GenomeNet

Database: RefSeq
Entry: NP_175738
LinkDB: NP_175738
Original site: NP_175738 
LOCUS       NP_175738                967 aa            linear   PLN 14-FEB-2019
DEFINITION  phosphoenolpyruvate carboxylase 1 [Arabidopsis thaliana].
ACCESSION   NP_175738
VERSION     NP_175738.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
DBSOURCE    REFSEQ: accession NM_104209.3
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 967)
  AUTHORS   Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
            White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
            Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
            Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
            Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
            Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
            Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
            Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
            Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
            Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
            Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
            Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
            Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
            Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
            Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
            Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
            Fraser,C.M., Venter,J.C. and Davis,R.W.
  TITLE     Sequence and analysis of chromosome 1 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 816-820 (2000)
   PUBMED   11130712
REFERENCE   2  (residues 1 to 967)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2019) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 967)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (residues 1 to 967)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   5  (residues 1 to 967)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            The reference sequence is identical to AEE32921.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..967
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="1"
                     /ecotype="Columbia"
     Protein         1..967
                     /product="phosphoenolpyruvate carboxylase 1"
                     /calculated_mol_wt=110155
     Region          25..967
                     /region_name="Ppc"
                     /note="Phosphoenolpyruvate carboxylase [Energy production
                     and conversion]; COG2352"
                     /db_xref="CDD:225227"
     Region          164..967
                     /region_name="PEPcase"
                     /note="Phosphoenolpyruvate carboxylase; pfam00311"
                     /db_xref="CDD:278727"
     CDS             1..967
                     /gene="PPC1"
                     /locus_tag="AT1G53310"
                     /gene_synonym="ATPEPC1; ATPPC1; F12M16.21; F12M16_21;
                     PEP(PHOSPHOENOLPYRUVATE) CARBOXYLASE 1; PEPC1;
                     phosphoenolpyruvate carboxylase 1"
                     /coded_by="NM_104209.3:189..3092"
                     /inference="Similar to RNA sequence,
                     EST:INSD:ES079438.1,INSD:AV557162.1,INSD:AA712425.1,
                     INSD:ES210802.1,INSD:AV543509.1,INSD:Z29154.1,
                     INSD:AV547889.1,INSD:AV558282.1,INSD:AV812221.1,
                     INSD:ES002305.1,INSD:ES103845.1,INSD:ES035277.1,
                     INSD:EL174572.1,INSD:ES196681.1,INSD:AV533825.1,
                     INSD:AV557692.1,INSD:EH796017.1,INSD:BP609915.1,
                     INSD:DR283717.1,INSD:DR283715.1,INSD:AV555008.1,
                     INSD:AV547234.1,INSD:ES162393.1,INSD:AV564020.1,
                     INSD:ES184276.1,INSD:EG499449.1,INSD:EL988196.1,
                     INSD:EH927921.1,INSD:EL205528.1,INSD:EL061519.1,
                     INSD:AV547207.1,INSD:EH848500.1,INSD:BP568245.1,
                     INSD:EG499448.1,INSD:EL076818.1,INSD:EL267790.1,
                     INSD:EL248535.1,INSD:ES013972.1,INSD:EH949499.1,
                     INSD:AV548813.1,INSD:ES083786.1,INSD:AV564873.1,
                     INSD:ES000408.1,INSD:ES201648.1,INSD:DR374293.1,
                     INSD:AV555614.1,INSD:EL972668.1,INSD:AV552341.1,
                     INSD:ES026779.1,INSD:EL328887.1,INSD:AV558574.1,
                     INSD:EL165400.1,INSD:AV817220.1,INSD:AV543015.1,
                     INSD:R30301.1,INSD:EL228918.1,INSD:AV565256.1,
                     INSD:EL026832.1,INSD:AV543895.1,INSD:AV796845.1,
                     INSD:BP635834.1,INSD:BP656031.1,INSD:ES030990.1,
                     INSD:EL232451.1,INSD:AV826948.1,INSD:AV561205.1,
                     INSD:DR283716.1,INSD:ES011935.1,INSD:EL078973.1,
                     INSD:EL998533.1,INSD:W43080.1,INSD:W43500.1,
                     INSD:EG435384.1,INSD:EL018934.1,INSD:AV797704.1,
                     INSD:BP623816.1,INSD:AI992716.1,INSD:ES013202.1,
                     INSD:BP612014.1,INSD:BP652059.1,INSD:EL289672.1,
                     INSD:AV818655.1,INSD:ES195462.1,INSD:EH884843.1,
                     INSD:EL227527.1,INSD:ES020728.1,INSD:W43501.1,
                     INSD:Z30862.1,INSD:ES014686.1,INSD:ES187105.1,
                     INSD:ES092297.1,INSD:BP603493.1,INSD:AV790552.1,
                     INSD:BP572029.1,INSD:ES030541.1,INSD:ES063220.1,
                     INSD:ES061071.1,INSD:EL104894.1,INSD:EH887210.1,
                     INSD:EL044402.1,INSD:AV546229.1,INSD:AV559227.1,
                     INSD:BP598215.1,INSD:EL115658.1,INSD:ES043935.1,
                     INSD:EH902569.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:AY057507.1,INSD:AJ532901.1,INSD:BT000647.1"
                     /note="phosphoenolpyruvate carboxylase 1 (PPC1); FUNCTIONS
                     IN: protein binding, phosphoenolpyruvate carboxylase
                     activity; INVOLVED IN: response to salt stress,
                     tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast;
                     EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13
                     growth stages; CONTAINS InterPro DOMAIN/s:
                     Pyruvate/Phosphoenolpyruvate kinase, catalytic core
                     (InterPro:IPR015813), Phosphoenolpyruvate carboxylase,
                     active site (InterPro:IPR018129), Phosphoenolpyruvate
                     carboxylase (InterPro:IPR001449), Phosphoenolpyruvate
                     carboxylase, C-terminal region (InterPro:IPR021135); BEST
                     Arabidopsis thaliana protein match is: phosphoenolpyruvate
                     carboxylase 3 (TAIR:AT3G14940.1); Has 6864 Blast hits to
                     6795 proteins in 1908 species: Archae - 27; Bacteria -
                     2661; Metazoa - 3; Fungi - 0; Plants - 1763; Viruses - 0;
                     Other Eukaryotes - 2410 (source: NCBI BLink)."
                     /db_xref="Araport:AT1G53310"
                     /db_xref="GeneID:841765"
                     /db_xref="TAIR:AT1G53310"
ORIGIN      
        1 manrklekma sidvhlrqlv pgkvseddkl veydallldr fldilqdlhg edlretvqel
       61 yehsaeyegk hepkkleelg svltsldpgd siviakafsh mlnlanlaee vqiayrrrik
      121 klkkgdfvde ssattesdle etfkklvgdl nkspeeifda lknqtvdlvl tahptqsvrr
      181 sllqkhgrir dclaqlyakd itpddkqeld ealqreiqaa frtdeikrtp ptpqdemrag
      241 msyfhetiwk gvpkflrrvd talknigiee rvpynapliq fsswmggdrd gnprvtpevt
      301 rdvcllarmm aatmyfnqie dlmfemsmwr cndelrarad evhansrkda akhyiefwks
      361 ipttepyrvi lgdvrdklyh trerahqlls nghsdvpvea tfinleqfle plelcyrslc
      421 scgdrpiadg slldflrqvs tfglslvrld irqesdrhtd vldaitthld igsyrewsee
      481 rrqewllsel sgkrplfgsd lpkteeiadv ldtfhviael padsfgayii smatapsdvl
      541 avellqrecr vkqplrvvpl fekladleaa paavarlfsv dwyknringk qevmigysds
      601 gkdagrlsaa wqlykaqeel vkvakeygvk ltmfhgrggt vgrgggpthl ailsqppdti
      661 ngslrvtvqg evieqsfgee hlcfrtlqrf taatlehgmr ppispkpewr alldemavva
      721 teeyrsvvfq eprfveyfrl atpeleygrm nigsrpskrk psggieslra ipwifawtqt
      781 rfhlpvwlgf gsairhviek dvrnlhmlqd myqhwpffrv tidliemvfa kgdpgiaaly
      841 dkllvseelw pfgeklranf eetkklilqt aghkdllegd pylkqrlrlr dsyittlnvc
      901 qaytlkrird psyhvtlrph iskeiaessk pakelielnp tseyapgled tliltmkgia
      961 aglqntg
//
DBGET integrated database retrieval system