LOCUS NC_021589 2352 bp RNA linear VRL 13-AUG-2018
DEFINITION Rotavirus G chicken/03V0567/DEU/2003 segment 4, complete sequence.
ACCESSION NC_021589
VERSION NC_021589.1
DBLINK BioProject: PRJNA485481
KEYWORDS RefSeq.
SOURCE Rotavirus G chicken/03V0567/DEU/2003
ORGANISM Rotavirus G chicken/03V0567/DEU/2003
Viruses; Riboviria; Orthornavirae; Duplornaviricota;
Resentoviricetes; Reovirales; Sedoreoviridae; Rotavirus; Rotavirus
G.
REFERENCE 1 (bases 1 to 2352)
AUTHORS Kindler,E., Trojnar,E., Heckel,G., Otto,P.H. and Johne,R.
TITLE Analysis of rotavirus species diversity and evolution including the
newly determined full-length genome sequences of rotavirus F and G
JOURNAL Infect. Genet. Evol. 14, 58-67 (2013)
PUBMED 23237956
REFERENCE 2 (bases 1 to 2352)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2013) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2352)
AUTHORS Johne,R., Trojnar,E., Kindler,E. and Otto,P.
TITLE Direct Submission
JOURNAL Submitted (11-APR-2012) Food Hygiene and Safety Concepts, Federal
Institute for Risk Assessment, Diedersdorfer Weg 1, Berlin 12277,
Germany
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to JQ920005.
##Assembly-Data-START##
Assembly Method :: SeqBuilder v. 7.2.1
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..2352
/organism="Rotavirus G chicken/03V0567/DEU/2003"
/mol_type="genomic RNA"
/strain="chicken/03V0567/DEU/2003"
/host="chicken"
/db_xref="taxon:994995"
/country="Germany"
/collection_date="2003"
gene 9..2315
/locus_tag="RVG_s4_gp1"
/db_xref="GeneID:16414237"
CDS 9..2315
/locus_tag="RVG_s4_gp1"
/codon_start=1
/product="VP3"
/protein_id="YP_008136241.1"
/db_xref="GeneID:16414237"
/translation="MAKLIEFSELGARVQNTEDVFRISNSTEKFIIINPSRNAENYIK
ERTHYVTIDKRNVDQSIKEYEELFPTSVSTNNSEIVKLGACGHIVTNCLHVDHPYFTS
NITSLGDYAPTGWRYEAMGKRDDQLGDFIFNHIFDQCNGWQNGEYINRFNYGVIPNKK
TSQKEVDSYFSELMKEIVKVQDDVDADSYYYNIQRRQIGTAVRETVFELIEKKNWNVN
LIGPEFESFALIYKLLMSNYTGDFKMFTINETQEHNYKKELTVWKKKTLSLRTVLANK
WKYENAFCKLLMSHLCKRRKYSYIYINNRYNVDNWVINYPYIMNVILTDDLITHAENS
IIFGFEVTDNTSSYAVNKISDKVVYTSTPYADENNAWTMLIKGERIGDKFNKDDSWYA
KKNNYSNFVYGGDIFTTKDLNLNYVNIALYSLSNSKNSIELIKSVLSYEHIVTFPLPV
RMDWRQMEDYEEKPFLGLVRQNKFEDHVIHPKILALEHDCEIVTEMVFLQLGSRRCII
SDMYQHAVVMRIKTDSFYSDKYFSHIGIRQVSVYNRDNFLTSRLNAYVDRQLSRSIDF
TQIIKNKFGGFSGHLVAVERYFNQLIYTMSPIRWAKRAFSEAKYKKRDQYKNADGEKH
EMTDFINTYHYLNLYYTTFEDLIECSGIADYPQYYIAVKSGMSHITLQLTEVDPTILL
DDIVFKIKGVRLKRVGETKFKDLNVVLYQTKEVLQYHIVKILRQNKIACQQSRPYIMH
MNVKEDGDDKDEIVINERNVYVKKIVRT"
ORIGIN
1 ggcatttaat ggctaagtta attgaatttt ccgaactcgg ggcgagggtt caaaatacag
61 aagacgtatt cagaatttca aatagtactg aaaaatttat aattatcaat ccatctagaa
121 acgctgaaaa ttatataaaa gagagaactc attatgttac aattgataag agaaatgttg
181 accaatcaat taaagaatac gaagagttat tccctacatc agtttcaacg aataattcag
241 aaatcgttaa gcttggtgct tgtggacaca tcgttactaa ttgcttacac gttgatcacc
301 cttattttac aagtaatatt actagtctgg gagattatgc acccactggt tggaggtacg
361 aagcaatggg taaaagagat gatcaattgg gcgatttcat ttttaatcat atatttgatc
421 agtgcaatgg ctggcaaaat ggcgagtaca ttaatagatt taattatggt gtaataccaa
481 ataaaaaaac ttcacaaaag gaagtagaca gctatttttc tgaactaatg aaagagattg
541 ttaaagtaca agatgatgta gatgcagata gctattatta taatatacag cggagacaaa
601 ttggaacagc ggttagagaa accgtttttg aattgataga aaagaaaaat tggaatgtaa
661 atttaatagg tccagaattt gaatcatttg ctttaattta taaattacta atgtcaaatt
721 acacaggaga ttttaaaatg tttacaatta atgaaacgca agaacataac tataaaaaag
781 aattgactgt atggaagaaa aaaaccttat cgttgagaac agttttagct aacaagtgga
841 aatacgagaa tgcgttctgt aaattattaa tgtcacatct atgtaaaagg aggaaatata
901 gctacatcta tataaataat agatataatg ttgataactg ggttataaat tatccatata
961 taatgaatgt gatattaaca gatgatttaa ttacacacgc tgagaattca ataatttttg
1021 gttttgaagt gacagataat acctcatctt acgcagtaaa taaaatatca gataaagttg
1081 tatatacatc aacgccatat gcggacgaaa ataatgcttg gactatgtta ataaaaggtg
1141 aaagaatagg agataaattt aacaaagatg attcatggta tgctaagaaa aataactact
1201 caaattttgt atacggggga gatatattta caactaaaga cttaaattta aattacgtaa
1261 atattgcatt atattctcta tcaaattcga aaaattcaat tgagttaatc aaatcagtat
1321 tatcatatga acatattgtg acatttccac tgccagttag aatggactgg cggcaaatgg
1381 aagactatga agaaaagccg tttttgggac tggtgagaca aaataagttc gaagatcatg
1441 tgatacatcc gaagatacta gctcttgagc atgattgtga aattgttact gagatggtat
1501 ttttgcagtt aggaagtaga agatgtatta tatcagatat gtatcaacat gctgttgtaa
1561 tgagaataaa aacagacagt ttctattcag ataaatattt ttctcacata ggaattagac
1621 aagtatcagt atataatcgt gataattttt taacctcaag attaaatgct tatgtagata
1681 gacaattgtc gaggtcaata gattttacac aaataataaa aaataaattt ggaggatttt
1741 ctggtcactt agtggcagtt gaaagatatt ttaatcagtt aatatacaca atgtcaccaa
1801 taagatgggc gaaaagagca ttttctgaag ctaaatataa aaaaagagat caatacaaaa
1861 atgctgatgg tgaaaaacat gaaatgactg attttataaa tacatatcat tatttaaatc
1921 tatactacac aacattcgaa gatttaattg aatgctctgg catagccgat tatccacaat
1981 actatatagc ggttaaatca ggtatgagtc atataacact acaattgaca gaagtagatc
2041 caactatctt actagacgac attgttttta aaataaaagg tgtcagacta aaacgggttg
2101 gagaaactaa gtttaaagat ttaaatgttg tgctgtatca aactaaagaa gtattacagt
2161 accatattgt taaaattttg cgacaaaaca aaattgcgtg tcaacaatca agaccatata
2221 taatgcatat gaatgtaaaa gaggatggag atgacaaaga tgaaatagtg ataaatgaga
2281 gaaatgttta tgtaaagaaa atcgtccgga cttagccatt cggggaggat ctcctggaga
2341 taataaagac cc
//
