LOCUS       NC_033270               2143 bp    DNA     circular VRL 13-AUG-2018
DEFINITION  Chicken stool-associated gemycircularvirus strain RS/BR/2015,
            complete genome.
ACCESSION   NC_033270
VERSION     NC_033270.1
DBLINK      BioProject: PRJNA485481
KEYWORDS    RefSeq.
SOURCE      Chicken stool-associated gemycircularvirus
  ORGANISM  Chicken stool-associated gemycircularvirus
            Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota;
            Repensiviricetes; Geplafuvirales; Genomoviridae; Gemykrogvirus;
            Gemykrogvirus galga2.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Lima,D.A., Cibulski,S.P., Finkler,F., Varela,A.P.M., Teixeira,T.F.,
            Cerva,C., Domingues,G., Loiko,M., Scheffer,C.M., Santos,H.F.,
            Mayer,F.Q. and Roehe,P.M.
  TITLE     Fecal virome of healthy chickens reveals a large diversity of the
            eukaryote viral community, including novel circular single-stranded
            DNA viruses
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2143)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JAN-2017) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 2143)
  AUTHORS   Lima,D.A., Cibulski,S.P., Finkler,F., Varela,A.P.M., Teixeira,T.F.,
            Cerva,C., Domingues,G., Loiko,M., Scheffer,C.M., Santos,H.F.,
            Mayer,F.Q. and Roehe,P.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) Microbiologia, Parasitologia e Imunologia,
            Universidade Federal do Rio Grande do Sul, Rua Sarmento Leite, 500,
            Porto Alegre, Rio Grande do Sul 90035-190, Brazil
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to KY056250.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Chicken stool-associated gemycircularvirus"
                     /mol_type="genomic DNA"
                     /strain="RS/BR/2015"
                     /isolation_source="feces"
                     /host="Gallus gallus"
                     /db_xref="taxon:1930298"
                     /country="Brazil"
                     /collection_date="31-Jul-2015"
                     /collected_by="Diane Lima"
     gene            1..615
                     /locus_tag="BWS40_gp1"
                     /db_xref="GeneID:30855480"
     CDS             1..615
                     /locus_tag="BWS40_gp1"
                     /codon_start=1
                     /product="replication associated protein"
                     /protein_id="YP_009337824.1"
                     /db_xref="GeneID:30855480"
                     /translation="MTRFRLRAKIFFLTYSQIGEDVIQELRSTPTQHFRFIEEVLGTP
                     SDYRLSRESHQDGASHLHCVVGYAETQLVNSASLFDYRGAHPNIKSIRGTIKKPWNYA
                     GKDGDIIHELGGPNGGDSGTGGSIAERWSHAIDAPTEDEFFERVRMADPRSYVLFNRA
                     IVQYANKIYRKPREYTSPRFRLLGGSRIEGWLSQSDLGRRGGER"
     misc_feature    10..333
                     /locus_tag="BWS40_gp1"
                     /note="Geminivirus Rep catalytic domain; Region:
                     Gemini_AL1; pfam00799"
                     /db_xref="CDD:366313"
     gene            complement(1125..2069)
                     /locus_tag="BWS40_gp2"
                     /db_xref="GeneID:30855479"
     CDS             complement(1125..2069)
                     /locus_tag="BWS40_gp2"
                     /codon_start=1
                     /product="capsid protein"
                     /protein_id="YP_009337825.1"
                     /db_xref="GeneID:30855479"
                     /translation="MGYFEENGYSLSTGLHHSEMAYSRFRRRRSFRRRPARTLRRSQH
                     KRTVRRRRFVRRPRRRMTSRRVRNIASRKKHDTQLGADSNADDSSNPVQLHAGNNYYL
                     WAPSYLEQHEESYDYVRNNQNVYFRGVQDRVFLSAAFAFTWRRVCFFSYEQFIPALPF
                     FVEAPNEDDPQIMRRPLREITPKTASEFFSYAWKGTVGVDFSENTRWNAPLDDKLLTI
                     VYDRSVTINPNYAAPAGATFGKSMTRKMWHPVNKTMMYSDKENGSTPSSTGWTSMCPN
                     SPGNFYILDIFSTGQDLPGDLTGVGEFGSEATVYWHEN"
ORIGIN      
        1 atgacgcgat ttcgcttacg tgccaagatc ttttttctga cctattccca aatcggcgaa
       61 gatgtcatcc aggaactccg aagcacacct actcaacatt tccgttttat cgaagaagtg
      121 ttgggaactc cgagcgacta cagactttca agagagtcgc accaagatgg agcatctcat
      181 ctccactgcg tcgtgggtta tgcagagaca caattggtca attcagcgag tctcttcgac
      241 taccgaggag ctcacccgaa tattaaatca attcgaggca cgattaagaa gccctggaat
      301 tacgctggaa aggacggtga cattatccac gaactgggtg gacctaacgg aggagatagc
      361 ggaactggag gatcaattgc agagcgatgg agccacgcaa tcgatgctcc aactgaagac
      421 gagttttttg aaagagtgcg gatggctgat ccgagatctt atgtcctttt caatcgtgcg
      481 atcgtccaat acgccaataa gatctatcga aaaccaagag aatataccag ccccaggttt
      541 agacttcttg gcggaagtcg cattgaggga tggctcagtc agtccgacct tggtagacga
      601 ggaggagaga ggtaagaacc ccttatccta gtagggttgt tcgcgggatg gggcttcgcc
      661 ccaccggcct tcgccggagc cgtggacttc ccttccccca ccctgacggg aaagtgattg
      721 agcgtgccgc taatttctca tctctgcttg gggtttagac gacagtctct catcatctgg
      781 ggaccttcca gaaccggtaa gacggtttgg gcgcgttctt tgggcagaca gatctacatg
      841 aatggtcacc tcaacatcga caaatacgat gacgaggcag actacgcaat tttcgacgat
      901 attagtggtg gatttcaatt ctttccgagc tacaaggggt ggcttggctg ccaagaggaa
      961 ttcgaatgca cggacaaata ccgagccaag acgacaatct attgggggag accgacgatc
     1021 atgtgcatga actcggaccc cctggcagac ccacatgttg acgtggcctg gttactactg
     1081 aactgtgaaa ttgtgcacat cgaagatcca ttggtcgaaa ttatctagtt ctcatgccaa
     1141 tacactgttg cctcacttcc aaattcacca actccagtaa gatcaccggg taaatcctga
     1201 ccagtagaaa aaatatccaa aatgtaaaaa ttccccggag agtttggaca catggatgtc
     1261 caaccagtgc tcgaaggagt agagccattc tccttatccg aatacatcat agtcttatta
     1321 acagggtgcc acatctttcg agtcatagac ttcccgaaag tagcaccggc aggggccgcg
     1381 taattcggat taattgtgac agaccgatcg taaacaatag taagaagttt gtcatcaaga
     1441 ggggcattcc atcgagtgtt ctcagagaaa tcaacaccga cagtgccctt ccaagcgtac
     1501 gaaaaaaatt ccgacgcagt cttaggagta atctcacgta aggggcggcg cataatctga
     1561 ggatcatcct cattgggcgc ctcaacgaaa aaaggcaagg cggggataaa ctgttcgtaa
     1621 gagaagaaac aaacccgccg ccaagtaaag gcaaatgcgg cactcaggaa gacacgatcc
     1681 tgaactccgc ggaaatacac gttctgatta ttccgaacat aatcatacga ttcctcatgt
     1741 tgttccaaat aggaaggagc ccacaggtaa taattattac ctgcatgaag ttggacggga
     1801 ttagacgaat catcggcgtt agaatctgcg ccgagttggg tatcatgctt tttgcgtgac
     1861 gcaatattgc gaacacgacg agaagtcata cgacgtcggg gacgccgaac gaatcgtcta
     1921 cgacgcacgg ttcgcttgtg ttgggatcgt cgaagggtac gagcggggcg ccgacgaaaa
     1981 gagcgccgac gacgaaaacg agagtaagcc atttcggagt ggtgtagtcc ggtggacaag
     2041 gaataaccat tttcctcgaa gtaccccatg gtatttatag gtggtcaaag gtcaaaggtc
     2101 aaagctggcg ttacgaatct taaaacgcca gcctaccagt cac
//