LOCUS       NC_021629                706 bp    RNA     linear   VRL 13-AUG-2018
DEFINITION  Rotavirus F chicken/03V0568/DEU/2003 segment 10, complete sequence.
ACCESSION   NC_021629
VERSION     NC_021629.1
DBLINK      Project: 210412
            BioProject: PRJNA485481
KEYWORDS    RefSeq.
SOURCE      Rotavirus F chicken/03V0568/DEU/2003
  ORGANISM  Rotavirus F chicken/03V0568/DEU/2003
            Viruses; Riboviria; Orthornavirae; Duplornaviricota;
            Resentoviricetes; Reovirales; Sedoreoviridae; Rotavirus; Rotavirus
            F.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Kindler,E., Trojnar,E., Heckel,G., Otto,P.H. and Johne,R.
  TITLE     Analysis of rotavirus species diversity and evolution including the
            newly determined full-length genome sequences of rotavirus F and G
  JOURNAL   Infect. Genet. Evol. 14, 58-67 (2013)
   PUBMED   23237956
REFERENCE   2  (bases 1 to 706)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUL-2013) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 706)
  AUTHORS   Johne,R., Trojnar,E., Kindler,E. and Otto,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2012) Food Hygiene and Safety Concepts, Federal
            Institute for Risk Assessment, Diedersdorfer Weg 1, Berlin 12277,
            Germany
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to JQ920003.
            
            ##Assembly-Data-START##
            Assembly Method       :: SeqBuilder v. 7.2.1
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Rotavirus F chicken/03V0568/DEU/2003"
                     /mol_type="genomic RNA"
                     /strain="chicken/03V0568/DEU/2003"
                     /host="chicken"
                     /db_xref="taxon:994994"
                     /segment="10"
                     /country="Germany"
                     /collection_date="2003"
     gene            18..674
                     /locus_tag="M908_s10gp1"
                     /db_xref="GeneID:16028496"
     CDS             18..674
                     /locus_tag="M908_s10gp1"
                     /codon_start=1
                     /product="NSP5"
                     /protein_id="YP_008145317.1"
                     /db_xref="GeneID:16028496"
                     /translation="MSMDLDIDLANCVIDSSSIIGGSNTGSRLPFTQAASYTTTSLAG
                     LEEAENERRKAIEYSKYMLEKQDLGPNDSASNDGMNEWSVSSRSFSTNESNMESVNNF
                     EINLPSDHSCVSVKSSNSMNSQNSQNFKSAVQSITQHQSRIRENPKPQKQYQQKKRKH
                     KEKAVIDAISDDEWGNRVESFDESSDSDTCNNSCKCCKRYKKLKKSVKHTVAKLISDL
                     "
     misc_feature    108..671
                     /locus_tag="M908_s10gp1"
                     /note="Rotavirus NS26; Region: Rota_NS26; pfam01525"
                     /db_xref="CDD:144935"
ORIGIN      
        1 ggcttttaat tgctaccatg agcatggatc ttgatataga cttagccaac tgtgttattg
       61 attcaagttc aataatagga ggatctaata ctggatctag attacctttt acgcaagcag
      121 catcttacac taccacatct cttgctggtt tggaggaagc ggagaatgaa cgaagaaagg
      181 caatagagta ttcaaaatat atgctagaaa aacaagattt aggtccaaat gattccgctt
      241 cgaacgacgg aatgaatgaa tggtcagtat catcaagatc tttttctaca aatgagtcaa
      301 atatggaatc tgttaataat tttgaaatta acctaccgtc tgaccattct tgtgtttcag
      361 ttaagtcatc taattcgatg aattcacaaa attcacaaaa tttcaagtcc gcagtgcaaa
      421 gcattactca gcatcaatca cgaattaggg agaatcctaa accacaaaag cagtatcaac
      481 aaaagaagag gaaacataaa gaaaaggctg tgattgatgc catttctgat gatgaatggg
      541 gaaatagagt agagtcattt gatgaatcat cggattcaga cacctgtaat aatagttgta
      601 agtgttgcaa gcgctacaag aaactaaaga aaagtgtgaa gcatacagtg gctaagctta
      661 tatccgatct ataatcatgc ggtgatcccc acactgacct gtgacc
//