LOCUS NC_043607 6816 bp ss-RNA linear VRL 28-JUN-2019
DEFINITION Tataguine virus strain H9963 RNA-dependent RNA polymerase gene,
complete cds.
ACCESSION NC_043607
VERSION NC_043607.1
DBLINK BioProject: PRJNA485481
KEYWORDS RefSeq.
SOURCE Tataguine virus
ORGANISM Tataguine virus
Viruses; Riboviria; Orthornavirae; Negarnaviricota;
Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae;
Orthobunyavirus; Orthobunyavirus tataguineense.
REFERENCE 1 (bases 1 to 6816)
AUTHORS Shchetinin,A.M., Lvov,D.K., Deriabin,P.G., Botikov,A.G.,
Gitelman,A.K., Kuhn,J.H. and Alkhovsky,S.V.
TITLE Genetic and Phylogenetic Characterization of Tataguine and
Witwatersrand Viruses and Other Orthobunyaviruses of the Anopheles
A, Capim, Guama, Koongol, Mapputta, Tete, and Turlock Serogroups
JOURNAL Viruses 7 (11), 5987-6008 (2015)
PUBMED 26610546
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 6816)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (28-JUN-2019) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 6816)
AUTHORS Alkhovsky,S.V. and Shchetinin,A.M.
TITLE Direct Submission
JOURNAL Submitted (16-FEB-2015) Lab. of Biotechnology, The D.I. Ivanovsky
Institute of Virology, Gamaleya str., 16, Moscow 123098, Russia
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to KP792678.
##Assembly-Data-START##
Assembly Method :: CLC Genomics Workbench v. 7.0
Sequencing Technology :: Illumina
##Assembly-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..6816
/organism="Tataguine virus"
/mol_type="genomic RNA"
/strain="H9963"
/db_xref="taxon:1623310"
/segment="L"
/country="Nigeria"
/collection_date="1971"
/note="Russian State Collection of viruses:399/2"
gene 34..6774
/locus_tag="FLB05_sLgp1"
/db_xref="GeneID:40527258"
CDS 34..6774
/locus_tag="FLB05_sLgp1"
/codon_start=1
/product="RNA-dependent RNA polymerase"
/protein_id="YP_009666936.1"
/db_xref="GeneID:40527258"
/translation="MDPNQKNTFLARINGCRTADLAKDIDIDLLMERHNYFGRQLCQS
LNIEYRDDVPLVDILAEMYPDVNLLWLDIPNITPDNYLIINEDFVYIIDYKVTVSMDT
VRVTMEKYTKALNTVKDQIPQFNFEVVIIQANPVSYQIYVTSDSFRARYPDLNVQLDF
NDFFELKTILYNKFEEDEEFLLKIAHGDFTLTSPWLSEKTPELKDHPIFIEFLDSMPK
EYQESFIESLEYCSYTSERWNTLLYKIKEKTSTDYNAFLKNHANYLFCSEGEYPRPTR
NEILEGWEIMSRRVEETREIMDSEVCQKPSIHFLWAEHDPTQSNDTVKKLIRLSGELQ
SISGANPMKTAFQQLGVCMDFKEEEGVYILHTERLKNEARKSYKPIDYKSIQNRRIGR
SFVRWEQQFVLDTDNIGPLERKRLLKDFAGIGAHKVFKDRTLEDCDLQKPKILDFNKE
SIYIASLSMMNQFKHTLSKQSKVKRKNDLYDFYESSIKDASTLTNETVKKVMNSKYWD
YVSDLSMLIKNMLSMSQYNKHNTFRVAMCANNSLYGILLPAADIKTKRSTIVFFFVAL
HKQEDECLSAGTLFAKFKTPTGYLSVSKAIRLDKERCQRLVISPGLFLLSTILLYNNN
PNLDLNDVLNFCLFTSCSITKSMLSLTEPARYMMMNSLALSSNVKEYISEKFNPYTKT
LFSVYMTRLIKKACLVAQSQRRKITVRDIHLTDYDITQKGVSSERDLEGIWFPGQVSI
KEYINQIYLPFYFNAKGLHEKHHVMIDLVKTVGEIELEQRKTLNKIWSDTPEKQTVNL
PVFLHSLSKMLINDTSRHNHLRDKIESRNNFRRSPTTVSTFTSSKSSVKIGDFTSIKS
KLAKKNKNSIAAAERLYKIANPLLFEEAKANLETKHADYDMLKEAIPDFIDYMTTKNF
DRLFELIDTGVVGNQSVIELSMSLMKTHRHLKFAMFNKGQKTYKDREIFEPQWETKLC
MYPIERIAKERCKLNTDEMISEPGDNKLKILEGKSESEIRFLINNLKEKNKQVAETGE
LYQATKVEINADMSKWSAQDVFYKYFWLIALDPILYPQEKERILFFMCNYMQKELIIP
DEVMCCLLDQKGPRHDDIMMILTEQLTSNHFTVKRNWLQGNFNYISSYVHSVAMSVYK
DIVKSAIARIEGICLINSLVHSDDNQTSITIVQDKLNEDCIVDFCRRTFEVVCLTFGC
QANMKKTYITNFVKEFVSLFNLYGEPYSVYGRFLLTSVGDCAYLGPYEDLANRISAAQ
TAIKHGCPPSYAWVSIYLSHWVTFQTYNMLPGQGNDPTSYLRMERSLIPPELCGILKA
DLSTIALVGLEADNLTFLTNILKKMSPILLKKEPVLNQLEHIEEWDLSKLSDSEIFRL
KLIRYLVLDTEADSTDSMGETSDMRTRSLLTPRKFTTASSLNRLESFRKYQEVMSDNT
KTERLLDFVLERPELLVTKGETSEEFYNMVLFRYNSKKFKESLSIQNPAQLFIEQILF
SNKPVIDYNFIRERFLTLNDSLAAEENQIIVGRMTFKQTFAAIRSDIDTLTISHKDIS
IIYSFMISNDPLMLTVANSLVMSTIGSPQDRKALTSNSMPEFRNLKLIHYSPALVLKA
FTKSTVDLPGVNQDELSRDLHHLKEFVNNTKLLEKYDARLTLQSFNNSLEEKMFRIRE
LTKMYQICYEYIKTSEHKIRIFILPSKCRTSYDFCSIIQGNLISDTKWFTVHYLKQIN
SGGYKGVMQKTTPSDLIISSECFRLLSFFADTFIAEFKRIEFLEYIINYFSYKTIPVS
QLLFVMRNSQNRTDYLPILYHLGLLEQRDLDQYDAMKSSERISWNYRQTSRDFNTGPI
DLTLKGYNREMLILGQDDILKIAELKLKSRTIDSILRAGSKLLNCRHGLRFEKMKQCD
IEEGKLYITYQRKTHHQYTYQIHTFNSIKVRNSETPRLGRVKNDIIPVCEVIVSEYFD
APSISLRQLKYLNTDNIWLSKLKLNDNEVASIRRAPLEKMRLFEGPELTMGLLNITHL
MKTTELLCLDYNKLISTNIISTAKLVDCNGESNDILEEDIMILSDEPLEQSVPESMNT
TPAFNVHITKTGDSHMTYRNAIKILISRETERFKRSFDFTGDGFLSRTNLGVLAVLKF
LINQLKTNEWSSILLSTIHLTMIVNNMDAEFHLLELPSYFFTNPIENKIDWQKLQNYI
RTIPTTSDPLWKEIFENFKVKSQTLIQEKIDISTDFNQITSSIAMPFGRSDFEFTE"
misc_feature 37..588
/locus_tag="FLB05_sLgp1"
/note="Endonuclease domain of segmented negative-strand
RNA virus (sNSV) polymerases; Region:
PDDEXK_RNA_polymerase-like; cd22349"
/db_xref="CDD:411753"
misc_feature order(133..135,187..189,268..270,310..312,316..318,
358..360)
/locus_tag="FLB05_sLgp1"
/note="active site"
/db_xref="CDD:411753"
misc_feature 1825..4035
/locus_tag="FLB05_sLgp1"
/note="Bunyavirus RNA dependent RNA polymerase; Region:
Bunya_RdRp; pfam04196"
/db_xref="CDD:282102"
ORIGIN
1 caaatcaaaa aaatactttg ctagtgttgc aaaatggatc caaatcaaaa aaatactttc
61 ttagccagaa taaatggctg cagaacagct gatttggcta aggacataga catagatctt
121 ttgatggaga gacacaacta ttttgggcgt caactctgcc agtctttaaa tattgagtat
181 agagatgatg tgccgttagt agatatatta gcagaaatgt acccagatgt aaatcttctt
241 tggctggaca taccaaacat tacacctgac aattatctga taatcaatga agactttgtt
301 tatatcatag actacaaagt gacagtcagc atggatacag ttagagtaac tatggagaaa
361 tacaccaaag cactcaatac agttaaagac caaattccgc agttcaattt cgaggtagtt
421 attattcagg caaatcccgt gtcatatcaa atatatgtaa caagtgattc atttcgagct
481 aggtaccctg acctaaatgt acaacttgat tttaatgatt tcttcgaact taaaaccata
541 ctatataaca aatttgaaga agatgaagaa ttcttattaa agattgctca tggagatttc
601 acattaacat ctccatggtt gagtgaaaag accccagaat taaaggacca tccaatattc
661 atagaatttt tagactcaat gcctaaggag taccaagagt cttttataga aagtttagaa
721 tactgctctt atacatctga aagatggaat actttactgt ataaaattaa agaaaagaca
781 tctacagact ataatgcatt cttaaaaaac catgctaatt atttattttg ttcagaagga
841 gaatatccca gacctacacg caatgagata ttagaaggtt gggaaataat gtcaagaaga
901 gtagaagaga ctagagagat aatggattca gaagtctgcc agaaacctag tatacacttc
961 ttatgggcag aacatgaccc aacacaaagc aatgatactg ttaagaaatt gatcagactg
1021 agtggtgagc tacaatccat atctggtgct aaccccatga aaaccgcatt tcaacagcta
1081 ggtgtatgca tggactttaa agaagaagaa ggtgtctata ttttacacac agaaaggcta
1141 aaaaacgagg ctaggaaaag ctataaaccg atagactata agagtataca aaataggaga
1201 atagggcgtt ctttcgtgcg atgggagcaa cagtttgttc tagacacaga caatatcgga
1261 cctttggaaa gaaagagatt gctcaaagat tttgctggca tcggtgctca taaggttttt
1321 aaagatagaa ctttagaaga ttgcgatctt caaaaaccta agattctaga cttcaacaaa
1381 gaatctattt atattgcatc attaagcatg atgaatcaat ttaaacatac tttaagtaaa
1441 caatcaaaag taaagaggaa aaatgatcta tatgatttct atgaaagtag catcaaagat
1501 gcaagtactt taaccaacga gaccgtaaaa aaggttatga atagtaagta ctgggattat
1561 gtctcagatt tgagtatgct aatcaaaaac atgctttcaa tgtcacaata taacaaacat
1621 aatactttta gagttgcaat gtgtgccaat aatagtttgt atgggatatt attacctgcc
1681 gcagacatta aaacaaagag gtctacaata gttttctttt ttgtagcact gcataaacaa
1741 gaagatgaat gcctttccgc tggcacgtta tttgcaaaat ttaaaacccc cactggttat
1801 ttgtctgtgt ctaaggccat aagactagat aaggaaagat gccaacgatt agttatatct
1861 cctggacttt ttttgctttc tacaatcttg ttatataata ataaccctaa tttggatcta
1921 aatgatgtgc taaatttttg tctgtttact agctgctcta taacaaaatc tatgctatct
1981 ttaacagaac cagctaggta tatgatgatg aatagtttag cattgagtag caatgttaaa
2041 gaatatattt ctgaaaaatt taatccatac actaaaacat tatttagtgt ctacatgact
2101 agactaatta agaaggcatg tttggtggcc cagagtcaac gtaggaaaat aacagtaaga
2161 gacattcatt taacagatta tgatattacg caaaaaggcg taagctcaga aagggatctt
2221 gaaggcatat ggtttccagg acaagtttcc ataaaagaat atatcaatca aatatatctg
2281 cccttttatt ttaatgccaa gggtttacat gaaaaacatc atgttatgat tgatcttgtg
2341 aagactgttg gtgaaataga gttagaacaa aggaaaacat tgaacaagat atggtcagac
2401 acacctgaga agcagacggt aaatctgccg gtttttttac attcactttc taaaatgcta
2461 attaatgata catcaaggca taatcattta agagacaaga tagagtccag aaataacttt
2521 agacgatcac caaccacagt ttcaactttt acgtctagta agtctagtgt caaaattggt
2581 gactttacta gtatcaaaag taagcttgca aagaaaaata aaaattctat tgcggcagca
2641 gaaaggctat acaaaattgc taatccttta ttatttgaag aggccaaagc taatttagaa
2701 actaaacatg cagattacga tatgttaaaa gaggctatac ctgattttat agattatatg
2761 actacaaaaa actttgacag actgtttgaa ttaatagata caggtgtggt tggaaatcaa
2821 agtgtgatag aattatccat gagtttaatg aagacacaca gacaccttaa atttgctatg
2881 tttaataaag gacaaaagac ctataaagat agagagatct ttgaacccca atgggaaaca
2941 aaattatgta tgtacccgat agaaagaatt gcaaaagaaa gatgcaagtt aaatacagac
3001 gaaatgatat cagagccagg tgacaacaaa ctaaagatat tggaagggaa atctgagtct
3061 gagatcagat tcttaataaa caatttgaaa gagaaaaaca aacaagttgc agaaacagga
3121 gagctttacc aagctactaa agtagaaata aatgctgata tgtctaaatg gagtgctcaa
3181 gatgtatttt ataaatattt ttggttaata gcactagatc ctattttata tccacaagaa
3241 aaggagagga tactattttt tatgtgtaat tatatgcaga aggaattgat aataccagat
3301 gaagttatgt gttgcttatt agatcaaaaa gggcctagac atgatgatat aatgatgatc
3361 ctcacagaac agttaacctc taatcacttt actgtgaaga gaaactggct acaaggcaat
3421 ttcaattaca tttctagtta tgtgcatagt gttgccatga gtgtgtacaa agatattgtt
3481 aaatcagcta tagcaagaat tgaaggaata tgtttaatca attcattagt tcattctgat
3541 gataaccaaa catcgatcac aattgtacaa gataagctga atgaggattg catagtggat
3601 ttttgtagaa gaacctttga agtagtttgt ctaacattcg gctgtcaggc taatatgaag
3661 aaaacttaca tcacaaattt tgtcaaagaa tttgtatctc ttttcaattt atatggagaa
3721 ccatattccg tgtatggaag gttcctttta acctctgtag gagattgtgc atatttaggc
3781 ccatatgaag atttagcaaa tagaatttca gcagctcaaa ctgccataaa acatggttgt
3841 ccaccaagtt atgcatgggt ttcaatatat ctgtctcact gggtcacctt ccaaacatat
3901 aatatgctac cagggcaagg caatgatcct acgtcttatt taagaatgga acgtagtctg
3961 atccctccgg agctatgtgg catcttgaaa gctgatctct ccacaatagc attagttggc
4021 ttagaagctg ataaccttac ttttttaacg aatatcctaa agaaaatgtc tcctatccta
4081 ctaaagaaag aacctgtctt aaaccaatta gagcatattg aggaatggga cttgagtaaa
4141 ttaagtgatt ctgaaatttt ccgcttaaag ctaatcagat acttagtttt agacaccgag
4201 gcagactcaa ctgattctat gggtgaaaca tcagatatga gaactagatc cttattgacg
4261 ccaagaaaat ttactactgc cagctctctg aaccgattag aatcatttag aaaataccaa
4321 gaagtaatgt ctgataatac caaaacagaa aggttgctag attttgtact agaaagacct
4381 gagttattgg ttaccaaagg cgaaaccagt gaagaattct acaacatggt attatttagg
4441 tacaattcaa agaagttcaa agaatcattg tcaatccaaa atcctgctca attgttcata
4501 gagcagatat tgttttcaaa taaaccagtt atagattaca attttatcag agaaagattc
4561 ttgacactga atgattctct agctgcagag gagaaccaga taattgtagg tagaatgact
4621 tttaaacaaa catttgcagc aataaggtct gatatagata cactaacaat tagccataaa
4681 gatattagta taatatacag cttcatgata tcaaatgatc cactgatgtt gacagtggca
4741 aatagcctag ttatgtctac tataggatcc ccgcaagaca gaaaggcctt gacctctaat
4801 agtatgccgg aattcagaaa tttgaaacta atacactatt ctcctgcctt agtattaaag
4861 gcctttacaa agagtactgt tgatttgcca ggagtgaacc aggatgaact ctctagagat
4921 cttcatcatt taaaagaatt tgttaacaac acaaaattac tagaaaaata tgatgcaaga
4981 ttaacattac aaagcttcaa taatagtctt gaagagaaaa tgttccgaat aagagaattg
5041 actaaaatgt atcagatatg ctatgaatat atcaaaacat cagaacataa aatcagaatc
5101 tttatactgc cttctaaatg tagaacttct tacgacttct gcagtataat acaaggcaat
5161 ctaatatctg acaccaagtg gtttactgta cactatctca agcaaataaa ttcaggaggc
5221 tataaaggtg ttatgcaaaa aacgacacca agtgacttga ttataagttc agaatgtttt
5281 aggctcttgt cattttttgc tgataccttt atagccgaat ttaaaagaat tgagtttttg
5341 gaatacataa tcaattactt ctcatataaa acaattcctg tctctcagct cttatttgta
5401 atgcgaaata gtcaaaatag gacagattac ctaccgatac tgtatcattt aggactctta
5461 gaacaaaggg atttagatca atatgatgct atgaagagct cagagagaat tagttggaat
5521 tacaggcaaa caagcagaga tttcaacact ggaccaatag atttaacctt aaaaggttat
5581 aatagggaaa tgctaatact aggtcaagac gatattttaa agattgcaga attaaaactg
5641 aaatcaagaa ccattgattc gatactaaga gcaggatcaa agctattaaa ttgtaggcat
5701 gggctgcgtt ttgaaaaaat gaaacaatgt gacatagaag aagggaaatt atatatcaca
5761 tatcaaagaa agacacatca tcaatatact tatcaaatac atacattcaa ttctataaag
5821 gtaagaaaca gtgaaacacc cagactagga agagtaaaaa atgatatcat tcctgtgtgt
5881 gaagtgatag tatcagaata ttttgatgca ccttcaatat ctttgcgaca actcaaatat
5941 ttgaatactg acaatatttg gttatctaaa ttaaaactaa atgacaatga ggtggcaagc
6001 ataaggagag cgcctttaga aaaaatgcgg ctttttgaag gtccagaatt gaccatggga
6061 ctacttaata ttactcactt aatgaaaact actgagttac tttgtttaga ttataacaag
6121 cttatctcta caaatataat ttctacggca aaattagtgg attgcaacgg agaatcaaat
6181 gatatattag aggaagacat aatgatactg tcagatgaac ccttagagca atcagttcca
6241 gaatccatga ataccacgcc agctttcaat gtgcatataa ctaaaactgg tgatagtcat
6301 atgacttata gaaatgctat caaaatatta atatctagag aaacagaaag atttaagaga
6361 agctttgatt tcacaggaga tggtttcttg agtagaacta atcttggagt attggctgta
6421 ttaaagttcc taattaacca actgaaaact aatgaatggt cgagtatctt gctatctacc
6481 atacacttaa caatgatagt aaataatatg gatgcagaat tccatttatt agaattgcca
6541 tcttacttct ttaccaatcc tattgaaaat aaaatagact ggcagaaatt gcaaaattat
6601 ataagaacta taccaacaac atcagacccg ttatggaaag agatttttga gaattttaaa
6661 gtaaaaagtc aaacattaat acaagagaaa atagacatca gcactgattt taatcaaatt
6721 accagcagta ttgccatgcc ttttggtagg tcagattttg aattcacaga ataattagtg
6781 cctaaccgct aaagcagagt gaacaataac atagca
//
