LOCUS       NC_021633               1309 bp    RNA     linear   VRL 13-AUG-2018
DEFINITION  Rotavirus F chicken/03V0568/DEU/2003 segment 7, complete sequence.
ACCESSION   NC_021633
VERSION     NC_021633.1
DBLINK      Project: 210412
            BioProject: PRJNA485481
KEYWORDS    RefSeq.
SOURCE      Rotavirus F chicken/03V0568/DEU/2003
  ORGANISM  Rotavirus F chicken/03V0568/DEU/2003
            Viruses; Riboviria; Orthornavirae; Duplornaviricota;
            Resentoviricetes; Reovirales; Sedoreoviridae; Rotavirus; Rotavirus
            F.
REFERENCE   1  (bases 1 to 1309)
  AUTHORS   Kindler,E., Trojnar,E., Heckel,G., Otto,P.H. and Johne,R.
  TITLE     Analysis of rotavirus species diversity and evolution including the
            newly determined full-length genome sequences of rotavirus F and G
  JOURNAL   Infect. Genet. Evol. 14, 58-67 (2013)
   PUBMED   23237956
REFERENCE   2  (bases 1 to 1309)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUL-2013) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1309)
  AUTHORS   Johne,R., Trojnar,E., Kindler,E. and Otto,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2012) Food Hygiene and Safety Concepts, Federal
            Institute for Risk Assessment, Diedersdorfer Weg 1, Berlin 12277,
            Germany
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to JQ920001.
            
            ##Assembly-Data-START##
            Assembly Method       :: SeqBuilder v. 7.2.1
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1309
                     /organism="Rotavirus F chicken/03V0568/DEU/2003"
                     /mol_type="genomic RNA"
                     /strain="chicken/03V0568/DEU/2003"
                     /host="chicken"
                     /db_xref="taxon:994994"
                     /segment="7"
                     /country="Germany"
                     /collection_date="2003"
     gene            73..1185
                     /locus_tag="M908_s7gp1"
                     /db_xref="GeneID:16028504"
     CDS             73..1185
                     /locus_tag="M908_s7gp1"
                     /codon_start=1
                     /product="NSP3"
                     /protein_id="YP_008145321.1"
                     /db_xref="GeneID:16028504"
                     /translation="MATEASMRHALKVLETTCEEVVKQIITEKGLVYARGEARRRLEY
                     VLDDTGIKGALICRAKTIDHALRGKMESAEKNHEYMTRIETVEKLESDLLQMRTQLSL
                     RGIDRKARVLASLFDVTPWKGSKVTSTVVMSDVAKEKFKNGSLRVADDCELWTNVRST
                     EMAVELEEAKRLLATRQEDLIQTRKAYQDVLAYAEKLNASIDLLKKQNSELSEKCQLW
                     EKMSKQKQLTTEERIIDTQRKEDSRLEKMERQLSTYTKLLEEQDKMLREERSERAYIE
                     AKYNTLLTQFASASEEEAPFDQVDGKFKITIECEMSLTSKILSMATGYGEIKRRYKHA
                     KKLIKSMANMAKLMVEVPDDNMEKEVDETNEISDVD"
     misc_feature    181..579
                     /locus_tag="M908_s7gp1"
                     /note="rotavirus non-structural protein 3 (NSP3); Region:
                     NSP3_rotavirus; cd20714"
                     /db_xref="CDD:411010"
     misc_feature    order(214..219,229..234,241..246,253..255,286..288,
                     295..300,325..327,337..342,346..354,358..363,391..393,
                     400..405,412..414,430..432,439..441,451..462,481..483,
                     493..495)
                     /locus_tag="M908_s7gp1"
                     /note="RNA binding site [nucleotide binding]; other site"
                     /db_xref="CDD:411010"
     misc_feature    475..>969
                     /locus_tag="M908_s7gp1"
                     /note="Uncharacterized conserved protein, contains DUF3084
                     domain [Function unknown]; Region: COG4372"
                     /db_xref="CDD:226809"
ORIGIN      
        1 ggcattttta aagctgttaa cgagaaggtt gcggcctaat tgttagtggt tttaaaagac
       61 ctgttattcg aaatggcaac tgaggcttcg atgagacatg ccttgaaagt tcttgagaca
      121 acatgtgaag aagtggtaaa gcagattatc actgagaaag ggctagttta cgccagagga
      181 gaagcacgca gaagattgga atatgtgtta gatgatacag gaattaaagg agcactgatt
      241 tgtagagcaa aaactattga tcatgcgctt agaggaaaaa tggaatcagc agagaaaaac
      301 catgagtata tgacgagaat agagactgtg gaaaaacttg agtctgacct gctacaaatg
      361 cgcacacaac tatcattacg tgggatagat cgtaaagcta gagtgctagc ttcattgttt
      421 gatgttacac cctggaaggg gtcgaaggtg actagtactg ttgtgatgtc agatgtagct
      481 aaagaaaagt ttaagaatgg ttcgttacgt gttgcagatg attgtgaatt gtggacaaat
      541 gttagatcta ctgaaatggc ggttgaactc gaagaagcga agagactgct ggcaacacgt
      601 caagaagatt taattcagac aagaaaggca tatcaagatg ttttggcata tgctgagaaa
      661 ctaaacgcta gcattgatct attgaagaaa cagaacagtg agttatctga gaaatgtcag
      721 ttgtgggaaa agatgtcaaa acaaaaacag ctaacaacgg aagagagaat tattgatact
      781 cagcgtaagg aggatagcag acttgaaaaa atggagagac aattgagtac atacactaag
      841 ctgcttgagg aacaagacaa aatgctgaga gaagagagat ctgagcgagc ttatattgaa
      901 gcgaaataca ataccctatt aacacaattt gcaagcgcat ctgaagagga agctcctttt
      961 gatcaagttg acggaaagtt taaaataaca attgaatgtg aaatgagttt gacaagcaaa
     1021 attctatcaa tggcaactgg ttacggggag attaagcgga gatataaaca tgcaaaaaag
     1081 ctaatcaaat ctatggcaaa catggcaaaa ttaatggtag aagttccaga tgataacatg
     1141 gagaaagaag tagacgagac taatgaaatc agtgatgtag attaaaaagt gagaattatt
     1201 taatcagaaa tcaatattta attgggcact ctaaaagcct cagtgtcatt gccaatacac
     1261 caattggacg aataacaata aaccagcatg acactggggt catatgacc
//