca ctatctgatg atctaccaac gcaaggtttt cttgctttaa aacatgtgtc
      721 aaacaatcaa ttccaaatgt accatggaca cggacatgtt agaacagtac cgttttctga
      781 agtgccagaa gcagtacgat cattcgcaaa aaaacagaaa gatgaactgg aaaagatagc
      841 taaagatcaa cttgccgtgc agtgcggaca gaaattcatt aaaatgattg atgatctacg
      901 tgctggtagg aagattgaag aagtgatttc tgacgtgatg aaattcgaca agaaacagtg
      961 aaaaaactga ctgtgacaaa tccattcatt gagcgctggg taataaagac cc
//
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