LOCUS NC_028397 2756 bp RNA linear VRL 13-AUG-2018
DEFINITION Shuangao insect virus 7 strain SKC segment 3, complete sequence.
ACCESSION NC_028397
VERSION NC_028397.1
DBLINK BioProject: PRJNA485481
KEYWORDS RefSeq.
SOURCE Shuangao insect virus 7
ORGANISM Shuangao insect virus 7
Viruses; Riboviria.
REFERENCE 1 (bases 1 to 2756)
AUTHORS Shi,M., Lin,X.D., Vasilakis,N., Tian,J.H., Li,C.X., Chen,L.J.,
Eastwood,G., Diao,X.N., Chen,M.H., Chen,X., Qin,X.C., Widen,S.G.,
Wood,T.G., Tesh,R.B., Xu,J., Holmes,E.C. and Zhang,Y.Z.
TITLE Divergent viruses discovered in arthropods and vertebrates revise
the evolutionary history of the Flaviviridae and related viruses
JOURNAL J. Virol. (2015) In press
PUBMED 26491167
REMARK Publication Status: Available-Online prior to print
REFERENCE 2 (bases 1 to 2756)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (16-NOV-2015) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2756)
AUTHORS Shi,M., Lin,X.-D., Vasilakis,N., Tian,J.-H., Li,C.-X., Chen,L.-J.,
Eastwood,G., Diao,X.-N., Chen,M.-H., Chen,X., Qin,X.-C.,
Widen,S.G., Wood,T.G., Tesh,R.B., Xu,J., Holmes,E.C. and
Zhang,Y.-Z.
TITLE Direct Submission
JOURNAL Submitted (15-MAY-2015) Department of Zoonosis, State Key
Laboratory for Infectious Disease Prevention and Control, National
Institute of Communicable Disease Control and Prevention, Chinese
Center for Disease Control and Prevention, Changping Liuzi 5,
Beijing, Beijing 102206, China
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to KR902719.
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..2756
/organism="Shuangao insect virus 7"
/mol_type="genomic RNA"
/strain="SKC"
/host="Chrysopidae sp."
/db_xref="taxon:1746063"
/segment="3"
/country="China"
/collection_date="2013"
/note="identical sequence found in hosts Psychoda
alternata and Diptera sp."
gene 80..2491
/locus_tag="AS153_s3gp1"
/db_xref="GeneID:26217620"
CDS 80..2491
/locus_tag="AS153_s3gp1"
/codon_start=1
/product="NS3-like protein"
/protein_id="YP_009179402.1"
/db_xref="GeneID:26217620"
/translation="MFGQVKLLKLGVIDMRLSMFVTLMIGNCVTTFTSHMKWWAPILY
YVLVVEKGLMEWKRKESSTVYYVLMGLLLFFGIHYLMPTVFFLVLHWDQGKLRKTGPI
FDGLFLPIYEWMQEVSIPVAKPLVGVHEGYSTLVRDWFEDLREGYSNFFYTGFDTRIE
FIRDNGVTTTPLPIKDRPALEASRVHSRYAELGYQGRVVLFMLVTMVTFYFSGPLALL
MMLGLVVVGGDSDEPKATFNEKNRGTTFRDGVYHVANTVIGYELTNGIGVGFGGVFHV
PYHVTRGQSIVYGRTRVYPYYVNPDQDIVTYGGPPNVVSYQAGDKVFVNCETIQSRTS
YEVQVDVDRMGNVVTWQGVTKPGESGSPVYAWRDEGMVLLGLAGRYIKEPTGVVEYTN
VEPIVRGESMIEQITSHPGSGKTWKIIPDIVTKGVMSLNGKKVLVAGPTRVVCRELHK
SMQNLGIRVGLNIRGSLDRVEAAPVQIAAHRTALKMLVTGSPLLRNLGLIVIDEAHMD
DTATKLLRKYARHLMDMGVRTIELSATLDGITNDGSNHTINDIKIHPTDIEECIRERL
EDGKRVLLFVPSIHGTLATRVARNFKEHKPIRLSRDTFETAMKEIPDVERQLIISTDI
AECGINIPELDTVVDSGEKFTYVMEGNIIIGKKVGLTLASRTQRRGRVGRTKIGEYIE
VASKHDNDYISASTFDADLLAAGRGWATGKTEWPLTLTDNQFRKWLDTDLTPLEIYLD
YDGSGLERSENNKRIVHSSIKGGGLNYEGCGKCELCRGAYYMYDERAHDRIIHGKLRK
AVMLN"
misc_feature 1280..1714
/locus_tag="AS153_s3gp1"
/note="N-terminal helicase domain of the DEAD-box helicase
superfamily; Region: DEAD-like_helicase_N; cl28899"
/db_xref="CDD:452890"
misc_feature order(1307..1327,1586..1588)
/locus_tag="AS153_s3gp1"
/note="putative ATP binding site [chemical binding]; other
site"
/db_xref="CDD:350670"
misc_feature 1784..2101
/locus_tag="AS153_s3gp1"
/note="C-terminal helicase domain of the DEAD-like
helicases; Region: DEAD-like_helicase_C; cl38915"
/db_xref="CDD:365791"
misc_feature 2090..2092
/locus_tag="AS153_s3gp1"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:350171"
ORIGIN
1 tggcctgatt ttgtttaaaa tatttgaata ctagatattt ggttataata aaatttgggt
61 catctgaata aaggcaaaga tgtttgggca ggttaagctg ctcaagctag gggtgataga
121 catgcgatta agcatgttcg tcaccttgat gataggcaat tgtgtgacaa catttacgtc
181 acacatgaag tggtgggccc ctattctcta ctacgtattg gtggttgaga aggggctcat
241 ggaatggaaa cggaaggaat cttcgacagt gtattacgtc ctgatgggac ttttgttgtt
301 cttcgggata cattacctca tgccaacagt gtttttcttg gtccttcatt gggatcaagg
361 gaagctaagg aaaacaggac caatctttga cgggttgttc ttgcccatat acgaatggat
421 gcaggaggtc tccataccgg tggccaaacc actggtagga gtgcacgagg gctactcaac
481 tttagttagg gattggtttg aggacctgag agagggttac tctaacttct tttacaccgg
541 ttttgacaca cgcattgagt tcattagaga caatggagtt accaccaccc ccctgcccat
601 taaagaccgt ccagctttgg aagcgtctag agttcacagc agatatgcgg aacttgggta
661 ccagggcaga gtggtcttgt ttatgttggt gacaatggtc accttctatt tttcaggacc
721 tctggccttg ttgatgatgc tgggtctggt cgtggttgga ggagactctg atgaacctaa
781 ggccaccttc aatgagaaaa acaggggtac aacttttaga gatggcgtgt accatgtggc
841 taacacagtg attggatatg aattgaccaa tggcataggg gttggctttg gaggagtgtt
901 ccacgtaccg tatcatgtca ctagaggaca gagcatagtg tatgggagaa cgagagttta
961 cccatactat gtcaatcctg accaagatat agtgacttat ggtggaccac ccaatgttgt
1021 atcgtatcag gcaggagaca aagtgtttgt taactgcgag acaatccaaa gcagaacctc
1081 ttatgaggtg caggtggacg tggatagaat gggtaacgtt gtcacctggc aaggtgtgac
1141 caaaccagga gaatcagggt caccagtata tgcttggaga gatgaaggaa tggtattact
1201 tggattggct ggaagataca tcaaggaacc aactggagtc gttgaatata cgaacgttga
1261 accaatagtg agaggtgaat ccatgatcga acagataacg tctcacccag gatcagggaa
1321 aacttggaag atcataccgg acatagtcac caaaggagtc atgagtttaa atgggaagaa
1381 ggtccttgtg gctgggccca cacgagttgt ttgcagagag ttgcataaga gtatgcagaa
1441 tttgggaatt cgtgttggtc tgaacatccg gggatcattg gacagagtgg aagcagcccc
1501 tgtccaaata gccgcacaca gaacagcatt aaagatgctt gtgaccggct caccattgtt
1561 aaggaacctt ggtttgatag tcattgatga ggcacacatg gatgatacag caacgaagct
1621 actacgaaaa tacgcaaggc atctcatgga catgggagtg agaactattg agctgtctgc
1681 tacattggat gggattacga acgatggcag caaccacacc attaatgata taaagatcca
1741 cccaacagat atagaagaat gtatcaggga acggttggaa gatgggaaga gggtgttgtt
1801 gtttgtccca tccatccatg gcaccctggc gacgcgagtc gccaggaatt ttaaagaaca
1861 caaaccgatc aggctgtcaa gggatacttt tgagacagcc atgaaggaaa taccagatgt
1921 ggagagacag ttgataatca gtaccgatat agccgagtgt ggcataaata taccagaact
1981 ggacaccgtt gtggactctg gagaaaagtt cacatacgtt atggaaggaa acatcataat
2041 aggaaagaaa gttggattaa ccttagcctc aagaactcaa cggcgaggta gagttggaag
2101 aaccaagata ggggagtaca tagaagtggc cagcaagcat gataatgatt acatatcagc
2161 atcaacattt gatgctgact tgttggctgc cggaagagga tgggccactg gtaagacaga
2221 atggcccttg acgttgacag acaaccaatt tagaaaatgg ttggacactg atttaacacc
2281 actagaaata tacctagact atgacggttc aggattagag agatctgaaa ataacaagcg
2341 gattgtgcac tcaagcatca aaggaggagg cttgaactat gaaggatgtg gaaaatgcga
2401 attgtgtagg ggagcgtact atatgtacga cgagcgagcg catgatcgca taattcatgg
2461 aaagttgcgc aaggctgtta tgctgaacta aatcagggaa tgatggatga cgattaaaga
2521 agcactggaa gtagtagagg tttcgcagac ccgcatagcg accaaggtgc taacggaaac
2581 aaaacatttt gaagattgga aatagtcatt ggggtgattg cccataataa ggatggaatc
2641 gtgatgccct ggagcccata ataccaggaa aaagcgataa cgaatctttg cctgcccaag
2701 tctagctgca tactagcgaa catactaagg cttgggctta caatagaaac ggggcg
//
