LOCUS NC_028392 2670 bp RNA linear VRL 13-AUG-2018
DEFINITION Shuangao insect virus 7 strain SKC segment 4, complete sequence.
ACCESSION NC_028392
VERSION NC_028392.1
DBLINK BioProject: PRJNA485481
KEYWORDS RefSeq.
SOURCE Shuangao insect virus 7
ORGANISM Shuangao insect virus 7
Viruses; Riboviria.
REFERENCE 1 (bases 1 to 2670)
AUTHORS Shi,M., Lin,X.D., Vasilakis,N., Tian,J.H., Li,C.X., Chen,L.J.,
Eastwood,G., Diao,X.N., Chen,M.H., Chen,X., Qin,X.C., Widen,S.G.,
Wood,T.G., Tesh,R.B., Xu,J., Holmes,E.C. and Zhang,Y.Z.
TITLE Divergent viruses discovered in arthropods and vertebrates revise
the evolutionary history of the Flaviviridae and related viruses
JOURNAL J. Virol. (2015) In press
PUBMED 26491167
REMARK Publication Status: Available-Online prior to print
REFERENCE 2 (bases 1 to 2670)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (16-NOV-2015) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2670)
AUTHORS Shi,M., Lin,X.-D., Vasilakis,N., Tian,J.-H., Li,C.-X., Chen,L.-J.,
Eastwood,G., Diao,X.-N., Chen,M.-H., Chen,X., Qin,X.-C.,
Widen,S.G., Wood,T.G., Tesh,R.B., Xu,J., Holmes,E.C. and
Zhang,Y.-Z.
TITLE Direct Submission
JOURNAL Submitted (15-MAY-2015) Department of Zoonosis, State Key
Laboratory for Infectious Disease Prevention and Control, National
Institute of Communicable Disease Control and Prevention, Chinese
Center for Disease Control and Prevention, Changping Liuzi 5,
Beijing, Beijing 102206, China
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to KR902720.
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..2670
/organism="Shuangao insect virus 7"
/mol_type="genomic RNA"
/strain="SKC"
/host="Chrysopidae sp."
/db_xref="taxon:1746063"
/segment="4"
/country="China"
/collection_date="2013"
/note="identical sequence found in hosts Psychoda
alternata and Diptera sp."
gene 92..862
/gene="VP2"
/locus_tag="AS153_s4gp1"
/db_xref="GeneID:26217608"
CDS 92..862
/gene="VP2"
/locus_tag="AS153_s4gp1"
/codon_start=1
/product="putative capsid protein"
/protein_id="YP_009179394.1"
/db_xref="GeneID:26217608"
/translation="MLGIMINLIMLVAVMGIDDHEYTISQCADYPEDWRIAACASSLK
ARSLITKTTFNSYLELAKSKGGVLNEYYSVGLTIGVSNRLVVGKINDPVFERSYGVGY
NPASLYGKPMWVDMGHEHEKMTILYLVNDIPGIPEWDGSRMNRLQHKGTGEITALYKA
PNQGPVTLKEKENCSKLTKWMHENIQTGLKGITIAVGPDMWCPVLRDGLASMVVAEMH
SLKYLSEDGSMSNRWTVKRAMWKDGSFGDAKAFDSVFM"
gene 787..2373
/gene="VP3"
/locus_tag="AS153_s4gp2"
/db_xref="GeneID:26217607"
CDS 787..2373
/gene="VP3"
/locus_tag="AS153_s4gp2"
/codon_start=1
/product="hypothetical protein"
/protein_id="YP_009179395.1"
/db_xref="GeneID:26217607"
/translation="MDSETSYVEGWKLWGCQSFRFGFYVRQTDDGEPSAATEPPIQER
KLEEPWEVGVDREEMEKARRIREEAEAIEEKRKIKWSKDLNAVANFNKIWFPPLLEEP
IVHVLRTKLPNLDRDYLAWTVLTAEVLLYVLMSYMVGKVSHVLVFIMHLGLSLYFEEN
GVFMAFAAFWILNKACRIFTRPKEYRIYEELHYATPRDGPFIKAYEPLIYLAVLLGTS
YLLHGTSFGSTFGSVWILVVIIVMSKMVPGVGGNSTMGLMTFIVVLIIGIATVPEIWS
SLILVTKRAIAPAEVASGPPKWYGGVASWATSLPVIGYSFNTLWDVLRKMCCYVPLIW
IAIDDIRGPGLGISKAWETHAKKDSLLGHGTAALYKGAGWLPVVVECVLLWWRGSMVE
IVILWVVAVLTWLAWDVFGRNEWIGRGAGMTVTTVRPGWRTVFGHGPEGLRVMVFQIS
TLAAWLILFISTMSQVSMLGVAFLLTVLNKERALALMLGIGTLSPVWLWRAWKSDKPM
TESLNQNSVDAHPPGAEYIE"
ORIGIN
1 gcggtgattt gacataattc tgttaaaata ctaggcagat actgtttgtc agatttgacg
61 cactatacga agaatcttat cactaataaa tatgttaggg attatgatta atcttatcat
121 gctcgtggcc gtcatgggaa ttgacgacca cgagtatacc atcagccaat gtgcagacta
181 tcctgaagat tggcgaattg cagcttgcgc atctagcctg aaggctaggt cgctcattac
241 aaagacaact tttaacagtt acctcgaact ggcaaagtca aaggggggag tgctcaatga
301 gtactactcc gtcggcttaa caattggagt gtccaaccga cttgttgtag gcaaaataaa
361 cgatccggtc tttgaaagaa gctatggagt tggatataat ccagcttcat tgtacggaaa
421 acccatgtgg gtggacatgg gtcatgaaca tgagaagatg acaatattat atctggtgaa
481 tgatatacca ggtataccag aatgggatgg atcaagaatg aacaggctac agcacaaggg
541 tacaggagag attacagcct tgtataaggc gcctaaccaa ggacctgtca ctctgaagga
601 gaaagagaac tgttcaaagt taaccaagtg gatgcatgaa aacattcaaa cgggacttaa
661 aggtataact atagctgtcg ggccagacat gtggtgccca gtgctacgtg atggattggc
721 gagcatggtg gttgcagaaa tgcatagttt gaaatatcta agcgaggatg gaagcatgag
781 caacagatgg acagtgaaac gagctatgtg gaaggatgga agctttgggg atgccaaagc
841 tttcgattcg gtttttatgt aaggcagacg gacgatggcg agccgtctgc cgcaacagag
901 cccccaatcc aagaaagaaa gttagaggaa ccttgggaag taggagtgga tagagaagag
961 atggaaaaag caagaaggat ccgagaagag gctgaggcaa ttgaggagaa aaggaagatc
1021 aaatggtcga aagacctaaa cgcagttgcc aatttcaaca aaatctggtt tcctccatta
1081 ttggaggaac caattgtcca cgtattgaga acgaagttgc ctaatttgga cagggattac
1141 ctggcatgga cggtcctgac agctgaggtg ctgctatatg tattgatgtc atatatggtc
1201 ggaaaggtct cacatgtatt ggtttttatc atgcatctgg gacttagtct gtactttgag
1261 gaaaacggag tattcatggc atttgcggca ttttggatac tgaacaaagc gtgtcggata
1321 tttactagac ccaaggaata ccgaatctat gaggaactgc attatgctac acctagagat
1381 gggccattca taaaggctta tgaaccgtta atctacttgg cagtcttgtt gggaacatca
1441 tatctactac atggtacgtc atttggtagc acttttggtt ccgtgtggat actagtggtt
1501 ataatagtga tgtcaaaaat ggtccctgga gttggaggca actccaccat gggattaatg
1561 accttcatag tagtcctcat aataggaata gcgacagttc cggagatttg gagcagcttg
1621 atactggtga caaagagggc aatagcacca gctgaggtgg cctctgggcc acctaagtgg
1681 tatggagggg tggccagttg ggccacctct ttaccagtaa tcggatactc attcaacact
1741 ttgtgggatg ttttaaggaa gatgtgctgt tatgtgccac tgatatggat agccatagat
1801 gatatcaggg gcccaggttt gggcatatca aaggcgtggg aaacccacgc aaagaaagac
1861 tcgttgttgg ggcatggcac tgcagctttg tacaaggggg ccggatggct tcctgtagtg
1921 gttgagtgtg tcttgctttg gtggcgagga agtatggtag aaatagtcat cctgtgggtt
1981 gttgctgtgt tgacttggct ggcttgggat gtgttcggta gaaatgaatg gataggacga
2041 ggtgctggaa tgactgtgac aacagttaga cctggatgga gaactgtttt tggacatggc
2101 ccggaaggat tgagggtaat ggtattccag atatcgaccc tggctgcatg gctgatattg
2161 ttcatatcga ccatgagtca ggtgtctatg cttggggtgg ccttcctgtt gacggtgttg
2221 aataaggaaa gggcgttagc tttaatgtta ggtataggga cattaagccc tgtgtggttg
2281 tggagagcct ggaaatcaga caaaccaatg acggagagtt tgaaccagaa tagtgttgat
2341 gcacacccac caggagcaga atatatagaa taagattaat taattgcctg ttaaggacta
2401 gaggttagag gagacccacc gagaggtgcc gtaacaggtg cggtgaggct agaggttaga
2461 ggagacccat gcttgcatgc tcaccataat gataagataa aagcgttttt gattgcagtg
2521 tgaatgtacg aatgtttgaa gagtgtatta gagtttagtg acccaggagt ataaatttgt
2581 gggtgaggcg aaactgtgat ctaaagcatg cgtccagatc cacctactgg aagcatactg
2641 ctggataaat gcttaagaaa acgactcccc
//
