LOCUS       NC_021627                990 bp    RNA     linear   VRL 13-AUG-2018
DEFINITION  Rotavirus F chicken/03V0568/DEU/2003 segment 9, complete sequence.
ACCESSION   NC_021627
VERSION     NC_021627.1
DBLINK      Project: 210412
            BioProject: PRJNA485481
KEYWORDS    RefSeq.
SOURCE      Rotavirus F chicken/03V0568/DEU/2003
  ORGANISM  Rotavirus F chicken/03V0568/DEU/2003
            Viruses; Riboviria; Orthornavirae; Duplornaviricota;
            Resentoviricetes; Reovirales; Sedoreoviridae; Rotavirus; Rotavirus
            F.
REFERENCE   1  (bases 1 to 990)
  AUTHORS   Kindler,E., Trojnar,E., Heckel,G., Otto,P.H. and Johne,R.
  TITLE     Analysis of rotavirus species diversity and evolution including the
            newly determined full-length genome sequences of rotavirus F and G
  JOURNAL   Infect. Genet. Evol. 14, 58-67 (2013)
   PUBMED   23237956
REFERENCE   2  (bases 1 to 990)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUL-2013) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 990)
  AUTHORS   Johne,R., Trojnar,E., Kindler,E. and Otto,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2012) Food Hygiene and Safety Concepts, Federal
            Institute for Risk Assessment, Diedersdorfer Weg 1, Berlin 12277,
            Germany
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to JQ919998.
            
            ##Assembly-Data-START##
            Assembly Method       :: SeqBuilder v. 7.2.1
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Rotavirus F chicken/03V0568/DEU/2003"
                     /mol_type="genomic RNA"
                     /strain="chicken/03V0568/DEU/2003"
                     /host="chicken"
                     /db_xref="taxon:994994"
                     /segment="9"
                     /country="Germany"
                     /collection_date="2003"
     gene            70..957
                     /locus_tag="M908_s9gp1"
                     /db_xref="GeneID:16028492"
     CDS             70..957
                     /locus_tag="M908_s9gp1"
                     /codon_start=1
                     /product="VP7"
                     /protein_id="YP_008145315.1"
                     /db_xref="GeneID:16028492"
                     /translation="MFAMLNDLVILIRNIVILIAILRFFGYAEITENVDVELSDTAIA
                     DRRGTVCLYVPNKAATELAKNNAKPTWQEILNQLFITQGIPIGDVKYILYTEVNELFQ
                     SKSRCNYNLYVVHGPDDLSYTAQLLLNKWECTDYNFNVYYYEQQERHYLKFKSSGTNC
                     VAVACPIDSTTLGIGCVSTDVKTYESVTQHDAFIDLIDQQKYRMNITGTQAINCYYQD
                     CKLVGPDYSSYLIVASTESYFRNVDGDLDPLTQAGARMSRINFKQWWQVFYQIVQMIN
                     NIINQMTKTGTYYAYNLYR"
     misc_feature    70..921
                     /locus_tag="M908_s9gp1"
                     /note="Glycoprotein VP7; Region: VP7; pfam00434"
                     /db_xref="CDD:425679"
ORIGIN      
        1 ggcttatttt tgtttacgaa cagcctccat cagctcgtgt aaacataagt aagtagcctg
       61 taattcagga tgttcgcaat gcttaatgat ttagttatat tgattagaaa tatagtaata
      121 ttaattgcta tattgagatt ttttggttat gctgagataa ctgagaatgt agatgttgaa
      181 ttgtctgata ctgctattgc tgatagaaga ggaacggtat gtttatatgt accaaacaaa
      241 gctgctactg aactagctaa aaataatgca aagccaacat ggcaagaaat tcttaatcaa
      301 ttattcataa cgcagggcat tccaataggt gacgttaaat atatattata cacagaagta
      361 aatgagttat ttcaatcaaa atcgaggtgt aactataatt tgtatgttgt tcatggacca
      421 gatgacttat cgtatactgc acaactacta cttaataagt gggaatgtac tgactataat
      481 tttaatgttt attattatga acaacaagaa agacattact taaagttcaa aagttcaggt
      541 actaattgtg ttgcggttgc ttgtcctata gattcaacga ctttaggaat tggatgtgtc
      601 tcgactgatg tgaaaacata tgaatcagta acccaacacg atgcgtttat agatctgatt
      661 gatcaacaga aatatagaat gaatataacg ggtacacaag ccataaactg ttattatcaa
      721 gattgtaaat tagttggacc agattattcc tcatatctaa ttgttgcttc aacagaaagt
      781 tattttagaa atgttgatgg tgacttagat ccattgactc aggctggagc aagaatgtca
      841 cgtataaatt ttaagcagtg gtggcaggta ttttatcaaa ttgtacaaat gattaataat
      901 ataataaatc agatgaccaa aactggtact tactatgcgt ataatttgta tagataaata
      961 atcattaacg ttgcgaacaa cattatgacc
//