LOCUS       NC_021632               1791 bp    RNA     linear   VRL 13-AUG-2018
DEFINITION  Rotavirus F chicken/03V0568/DEU/2003 segment 5, complete sequence.
ACCESSION   NC_021632
VERSION     NC_021632.1
DBLINK      Project: 210412
            BioProject: PRJNA485481
KEYWORDS    RefSeq.
SOURCE      Rotavirus F chicken/03V0568/DEU/2003
  ORGANISM  Rotavirus F chicken/03V0568/DEU/2003
            Viruses; Riboviria; Orthornavirae; Duplornaviricota;
            Resentoviricetes; Reovirales; Sedoreoviridae; Rotavirus; Rotavirus
            F.
REFERENCE   1  (bases 1 to 1791)
  AUTHORS   Kindler,E., Trojnar,E., Heckel,G., Otto,P.H. and Johne,R.
  TITLE     Analysis of rotavirus species diversity and evolution including the
            newly determined full-length genome sequences of rotavirus F and G
  JOURNAL   Infect. Genet. Evol. 14, 58-67 (2013)
   PUBMED   23237956
REFERENCE   2  (bases 1 to 1791)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUL-2013) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1791)
  AUTHORS   Johne,R., Trojnar,E., Kindler,E. and Otto,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2012) Food Hygiene and Safety Concepts, Federal
            Institute for Risk Assessment, Diedersdorfer Weg 1, Berlin 12277,
            Germany
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to JQ919999.
            
            ##Assembly-Data-START##
            Assembly Method       :: SeqBuilder v. 7.2.1
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Rotavirus F chicken/03V0568/DEU/2003"
                     /mol_type="genomic RNA"
                     /strain="chicken/03V0568/DEU/2003"
                     /host="chicken"
                     /db_xref="taxon:994994"
                     /segment="5"
                     /country="Germany"
                     /collection_date="2003"
     gene            27..1670
                     /locus_tag="M908_s5gp1"
                     /db_xref="GeneID:16028502"
     CDS             27..1670
                     /locus_tag="M908_s5gp1"
                     /codon_start=1
                     /product="NSP1"
                     /protein_id="YP_008145320.1"
                     /db_xref="GeneID:16028502"
                     /translation="MASLLVKLYYILRLLGVTYSHQVVGNKFLKRHLKTTLGIVPTDE
                     WRETPCTQQSLVTGCCLSCGRVRSLFSCILCHVPHICHNCLSLNLLICPFVPMKNRFE
                     ITAIYKKKENETTFTITDLKLMIGKWFDLLSIGEKRLEKIQRLRKQRLHYGLGNTIDL
                     NSFLIPYTVMKIETRNYVIYDLAYYDTVKSQNTSYSLINLDKLVGARQLISQNNFELI
                     QQRKFMGMSVVPATFTLNLVVERETWPVENDYPVYSQSYHYSKRVIVPLLASGKCAFV
                     KRQIDAGMRGLFEPVLPYRNQYILRLFVEQMVYEHRLKLNLVRYLPRYALEFKRQFGL
                     LNEYLSTLQIAEPISVAEALIHYCTHRHFSIQDCISCIASNEVVSQFRDWKIRRCNQL
                     NHIQWVQNRKCSCEEACNCMFQQLVSNEYTEYVSHDHSVCEDQDILRQCSRLSYAFTD
                     HESITNQSPLIDLTAAERISNSLETNDFVAYRLPIPSEFQSPEEYMEYVVLKFPQLPV
                     SVLNLIACECERIHNCVISLTEGAIKVIDDDGVSVIPMF"
ORIGIN      
        1 ggcttttaaa gtgtgccgat tcagagatgg cttcgctact ggttaagttg tactatattc
       61 tgcgtttact tggagttacg tactcgcatc aagtggttgg aaacaaattt ttgaaacgac
      121 atctgaaaac aacgctagga attgtaccaa cagatgaatg gagagaaaca ccatgcacgc
      181 aacaatcact ggtcactggc tgttgtcttt catgcggtag agtgagatca ttgttctcct
      241 gcattctttg tcatgtacca cacatatgtc ataattgcct atcactgaat ttactgatct
      301 gtccatttgt tccaatgaaa aatagatttg aaataacagc aatttataaa aagaaggaga
      361 atgaaactac tttcacaatc actgatttaa agttaatgat cggaaaatgg tttgatttgt
      421 tgtcaatagg tgaaaaaagg ctggaaaaaa ttcaaagact aaggaaacag agattgcatt
      481 atggacttgg aaatacaatt gatctaaatt cattcttgat tccatatact gtaatgaaaa
      541 ttgagaccag aaattacgtt atttacgatt tggcttatta tgatactgtg aaatcacaaa
      601 atacgagtta cagtttgatt aatttagata aattagttgg cgcaagacaa ttaatttctc
      661 aaaataactt tgaactaata caacaaagga aatttatggg tatgagtgta gttccagcaa
      721 cgtttacttt gaacctagta gtcgagcgag aaacatggcc ggtagagaat gattatccgg
      781 tatactcaca atcttatcat tattcgaaaa gagtgatcgt tcctttacta gcttcaggca
      841 aatgtgcatt tgttaaacgg caaattgatg ctggtatgag aggcctattc gaaccggttt
      901 taccctacag gaatcagtat attttaagat tattcgttga gcaaatggtt tatgaacata
      961 gattgaaatt aaatttggtt aggtacctac cacggtacgc attggaattt aagagacaat
     1021 ttggtttact taatgaatat ctttctactt tacaaatagc agaaccaatt tccgttgcag
     1081 aagctctaat tcattattgt acacacagac attttagcat ccaagattgt atatcatgta
     1141 tagcatcaaa tgaagtagtg tctcaatttc gtgattggaa aatacgcagg tgtaatcaac
     1201 ttaaccacat ccaatgggtg caaaatagaa aatgttcatg tgaagaagca tgtaactgta
     1261 tgtttcagca attagtatca aatgaataca cagaatatgt atcgcatgat cactcagttt
     1321 gtgaagacca agacatactt agacaatgca gtagattgag ctatgctttt actgatcatg
     1381 agtcaattac taatcagtca cctcttatag atctgacagc agctgaaaga atatcaaatt
     1441 ctttggaaac aaatgacttt gtagcttata gactaccaat acccagtgaa tttcaatcgc
     1501 ctgaagagta tatggaatac gtagtattga aatttccgca actaccagtt agtgtactga
     1561 acttaattgc gtgtgaatgc gaaaggatcc acaactgtgt aatatcacta actgaaggtg
     1621 caattaaagt aattgatgat gatggagttt ctgtaatacc gatgttttaa cacgtttcca
     1681 atcaatttaa tacaatcaat atgattagta taaaaattaa gtaattaatt aaccgtgtgc
     1741 gatgctgaat cggtgattgt gtagtagcag cgcaatcaac acggtttgac c
//