LOCUS NC_078604 6505 bp RNA linear VRL 07-MAY-2023
DEFINITION Penicillium roseopurpureum negative ssRNA virus 1 isolate MUT2146
RNA-dependent RNA polymerase (QK737_gp1) gene, complete cds.
ACCESSION NC_078604
VERSION NC_078604.1
DBLINK BioProject: PRJNA485481
KEYWORDS RefSeq.
SOURCE Penicillium roseopurpureum negative ssRNA virus 1
ORGANISM Penicillium roseopurpureum negative ssRNA virus 1
Viruses; Riboviria; Orthornavirae; Negarnaviricota;
Polyploviricotina; Ellioviricetes; Bunyavirales; Discoviridae;
Orthodiscovirus; Orthodiscovirus penicillii.
REFERENCE 1 (bases 1 to 6505)
AUTHORS Nerva,L., Forgia,M., Ciuffo,M., Chitarra,W., Chiapello,M.,
Vallino,M., Varese,G.C. and Turina,M.
TITLE The mycovirome of a fungal collection from the sea cucumber
Holothuria polii
JOURNAL Virus Res. 273, 197737 (2019)
PUBMED 31479695
REFERENCE 2 (bases 1 to 6505)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (05-MAY-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 6505)
AUTHORS Nerva,L., Forgia,M., Ciuffo,M., Varese,G.C., Gnavi,G. and Turina,M.
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2018) Istituto per la Protezione Sostenibile
Delle Piante, CNR Torino, Italy, Strada delle Cacce 73, Torino, TO
10135, Italy
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to MG887749.
##Assembly-Data-START##
Assembly Method :: Trinity v. 2.3.2
Sequencing Technology :: Illumina
##Assembly-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..6505
/organism="Penicillium roseopurpureum negative ssRNA virus
1"
/mol_type="genomic RNA"
/isolate="MUT2146"
/host="Penicillium roseopurpureum"
/db_xref="taxon:2485920"
/country="Italy"
/collection_date="Jan-2017"
gene complement(52..6462)
/locus_tag="QK737_s3gp1"
/db_xref="GeneID:80557471"
CDS complement(52..6462)
/locus_tag="QK737_s3gp1"
/note="RdRP"
/codon_start=1
/product="RNA-dependent RNA polymerase"
/protein_id="YP_010840311.1"
/db_xref="GeneID:80557471"
/translation="MSNVVVGIQSVSRTLSTRLAAPNDLDAFARGLTDSYLPKNQNDY
ATYRRYMHDILCLALIEVGVYHDEELTLGKLGISVNDKRLNMQKPDLYTKELTNIEVG
EVTLSYNSGFDSDKKRVTYKDFLKLVSDKLGIQVNFNVIAVDLSDPEWEDSLPTLPSI
HGKMLRSFIKNLSYIHAHRDYSSHRKDHSEFYALDKFRFELSEDIGEIMSVATRSKIT
TEEVVQRLEFSGHESLSDEEYLSLLAKGILSGPLFKRPTPHPEPQLNTELDDSWAKFC
QAKKNTEKLPRILQLGAPLEMIEVSYSFDDVVKSLRSTNRTGGYLDMIKAFLSKKDPD
ENHIVHLSLSDSQLEKEQMEGPGRKAFLRRKGLKIERKPPTHIGISKEHEVILDDLIQ
QVEELTVSCNLKDLAQPQLSSVGPSMANVLNQIVESHHASPFSGVAKFYQRAAQEIVI
NSMRRRKNRQYVLCSSGFKDIFLLIAPGPQLRTESNTEFVKIISFCRPVHHVLSAPWL
PTGDHWESEWLSVDTDRLKHWSRSFDRTFLGSVACAERLVELDKTIVKACRDEIKHGN
YQLMILTYLEDKQLTSLTNQTLRYLWMKSLGDKQFSGIMSKFPSRVGSVIQSVMLQRA
IKTTMNVNRSNLSDYIRVPASRQDDQTGNYDETTTGIVGKLPRLFTKGDMVPLSYNLN
EIYWCMMYNKDRQNPAQDALSILNKVLKEEKKYEEEIDSRKTEEEKKNYTFGNSTLEQ
DLKHIHSKDPESHFYSRKAVQIGVRLQTIHEDNVAADYSWLTPAKLNAILSKNLSEYA
TFKASVKDLCRRVDVNDLKDIENVGKRTKAVELVAELVSNENLTQAFEVAMQFSGDNN
KAFDVMIQIFKKGQIGGVREIMILYIKARVLFNIVEELCRLLSKSDKREILTKGKDKR
LMMRGDYEEVMSQFPKGTPVQMIKNSYDMTTWAQKFIPTIFCTIYPEMLSEYPDLKRL
AYFVFLKHTNKMIEYPRKLVEMWSRHKNEKHSEPWLQSAKEKFLNDGVPYFINHSNMC
QGIPHYNSTVLALSCQSLRDALFHECLSQLDQDCLIRWKTRVGSDDKGDMIGVDMSNK
FAYRQYLLFEQCAHAAERLHSMELSVKSAAGNILYELNSAFMANLETLSPTIKFALAS
CDMIQTSSCATFVNESYGRVRQLRENGGSSVLCGLAHMVNSDHFYTMFRTGMRMTNDV
TEIFRVPKEMIPYDFGVYPFFDIDLQDIVGPEYYNYTVVTNPEVPLEIKQLLYTPLSR
DDISEAFPSNEEEMLLKKDHFGIKQGLIKQLVSMRRRLSIVPDEVDKFFSDNPFLMVR
GPETREETLKAIHSKLLTKGAAEALRRTSPAIYLGRLSAFESAKAWKIRRPNGTEIID
IDEGIAMELEDDVPATYQEFMSWGLLKAKQQNFPVGHMMNVIFPQATSYEVIKQFVGK
FGLKRESAKKYSQAVRTWVVNNYNYNFNNSLKSILETSFGLSQLSSKEDVNEFRKLLN
FNLDSYDGFITECKEKNLRPLDIFFYMTKIYKATRSSKVQAFANGPSTNSLNTTLISI
KRYSHLPHTEMVMDIGLDPDDFLETNRQDVKIETLKFCCNLLLMECQGTVSGGLHVLD
GCTINGTSLSEWCQTTIRTIRSISGFDFQTKKVLVFVASQVLQKDEFKEKLMIWNNLN
YTYLKRQKKVISGNGHVSWEGDLKMLVNSGKNTFVLNIVNDVHFLTCKRIDDETTLLQ
ALGEICRMLGVDVRAFFTKKPLRQGMLYLSENSKSLLMSSSRGPEHNCLNLMHQRKFE
HMQLQDFDNFIITTSVDKKTFAVSVCLQEGDERSATLCHFPGNFYPASSPKGLMVYEG
FWFKGLRLKTILRNQDWFYNYRLPSFTDSDTLEFFHNDVNFDMVLSQTTEEKGRILEY
LQVMDEIDEEVFNLNTGGLVMQGNYVVSDLDFEEEVENVEDLFMEAMTGIKREGAFDF
EPIEPGSFDWAEEAEEASKDTGLPPIEEEDGIRFVRSMGYKRRARKANMHVINQMQLG
HILKERVLNMFFKNAAITSEDRKLLPNYYIWINNNRSSVGENLSGELQRVILTELHIN
MGATIQELKTTLDRANPSLSSAPPKLMNYTQGQVTDLYTQLSQNVGYSPVLYEESEGS
ENEY"
ORIGIN
1 ccccctaaca ctgaataacg caaatctacc aacataacac taagctctag atcaatattc
61 gttctctgag ccttcgcttt cctcatacaa gacaggtgag tagccaacat tttgtgaaag
121 ctgagtgtac agatctgtga cttggccctg tgtgtaattc ataagtttgg gaggtgcaga
181 ggacaagctt ggattagctc tatcaagcgt agttttcagc tcttgaatag tagcacccat
241 attaatgtgt agttcggtca aaattacacg ctgcaattcc ccagataggt tttctcctac
301 gctagatcta ttgttattta tccatatata atagtttggc aggagtttcc tgtcttccga
361 agtgatggct gcatttttga aaaacatgtt taacacccgt tcttttagga tatgacccaa
421 ttgcatttga ttgatcacat gcatgtttgc tttccgggct cttcttttat aacccattga
481 ccttacaaat ctaatgccat cttcttcttc aattggaggc aggcctgtgt ctttgcttgc
541 ttcttcggct tcttcagccc agtcaaaact gccaggctct ataggctcaa agtcgaaggc
601 accttctctt tttatgcctg tcattgcttc catgaacaaa tcctcaacat tctcaacttc
661 ttcctcaaaa tcaagatcac tgacaacgta gttaccctgc atcacaaggc cacctgtgtt
721 taaattaaaa acttcctcat ctatttcatc catcacctgg aggtactcca agattcggcc
781 tttttcttca gttgtctggg aaagcaccat gtcaaagttg acatcattat ggaaaaattc
841 cagagtgtca ctgtctgtga aggaaggcag tctataattg tagaaccagt cttgattcct
901 tagtattgtc tttagtcgca agcctttaaa ccagaacccc tcataaacca tcaggccttt
961 gggtgaactg gccgggtaga agttacccgg gaaatgacac aaggtggcac ttctttcatc
1021 gccttcttgt aagcacactg acactgcaaa agtcttttta tccacagaag tggttatgat
1081 gaagttgtca aagtcctgca actgcatatg ctcaaatttc ctctgatgca tcaaatttaa
1141 acaattgtgt tcaggacccc gacttgacga catgagtaaa gacttggagt tctctgatag
1201 atatagcatt ccttgcctga gaggcttctt agtaaaaaag gctctcacat caactcccag
1261 catcctgcat atttctccta gggcttgtag caaagtagtc tcgtcatcaa ttcgcttaca
1321 agttaagaaa tgtacatcat tcacaatgtt cagcacaaaa gtgtttttcc ctgaattcac
1381 aagcattttt aaatcaccct cccaagatac atggccgtta cctgagatca ccttcttttg
1441 tctcttcaag tacgtgtaat tgaggttgtt ccagatcata agcttttctt tgaactcatc
1501 tttctgtaac acttgagaag caacaaaaac taggactttc ttcgtttgaa agtcaaagcc
1561 agagatggac cgaatggttc gaatggtggt ttgacaccat tcagagagag atgttccatt
1621 tatagtgcat ccatccaaaa catgcaaccc accactgaca gtcccttggc attccattag
1681 caacagattg caacagaact tcaaagtctc aatcttcaca tcctgccggt ttgtctcaag
1741 gaaatcatct gggtctaacc ctatgtccat aaccatttct gtatgaggaa gatgactata
1801 tcttttaatg gaaattaagg tggtgttcag agagtttgtt gatggcccat ttgcaaaggc
1861 ttgcaccttt gaactcctag ttgccttata aatctttgtc atgtaaaaga atatgtctaa
1921 cggccttaga tttttctctt tgcattctgt tatgaatcca tcatagctgt ctaagttaaa
1981 attgagcagt ttcctgaatt cattaacatc ttccttgcta gagagctgtg acagcccaaa
2041 ggatgtttca aggatacttt tcaaagaatt gttgaagttg taattgtagt tattcacaac
2101 ccaagttcta acagcctggg aatatttctt cgctgactca cgctttagtc caaacttacc
2161 cacaaattgc ttaatgactt cataagaggt agcttgaggg aaaatcacgt tcatcatgtg
2221 gccaaccggg aaattttgtt gcttggcttt caacaatccc catgacataa attcctgata
2281 agtggcgggc acatcatctt ccaattccat agcaatgcct tcatctatat caatgatctc
2341 agttccattt ggtcgcctta ttttccaagc ctttgcactt tcaaaagctg agagtcttcc
2401 aagataaatc gcaggtgatg ttctcctaag agcttctgca gctcctttag ttaacaactt
2461 agagtgtata gcctttagtg tttcttccct tgtctctgga ccacgcacca ttaggaatgg
2521 gttatctgag aagaatttat ccacttcgtc aggaacaatt gataaccttc tgcgcataga
2581 aactaattgc tttattaacc cctgttttat cccaaaatga tcttttttta gaagcatctc
2641 ttcttcattg ctagggaaag cttcacttat gtcatctcta gacagaggtg tatacaacaa
2701 ctgctttatt tctagtggga cttctgggtt ggtaaccact gtgtagttgt aatattctgg
2761 accaactatg tcctgcagat caatgtcaaa gaaagggtac acaccaaagt catagggaat
2821 catttccttg ggtaccctga agatctcagt gacatcattt gtcattctca tccccgttcg
2881 aaacattgtg tagaagtgat ctgagttaac catatgagct agcccgcata aaacagaaga
2941 gccaccattt tctctcaatt gtctaactct cccgtaggac tcattaacaa aggtggcaca
3001 tgaagaggtt tgaatcatgt cacaagaggc taatgcaaac ttgatggttg gtgacaaagt
3061 ctctagattt gccataaatg ctgaattaag ttcgtacaat atgtttccag ctgctgattt
3121 aactgagagt tccatagaat gcagcctttc tgctgcatgg gcacattgtt caaacagcag
3181 atactgcctg taagcaaatt tgttgctcat atcaacgcca atcatgtcac ccttgtcatc
3241 tgacccaacc ctagttttcc acctgatcaa acaatcctga tccaattgag atagacactc
3301 atgaaataat gcgtcacgca agctctgaca agataaggcc agcactgtgg agttatagtg
3361 agggatgcct tgacacatgt tagagtgatt tataaagtaa ggcacaccat cattcaagaa
3421 tttttccttt gcagattgca accagggttc cgaatgcttc tcattcttat gccttgacca
3481 catctctaca agctttcttg gatactctat catcttattt gtgtgcttaa gaaacacgaa
3541 gtaagccaat cttttgagat caggatactc tgagagcatt tcaggataga ttgtgcaaaa
3601 aatggtcggt atgaacttct gagcccaggt ggtcatgtcg taagagtttt ttatcatttg
3661 cactggagtt cccttgggga actgtgacat gacctcttcg taatcacctc tcatcatcaa
3721 cctcttatct ttgccttttg taaggatttc ccttttgtct gatttggata ggagcctaca
3781 cagttcttca acaatgttaa agaggaccct tgctttaata tacaagatca tgatctctcg
3841 aactcctcct atttggccct ttttgaaaat ttgtatcatg acatcaaacg ctttattatt
3901 atccccagaa aactgcatgg caacttcaaa agcttgagtc aaattctcat tagaaacaag
3961 ctctgccacc aactctacag cctttgtccg cttgccaaca ttctctatat cttttaggtc
4021 atttacatca actcgtctgc acaagtcctt tacagaagct ttgaatgttg catattcaga
4081 gaggttcttg ctcaaaatgg cattgagctt agctggggtt aaccagctat aatctgcagc
4141 tacattatct tcatggatgg tctgcaatct aacacctatt tgaacagctt tccgactata
4201 aaagtggctt tctggatctt tggagtgtat atgcttcaga tcttgttcta gtgtgctatt
4261 cccgaaagtg tagttcttct tttcttcttc tgtctttcga ctgtctatct cttcttcata
4321 ctttttctct tctttcaaaa ctttgtttaa aatgctcaag gcatcttgtg cagggttttg
4381 cctatctttg ttatacatca tgcaccaata gatctcatta aggttataag aaagtggtac
4441 catgtcacct tttgtgaaaa gacgtggaag cttccccaca atccctgtag ttgtttcatc
4501 gtaattgcct gtttgatcat cctgcctaga agctgggact ctaatgtaat cagatagatt
4561 gcttctattg acattcatgg ttgttttaat tgccctctga agcatcactg attgtatcac
4621 tgagccaaca cgtgaaggaa acttactcat tatgccagag aattgcttgt cacctaggga
4681 cttcatccaa aggtaacgaa gtgtttgatt agtcaaagag gttagttgct tgtcctcaag
4741 gtaagttaaa atcatgagct ggtaattgcc atgtttaatt tcatcccgac atgctttcac
4801 aatagtcttg tctaactcaa ccaagcgctc tgcacaagcc acagacccta agaaagttct
4861 atcaaaactc cttgaccaat gtttcaatct atctgtatcc actgacaacc attctgattc
4921 ccagtgatct ccagtgggca gccatggtgc tgacaagaca tgatgtacag gccggcaaaa
4981 tgaaatgatc ttgacaaact ctgtgttaga ttcagtcctg agttgaggcc caggggctat
5041 aagtaggaaa atgtccttga atccactaga gcataagacg tattgcctat tcttccttct
5101 tctcatacta ttgattacaa tttcctgagc ggctctttgg taaaacttgg cgacgccaga
5161 gaacggacta gcatggtgag attcaacaat ctgattaaga acgtttgcca ttgaaggccc
5221 aactgaactc agttgcggtt gtgccagatc ttttaaattg cacgagactg ttagctcttc
5281 tacctgttgt attaaatcat ctagaatcac ttcatgttct tttgatatgc ctatgtgggt
5341 tggaggtttc ctttcaatct tcaacccctt cctacgtaag aaggctttgc ggcctggacc
5401 ttccatttgc tctttctcca gttgcgaatc agatagtgag aggtggacaa tatgattttc
5461 atcagggtct ttttttgaca aaaaggcctt aatcatatct aggtaccctc ctgttcggtt
5521 tgtggatctg agagatttca ccacgtcatc aaagctgtag gacacctcta tcatttccag
5581 cggagctccc agttgtaaaa ttcttggcaa tttctctgtg ttcttctttg cttgacaaaa
5641 ttttgcccaa ctatcatcaa gctcagtgtt gagctgcggt tctggatgtg gggttggcct
5701 tttaaacaaa ggacctgaca aaataccttt tgctaaaaga gagagatact cttcgtcaga
5761 tagagactca tggccggaga attctaatct ctgtacaacc tcctcagttg ttattttgct
5821 cctggttgca accgacatga tttcaccaat atcctctgac agctcgaacc taaacttgtc
5881 taaggcatag aattctgagt ggtctttccg gtgactagag taatctcgat gagcatgaat
5941 gtaacttagg ttctttataa atgacctaag cattttgcca tggatagaag ggagtgtagg
6001 caagctatcc tcccattcag ggtcagaaag gtcaactgca atgacattga aattgacttg
6061 aattcccagt ttgtcagaga ccaacttaag gaaatcctta taagtgactc tcttcttatc
6121 actgtcaaac ccagagttgt aagacaaagt gacttcccca acttcaatat tagttaactc
6181 cttggtgtaa aggtcgggtt tttgcatatt tagtctcttg tcatttacac taatgccaag
6241 cttcccaagg gtcagttctt catcatgata aacaccaact tctattagtg ctaagcaaag
6301 tatgtcatgc atgtaacgcc tatatgtagc ataatcattt tggttttttg gaagatagct
6361 atcagttaat cctctggcga aagcatccaa atcatttggt gcagccagtc tggtgctgag
6421 agttctgcta acactctgaa tgccaacaac aacgttagac atcttgtatt tacaataagt
6481 gatgtttagt tattagagat cggaa
//
