LOCUS NC_021587 678 bp RNA linear VRL 13-AUG-2018
DEFINITION Rotavirus G chicken/03V0567/DEU/2003 segment 11, complete sequence.
ACCESSION NC_021587
VERSION NC_021587.1
DBLINK BioProject: PRJNA485481
KEYWORDS RefSeq.
SOURCE Rotavirus G chicken/03V0567/DEU/2003
ORGANISM Rotavirus G chicken/03V0567/DEU/2003
Viruses; Riboviria; Orthornavirae; Duplornaviricota;
Resentoviricetes; Reovirales; Sedoreoviridae; Rotavirus; Rotavirus
G.
REFERENCE 1 (bases 1 to 678)
AUTHORS Kindler,E., Trojnar,E., Heckel,G., Otto,P.H. and Johne,R.
TITLE Analysis of rotavirus species diversity and evolution including the
newly determined full-length genome sequences of rotavirus F and G
JOURNAL Infect. Genet. Evol. 14, 58-67 (2013)
PUBMED 23237956
REFERENCE 2 (bases 1 to 678)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2013) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 678)
AUTHORS Johne,R., Trojnar,E., Kindler,E. and Otto,P.
TITLE Direct Submission
JOURNAL Submitted (11-APR-2012) Food Hygiene and Safety Concepts, Federal
Institute for Risk Assessment, Diedersdorfer Weg 1, Berlin 12277,
Germany
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to JQ920012.
##Assembly-Data-START##
Assembly Method :: SeqBuilder v. 7.2.1
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..678
/organism="Rotavirus G chicken/03V0567/DEU/2003"
/mol_type="genomic RNA"
/strain="chicken/03V0567/DEU/2003"
/host="chicken"
/db_xref="taxon:994995"
/country="Germany"
/collection_date="2003"
gene 60..605
/locus_tag="RVG_s11_gp1"
/db_xref="GeneID:16414235"
CDS 60..605
/locus_tag="RVG_s11_gp1"
/codon_start=1
/product="NSP5"
/protein_id="YP_008136239.1"
/db_xref="GeneID:16414235"
/translation="MAEVSEFDFKIKKDKKKQEKTKSKKMVVKDNETVVTHEEKSERG
SVYSEESSSHSSSNYAEAYERLQRELNASESNDNKCKRTIRNWADEVEKQESESENEY
DVPDTEFIPKKTNIIDMGSEAKEQIMNEISKIRMEMDVIKEAMKPQGVDAAFNLILKN
VDNLSTKQKHALVNAIVMSMK"
ORIGIN
1 ggaatattaa agtgtcgctt ggtggctgga aacactgagt ggcagcctct tgccctagca
61 tggctgaagt ctctgaattt gatttcaaaa taaagaaaga taagaagaaa caagaaaaaa
121 cgaaatcgaa gaaaatggtt gtcaaagata atgaaacagt agtaacacat gaagaaaagt
181 ctgaacgtgg ttcagtctat tctgaagaat catcaagtca ttcatcaagt aattacgctg
241 aagcatatga aaggctacag cgtgaactta atgctagcga atcaaatgac aacaagtgta
301 agcgaacaat tagaaactgg gcagatgaag ttgaaaaaca agaaagtgaa tctgagaacg
361 aatatgatgt accagataca gaattcattc caaagaaaac aaacataata gatatggggt
421 ctgaagcaaa agagcagata atgaatgaaa tatcaaaaat tagaatggaa atggatgtaa
481 ttaaagaagc aatgaaacca caaggcgttg atgctgcatt taacctcatt ctcaagaatg
541 tagacaacct atctacaaaa caaaaacacg ctcttgtaaa cgcaatagtt atgtcaatga
601 aataatcaaa taacagagtg cggtgaaaat cgcctgacat gactaggggt tagcccctga
661 ggtgactaat aaagaccc
//