GenomeNet

Database: RefSeq
Entry: NP_001016252
LinkDB: NP_001016252
Original site: NP_001016252 
LOCUS       NP_001016252             151 aa            linear   VRT 11-NOV-2018
DEFINITION  superoxide dismutase [Cu-Zn] [Xenopus tropicalis].
ACCESSION   NP_001016252
VERSION     NP_001016252.1
DBSOURCE    REFSEQ: accession NM_001016252.2
KEYWORDS    RefSeq.
SOURCE      Xenopus tropicalis (tropical clawed frog)
  ORGANISM  Xenopus tropicalis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae;
            Xenopus; Silurana.
REFERENCE   1  (residues 1 to 151)
  AUTHORS   Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW and
            Richardson P.
  TITLE     Genetic and genomic tools for Xenopus research: The NIH Xenopus
            initiative
  JOURNAL   Dev. Dyn. 225 (4), 384-391 (2002)
   PUBMED   12454917
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CR761750.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CR761750.2, CX330412.2 [ECO:0000332]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Xenopus tropicalis"
                     /db_xref="taxon:8364"
                     /chromosome="2"
                     /map="2"
     Protein         1..151
                     /product="superoxide dismutase [Cu-Zn]"
                     /EC_number="1.15.1.1"
                     /note="superoxide dismutase 1, soluble"
                     /calculated_mol_wt=15566
     Site            order(5,7,17,19,49..51,111..112)
                     /site_type="other"
                     /note="E-class dimer interface [polypeptide binding]"
                     /db_xref="CDD:238186"
     Region          10..147
                     /region_name="Sod_Cu"
                     /note="Copper/zinc superoxide dismutase (SODC); pfam00080"
                     /db_xref="CDD:306566"
     Site            order(29,87)
                     /site_type="other"
                     /note="P-class dimer interface [polypeptide binding]"
                     /db_xref="CDD:238186"
     Site            order(45,47,62,79,82,118)
                     /site_type="active"
                     /db_xref="CDD:238186"
     Site            order(45,47,62,118)
                     /site_type="other"
                     /note="Cu2+ binding site [ion binding]"
                     /db_xref="CDD:238186"
     Site            order(62,70,79,82)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:238186"
     CDS             1..151
                     /gene="sod1"
                     /gene_synonym="als; als1; ipoa; sod; sod1-a; sod1-b;
                     xsodb"
                     /coded_by="NM_001016252.2:17..472"
                     /db_xref="GeneID:549006"
                     /db_xref="Xenbase:XB-GENE-1006488"
ORIGIN      
        1 mvravcvlag sgdvkgvvhf qqqdegpvtv egkiygltdg khgfhihefg dntngcisag
       61 phfnpeskth gapedavrhv gdlgnvtakd gvaefkltds lislkgnhsi igrcavvhek
      121 eddlgkggnd eslktgnagg rlacgviglc q
//
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