LOCUS       NC_023300               1017 bp ss-DNA     circular VRL 13-AUG-2018
DEFINITION  Black medic leafroll virus isolate Bjuv_153 segment DNA-C, complete
            sequence.
ACCESSION   NC_023300
VERSION     NC_023300.1
DBLINK      BioProject: PRJNA485481
KEYWORDS    RefSeq.
SOURCE      Black medic leaf roll virus (BMLRV-[SE;153])
  ORGANISM  Black medic leaf roll virus
            Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota;
            Arfiviricetes; Mulpavirales; Nanoviridae; Nanovirus.
REFERENCE   1  (bases 1 to 1017)
  AUTHORS   Grigoras,I., Ginzo,A.I., Martin,D.P., Varsani,A., Romero,J.,
            Mammadov,A.Ch., Huseynova,I.M., Aliyev,J.A., Kheyr-Pour,A.,
            Huss,H., Ziebell,H., Timchenko,T., Vetten,H.J. and Gronenborn,B.
  TITLE     Genome diversity and evidence of recombination and reassortment in
            nanoviruses from Europe
  JOURNAL   J. Gen. Virol. 95 (PT 5), 1178-1191 (2014)
   PUBMED   24515973
REFERENCE   2  (bases 1 to 1017)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2014) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1017)
  AUTHORS   Grigoras,I., Gronenborn,B. and Vetten,H.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-APR-2013) Institut des Sciences du Vegetal, Centre
            National de la Recherche Scientifique, Gif sur Yvette 91198, France
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to KC978960.
            GenBank Accession Numbers KC978958-KC978965 represent sequences
            from the 8 segments of Black medic leafroll virus.
            
            ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1017
                     /organism="Black medic leaf roll virus"
                     /mol_type="genomic DNA"
                     /isolate="Bjuv_153"
                     /isolation_source="plant tissue"
                     /host="Pisum sativum"
                     /db_xref="taxon:2038729"
                     /segment="DNA C"
                     /country="Sweden"
                     /collection_date="28-Jul-2010"
                     /collected_by="H.J. Vetten"
                     /acronym="BMLRV-[SE;153]"
     stem_loop       join(1000..1017,1..11)
                     /note="part of replication origin"
     misc_feature    join(1011..1017,1..2)
                     /note="conserved nonanucleotide at replication origin"
     gene            1..1017
                     /gene="Clink"
                     /locus_tag="AA78_sCgp1"
                     /db_xref="GeneID:18158302"
     regulatory      257..263
                     /regulatory_class="TATA_box"
                     /gene="Clink"
                     /locus_tag="AA78_sCgp1"
     CDS             302..814
                     /gene="Clink"
                     /locus_tag="AA78_sCgp1"
                     /codon_start=1
                     /product="cell cycle link protein"
                     /protein_id="YP_008997798.1"
                     /db_xref="GeneID:18158302"
                     /translation="MGLRYFSVLPEELKEKIVREHMREERKTEFLEKAIEDSCRRYEA
                     FITEDPSYEDLLSLSKFLDSLVNYVGDKLNTRCLIKWKKDVPVKVKYGVMEEQHIQLY
                     GPLDMEDMLCGELLLPEEDEDDITYEDGMIVHCSQLDRLFSDLGINVTYITVSNKCIC
                     TPLNKEVVIV"
     regulatory      827..833
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Clink"
                     /locus_tag="AA78_sCgp1"
ORIGIN      
        1 acccccgccc cgggttcagc agagtcatac ggacgaaaca atgaccgtta gatggaatgg
       61 atacgtggat ggctgagatt aattgtcaaa tgaaagaaga aactaataag cgtgcggagt
      121 acgcgtgaga cataatggtc cccactagta tgcctttact ttactttaag taaaggttgg
      181 atacagctgt aacgcgtctt cttttgcacg ccactaattc tctttccttc gaggcgaagg
      241 aaagcatctc tctgcctata taagcatcgt cttcgttgtg ttcatccaca caacgaattc
      301 aatgggtttg agatattttt ctgttctgcc ggaagaattg aaggagaaga ttgttcgaga
      361 gcatatgaga gaagagagga agactgagtt cttagagaag gctattgaag atagctgtag
      421 aagatatgaa gcgtttataa cagaagatcc gtcatatgag gatcttcttt ctctgagtaa
      481 gtttttagat tcattagtta attacgttgg tgataaattg aacacaaggt gtttaattaa
      541 atggaagaaa gatgtcccag tcaaggttaa gtatggagtt atggaagaac aacatattca
      601 gctctatggt cctttagaca tggaggatat gttatgtggt gagttgttgc tacccgaaga
      661 agatgaagat gatattacat atgaagatgg tatgatagtt cattgcagtc agttagatag
      721 attatttagt gatttaggaa ttaatgtaac ttatattact gtaagtaata aatgtatttg
      781 tactcctttg aacaaggagg ttgtaattgt atgataccat taaatgaata aaatgataat
      841 tgttgtattt attacaactc tacctatcac tcacaatatt gaatataatt tatgaataat
      901 acttccgcga agcggcatgg agaaaataat tatgataaat aatgagttag gctttgtata
      961 aataatatca agtgacgtca cttgatcccg tgctgagctg gggcggggct tagtatt
//