LOCUS       NC_055362               1795 bp    RNA     linear   VRL 10-JUN-2021
DEFINITION  Salanga virus strain AnB 904a nonstructural protein and
            nucleocapsid genes, complete cds.
ACCESSION   NC_055362
VERSION     NC_055362.1
DBLINK      BioProject: PRJNA485481
KEYWORDS    RefSeq.
SOURCE      Salanga virus
  ORGANISM  Salanga virus
            Viruses; Riboviria; Orthornavirae; Negarnaviricota;
            Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae;
            Phlebovirus; Phlebovirus salangaense.
REFERENCE   1  (bases 1 to 1795)
  AUTHORS   Zhao,G., Krishnamurthy,S., Cai,Z., Popov,V.L., Travassos da
            Rosa,A.P., Guzman,H., Cao,S., Virgin,H.W., Tesh,R.B. and Wang,D.
  TITLE     Identification of Novel Viruses Using VirusHunter -- an Automated
            Data Analysis Pipeline
  JOURNAL   PLoS ONE 8 (10), E78470 (2013)
   PUBMED   24167629
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1795)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUN-2021) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1795)
  AUTHORS   Zhao,G., Krishnamurthy,S., Cai,Z., Popov,V.L., Travassos da
            Rosa,A., Guzman,H., Cao,S., Virgin,H.W., Tesh,R.B. and Wang,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-FEB-2013) Pathology and Immunology, Washington
            University in St. Louis, 660 South Euclid Ave., St. Louis, MO
            63110, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to KC669551.
            
            ##Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.6
            Sequencing Technology :: 454; Sanger dideoxy sequencing
            ##Assembly-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1795
                     /organism="Salanga virus"
                     /mol_type="genomic RNA"
                     /strain="AnB 904a"
                     /host="Aethomys medicatus"
                     /db_xref="taxon:1416745"
                     /segment="3"
                     /country="Central African Republic"
                     /collection_date="01-Sep-1971"
     gene            44..853
                     /locus_tag="KM584_s3gp1"
                     /db_xref="GeneID:65246788"
     CDS             44..853
                     /locus_tag="KM584_s3gp1"
                     /note="NSs"
                     /codon_start=1
                     /product="nonstructural protein"
                     /protein_id="YP_010086146.1"
                     /db_xref="GeneID:65246788"
                     /translation="MDRYLHNRAIVHRLHGSSNLPVVTFKVIEDDIDEHVAVHQCVEV
                     VLHSHRLSRAEGHSLKWFLERGLFPARSGDLIWSSCITRIEPQDLNSYLYGFAALPRE
                     DFNCLQLRNVRKALEWPTGQLSFEFFDLEFPGKYVWAFENMRRTIQLLSMMSSSDQVE
                     DIICDAYDCVLRAGSDLGLAHSTFPGNNIVYEVCYIQLLKAVQAYSTDIQQVSGFPDN
                     AVTIFLKDIMPYVRDRFPGVREPMSNPLPEPSEHQLNVWALPDEGIEEDID"
     misc_feature    53..775
                     /locus_tag="KM584_s3gp1"
                     /note="Rift valley fever virus non structural protein
                     (NSs) like; Region: NSs; pfam11073"
                     /db_xref="CDD:431640"
     gene            complement(1019..1756)
                     /locus_tag="KM584_s3gp2"
                     /db_xref="GeneID:65246787"
     CDS             complement(1019..1756)
                     /locus_tag="KM584_s3gp2"
                     /note="N"
                     /codon_start=1
                     /product="nucleocapsid"
                     /protein_id="YP_010086147.1"
                     /db_xref="GeneID:65246787"
                     /translation="MDYAKIALDFAGEGISQVEIAKWVEDFAYQGFDAKRVVELVQTR
                     GSGRNWKQDVAKMIVIALTRGNKIAKMKQKMSDKGKESLTELERVYMLKSGNPGRDDL
                     TLSRIAVAFAPWTVGALNHLDGHLPVNGKDMDEHVQRYPRCMMHPAFGSLIDRNLPEV
                     TVSQLINAHCIFLDKFARVINPNLRGKTKQEVAKSYEQPLKAAVSSTFFSLEQKRGVL
                     KNLGLIDENLKVTEVVKRASDFWTQAF"
     misc_feature    complement(1088..1753)
                     /locus_tag="KM584_s3gp2"
                     /note="Tenuivirus/Phlebovirus nucleocapsid protein;
                     Region: Tenui_N; pfam05733"
                     /db_xref="CDD:368585"
ORIGIN      
        1 cacaaagacc cccgtaccag tttcaaaaac tgaaaaggca aaaatggatc gatacttgca
       61 taaccgtgct attgttcatc ggttgcatgg ttcctcaaac ttacctgtgg tgaccttcaa
      121 agttatagaa gacgatatcg atgagcatgt cgctgttcac cagtgtgtcg aggttgtgct
      181 acattcacac aggctttctc gcgcagaagg tcacagtttg aaatggtttt tagaaagagg
      241 tctcttccca gcaaggtctg gagacctgat ctggtctagc tgcataacta ggattgaacc
      301 acaagacctg aattcttatc tatatggctt tgctgctcta ccaagagagg actttaattg
      361 tctccagcta aggaatgtga ggaaagcatt agaatggcct actggacagc tttcatttga
      421 attctttgac ttagaattcc ctggtaaata tgtctgggcc ttcgagaaca tgagaaggac
      481 tatccagctc ttatccatga tgagctcctc tgatcaggtt gaagatatta tctgtgatgc
      541 gtatgactgt gttttgaggg caggcagtga cctaggacta gcccactcca catttccagg
      601 aaacaacatt gtgtatgagg tgtgctatat ccagctcctc aaggcagtac aggcatattc
      661 aacagacatt caacaagtat ctggctttcc tgataatgca gttaccatct tcctcaaaga
      721 cattatgcca tatgtgagag ataggttccc tggtgtccga gaaccaatga gcaacccttt
      781 gccagagcct tctgagcatc aattaaatgt ttgggcactt ccagatgagg gtatagagga
      841 ggacattgat tagctgccca accccctacc atttcccacc tccccctgaa ttaagaccag
      901 aatttaaaac ttacagtcaa ttggattccc caagctaaac ttcccaaccc ctagatccca
      961 agtcccacac cccaacctct attccctttc tcctatcccc cctggcagca actccctatt
     1021 agaaggcctg agtccaaaag tcagaggctc tctttacaac ctctgtcacc ttcaggtttt
     1081 catcaattaa tcccaggttc ttcagaactc ccctcttctg ttctaaagaa aagaaggtgc
     1141 ttgagactgc agccttcagg ggttgttcat aagacttggc aacttcctgc tttgtcttcc
     1201 ctctgaggtt aggattgatc actctggcaa acttgtccaa gaagatgcag tgagcattga
     1261 tgagctggga cacagtcacc tcaggcaggt tccgatcaat tagagatccg aaagctggat
     1321 gcatcatgca tctggggtaa cgctgaacat gctcatccat gtccttgcca tttaccggaa
     1381 gatgtccatc aagatggttt agtgcaccaa ctgtccacgg agcaaaagcc acagcaattc
     1441 tggacaatgt caagtcatct cgaccaggat taccgctctt gagcatatag actctttcta
     1501 gctcagtcag tgattctttt cccttgtcag acatcttctg cttcatcttt gcaatcttgt
     1561 tgcctcgagt aagtgcaatc acaatcatct tggccacgtc ctgcttccaa ttcctaccag
     1621 atcctctggt ctgaactagc tcaacaactc tcttggcgtc aaagccttga taagcaaagt
     1681 cttccaccca tttggcaatc tcaacctgag atataccttc accggcaaaa tcaagcgcta
     1741 tcttggcgta atccattttt tacctttatg tttatttaat aaacggggtt ctttg
//