LOCUS       NC_039059               2408 bp    DNA     circular VRL 24-AUG-2018
DEFINITION  Chicken associated huchismacovirus 1, complete genome.
ACCESSION   NC_039059
VERSION     NC_039059.1
DBLINK      BioProject: PRJNA485481
KEYWORDS    RefSeq.
SOURCE      Chicken associated huchismacovirus 1
  ORGANISM  Chicken associated huchismacovirus 1
            Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota;
            Arfiviricetes; Cremevirales; Smacoviridae; Huchismacovirus;
            Huchismacovirus chicas1.
REFERENCE   1  (bases 1 to 2408)
  AUTHORS   Lima,D.A., Cibulski,S.P., Finkler,F., Varela,A.P.M., Teixeira,T.F.,
            Cerva,C., Domingues,G., Loiko,M., Scheffer,C.M., Santos,H.F.,
            Mayer,F.Q. and Roehe,P.M.
  TITLE     Fecal virome of healthy chickens reveals a large diversity of the
            eukaryote viral community, including novel circular single-stranded
            DNA viruses
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2408)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (24-AUG-2018) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 2408)
  AUTHORS   Lima,D.A., Cibulski,S.P., Finkler,F., Varela,A.P.M., Teixeira,T.F.,
            Cerva,C., Domingues,G., Loiko,M., Scheffer,C.M., Santos,H.F.,
            Mayer,F.Q. and Roehe,P.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2016) Microbiologia, Parasitologia e Imunologia,
            Universidade Federal do Rio Grande do Sul, Rua Sarmento Leite, 500,
            Porto Alegre, Rio Grande do Sul 90035-190, Brazil
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to KY086301.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2408
                     /organism="Chicken associated huchismacovirus 1"
                     /mol_type="genomic DNA"
                     /strain="RS/BR/2015/2"
                     /isolation_source="feces"
                     /host="Gallus gallus"
                     /db_xref="taxon:2169932"
                     /country="Brazil"
                     /collection_date="31-Jul-2015"
                     /collected_by="Diane Lima"
     gene            1..747
                     /locus_tag="D1U58_gp1"
                     /db_xref="GeneID:37620352"
     CDS             1..747
                     /locus_tag="D1U58_gp1"
                     /codon_start=1
                     /product="replication associated protein"
                     /protein_id="YP_009508837.1"
                     /db_xref="GeneID:37620352"
                     /translation="MTSPRWYDITVSKAKCPEEILRKWLDENGERYAYGREKGTDGYE
                     HFQVRVVLKNPTSEQDMWKVWAPYGHVSPTHTRNFNYVLKEGDFVCSWIKIPESMKNP
                     VFRPWQQALMDLEQNDREVDVIIDLKGNTGKSWITRYLALKNKAINIPSGLGAKDIMR
                     MCLKRAVVPWYIFDMPRAIGKQSKELWSAIESIKNGYLWDDRYTWEEKWIDPPKVTVF
                     TNEYPKYDLISEDRLRFWAPAEVGLVALAK"
     gene            complement(1100..2017)
                     /locus_tag="D1U58_gp2"
                     /db_xref="GeneID:37620351"
     CDS             complement(1100..2017)
                     /locus_tag="D1U58_gp2"
                     /codon_start=1
                     /product="capsid protein"
                     /protein_id="YP_009508838.1"
                     /db_xref="GeneID:37620351"
                     /translation="MKQTYTYFIDLATSADKVQNISVSAGGEEAVRRLMPFFMAYKYF
                     KLGPVTVKFVPASTLPVDPTGLSYTAGENTVDPRDQFNPGLIRITNGEDIVPPANMDG
                     YYALMLDRRWYKFQLQSGARRTCYPRLWSVANLHQNIFPDEWKNYPKHSDLKVYNENT
                     IINDSDPVGATRSYEAGSDPRGLFQTGNNVRLDWLPTDASNAWDPNITNSYQTVNVPP
                     EVPVLDIILPQAYKTVYYYRVFVTETVYFKDPVALATHAVSVQNNYLTVNGVDKFIYP
                     QLAFGPRTVPRTAFPYQNDGSDFRTDTKA"
ORIGIN      
        1 atgacatcgc ctagatggta cgatataacc gtttctaagg caaaatgtcc tgaagaaatt
       61 ttaaggaagt ggttagatga aaacggagaa agatatgctt atggaagaga aaaaggaaca
      121 gatggatacg aacatttcca ggttcgagtt gtacttaaaa atcctacaag tgagcaagac
      181 atgtggaaag tatgggctcc ttatgggcat gttagcccta ctcatactag aaattttaac
      241 tatgttctaa aagaaggtga ttttgtatgc agttggataa aaataccaga gtctatgaaa
      301 aatccagtct tccggccttg gcaacaggca ttgatggacc tagagcaaaa cgacagagaa
      361 gtagacgtaa taatagattt aaaagggaat acagggaaat catggataac gcgatactta
      421 gccttgaaaa acaaggcgat caatatacct tctggcttgg gggcgaaaga tatcatgcga
      481 atgtgcttaa aacgagctgt ggtcccttgg tacatattcg atatgccgag agctataggg
      541 aaacagagca aggagttatg gagcgccatc gaatcaataa aaaacgggta cttgtgggac
      601 gatcgatata catgggagga aaaatggata gatccgccga aggtaacggt atttacaaac
      661 gagtatccaa agtacgacct aatctctgaa gatcggttaa ggttttgggc accggcggaa
      721 gtagggctag tagccttagc gaaataaagc ggggctttgg gcgctaccgc gtaacactgc
      781 gccccgctta ctaatatctt ttatattctt ttaaaccaag ggaatcttgg gagtgaaatg
      841 tccgaaatga gacacctttg tcggatatag gactaatggc gcttcgcgca atgataggta
      901 gtcagacagt ttggatcaga cgatcagaca tcagacaagt tagaaaaaaa aagattatgg
      961 agagaggttc tccataggta aatggttttc agggtcagag taagcctctt catcctgtgg
     1021 agtccagacc tcatcttcaa agagcatgag accacctggg actaatcttc gaccgttgag
     1081 gtatacatag gccataacat cacgccttag tgtctgtccg gaaatcagaa ccatcgtttt
     1141 gatacgggaa tgcagttcta ggaaccgtac gaggaccgaa agcgagctgt ggatatatga
     1201 acttatcgac accgttgacg gtaagatagt tgttttgaac agagactgcg tgcgttgcga
     1261 gagctactgg gtctttaaag tacacagttt cagtaacaaa gacacgatag taatagacag
     1321 tcttgtatgc ctgtggaaga atgatatcta agacaggaac ctctggaggg acattaacag
     1381 tctgatatga attagtaatg ttaggatccc atgcgttaga agcatcagta ggaagccagt
     1441 ctaaacgcac attatttcca gtctggaata aacctctagg atcagagcca gcctcataag
     1501 aacgagtagc accgacagga tccgaatcgt ttattatagt gttctcatta taaactttaa
     1561 gatctgaatg cttagggtag tttttccact catcggggaa tatattctga tgcaagttag
     1621 cgacagacca gagtctagga taacaagtcc ttctagcacc tgattgtaac tggaatttat
     1681 accagcgcct atctaacatt aatgcataat aaccatccat attagctgga ggtactatgt
     1741 cttcaccgtt ggtaatgcgg atgagcccag gattgaattg gtccctaggg tcaactgtat
     1801 tttccccagc tgtgtaacta agaccggttg gatccacggg gagagtacta gccggcacga
     1861 acttaactgt aacgggtccg agcttgaagt atttataagc catgaaaaac ggcataagtc
     1921 ttctgacagc ttcttcacca cctgcagata cagagatatt ttgaacttta tcggcactag
     1981 ttgctaagtc tataaaatag gtatatgttt gtttcataga gaagtcacat ccttagtagt
     2041 agaaccagta cgaccaccta aaccacgtcc gacaatacgc ttagaataat taagaatatc
     2101 atcagaaata cgtccaatgg ttcggtactt ctgggcttcg aatccctgtg tagggtaagc
     2161 ataagttcta cctgtattac ggacataatc tttatgcata ttattgaaat ccttcatcct
     2221 atcgtagtta tagaagaaat caccaacaat aggtaaaccg taagaccatg tccaacgaga
     2281 catcttagta ccacctgcgc ctatagtttg atcttctacg cctgccaccg taagaacgtc
     2341 tacgggaata gtaataacgt ctataataag acatagactc taaataaggg taggagtact
     2401 taaggatt
//