GenomeNet

Database: RefSeq
Entry: NP_312912
LinkDB: NP_312912
Original site: NP_312912 
LOCUS       NP_312912                883 aa            linear   CON 15-AUG-2018
DEFINITION  phosphoenolpyruvate carboxylase [Escherichia coli O157:H7 str.
            Sakai].
ACCESSION   NP_312912
VERSION     NP_312912.1
DBLINK      BioProject: PRJNA226
            BioSample: SAMN01911278
DBSOURCE    REFSEQ: accession NC_002695.2
KEYWORDS    RefSeq.
SOURCE      Escherichia coli O157:H7 str. Sakai
  ORGANISM  Escherichia coli O157:H7 str. Sakai
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1
  AUTHORS   Hayashi,T., Makino,K., Ohnishi,M., Kurokawa,K., Ishii,K.,
            Yokoyama,K., Han,C.G., Ohtsubo,E., Nakayama,K., Murata,T.,
            Tanaka,M., Tobe,T., Iida,T., Takami,H., Honda,T., Sasakawa,C.,
            Ogasawara,N., Yasunaga,T., Kuhara,S., Shiba,T., Hattori,M. and
            Shinagawa,H.
  TITLE     Complete genome sequence of enterohemorrhagic Escherichia coli
            O157:H7 and genomic comparison with a laboratory strain K-12
  JOURNAL   DNA Res. 8 (1), 11-22 (2001)
   PUBMED   11258796
  REMARK    Erratum:[DNA Res 2001 Apr 27;8(2):96]
REFERENCE   2
  AUTHORS   Yokoyama,K., Makino,K., Kubota,Y., Watanabe,M., Kimura,S.,
            Yutsudo,C.H., Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I.,
            Abe,H., Yoh,M., Iida,T., Ohnishi,M., Hayashi,T., Yasunaga,T.,
            Honda,T., Sasakawa,C. and Shinagawa,H.
  TITLE     Complete nucleotide sequence of the prophage VT1-Sakai carrying the
            Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli
            O157:H7 strain derived from the Sakai outbreak
  JOURNAL   Gene 258 (1-2), 127-139 (2000)
   PUBMED   11111050
REFERENCE   3
  AUTHORS   Ohnishi,M., Murata,T., Nakayama,K., Kuhara,S., Hattori,M.,
            Kurokawa,K., Yasunaga,T., Yokoyama,K., Makino,K., Shinagawa,H. and
            Hayashi,T.
  TITLE     Comparative analysis of the whole set of rRNA operons between an
            enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an
            Escherichia coli K-12 strain MG1655
  JOURNAL   Syst. Appl. Microbiol. 23 (3), 315-324 (2000)
   PUBMED   11108008
REFERENCE   4
  AUTHORS   Makino,K., Yokoyama,K., Kubota,Y., Yutsudo,C.H., Kimura,S.,
            Kurokawa,K., Ishii,K., Hattori,M., Tatsuno,I., Abe,H., Iida,T.,
            Yamamoto,K., Onishi,M., Hayashi,T., Yasunaga,T., Honda,T.,
            Sasakawa,C. and Shinagawa,H.
  TITLE     Complete nucleotide sequence of the prophage VT2-Sakai carrying the
            verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7
            derived from the Sakai outbreak
  JOURNAL   Genes Genet. Syst. 74 (5), 227-239 (1999)
   PUBMED   10734605
REFERENCE   5  (residues 1 to 883)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-AUG-2018) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   6  (residues 1 to 883)
  AUTHORS   Ogura,Y., Kurokawa,K., Hayashi,T. and Hattori,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JUN-2000) Contact:Yoshitoshi Ogura Kyushu University;
            31-1 Maidashi Higashi-ku, Fukuoka, Fukuoka 812-8582, Japan
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to BAB38308.
            On May 10, 2018 this sequence version replased gi: 47118301
            
            This update is obtained as follows: the Sakai genome was
            resequenced by illumina MiSeq and PacBio RS II sequencers and 78
            sites of single base error, 11 sites of insertion (10 one-base
            insertions and a 141-base insertion) and 16 sites of deletion (14
            one-base deletions, a three-base deletion and a six-base deletion)
            were corrected. Annotation was performed using DFAST
            auto-annotation system with manual curation.
            
            This work was done in collaboration with Tetsuya Hayashi, Makoto
            Ohnishi, Keisuke Nakayama (Miyazaki Medical College), Kozo Makino,
            Ken Kurokawa, Katsushi Yokoyama, Masashi Tanaka, Takeshi Honda,
            Teruo Yasunaga, Hideo Shinagawa (Osaka University), Takahiro Murata
            (Shinshu University), Chang-Gyun Han, Eiichi Ohtsubo, Toru Tobe,
            Chihiro Sasakawa (University of Tokyo), Hideto Takami (Japan Marine
            Science and Technology Center), Naotake Ogasawara (Nara Institute
            of Science and Technology), Satoru Kuhara (Kuyshu University), and
            supported by the Research for the Future Program of the Japan
            Society for the Promotion of Science.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..883
                     /organism="Escherichia coli O157:H7 str. Sakai"
                     /strain="Sakai"
                     /sub_strain="RIMD 0509952"
                     /serovar="O157:H7"
                     /db_xref="taxon:386585"
     Protein         1..883
                     /product="phosphoenolpyruvate carboxylase"
                     /calculated_mol_wt=98976
     Region          1..883
                     /region_name="PRK00009"
                     /note="phosphoenolpyruvate carboxylase; Reviewed"
                     /db_xref="CDD:234570"
     CDS             1..883
                     /gene="ppc"
                     /locus_tag="ECs_4885"
                     /coded_by="complement(NC_002695.2:4957457..4960108)"
                     /transl_table=11
CONTIG      join(WP_001005582.1:1..883)
ORIGIN      
        1 mneqysalrs nvsmlgkvlg etikdalgeh ilervetirk lskssragnd anrqellttl
       61 qnlsndellp varafsqfln lantaeqyhs ispkgeaasn peviartlrk lknqpelsed
      121 tikkavesls lelvltahpt eitrrtlihk mvevnaclkq ldnkdiadye hnqlmrrlrq
      181 liaqswhtde irklrpspvd eakwgfavve nslwqgvpny lrelneqlee nlgyklpvef
      241 vpvrftswmg gdrdgnpnvt aditrhvlll srwkatdlfl kdiqvlvsel smveatpell
      301 alvgeegaae pyrylmknlr srlmatqawl earlkgeelp kpeglltqne elweplyacy
      361 qslqacgmgi iangdlldtl rrvkcfgvpl vridirqest rhtealgelt rylgigdyes
      421 wseadkqafl irelnskrpl lprnwqpsae trevldtcqv iaeapqgsia ayvismaktp
      481 sdvlavhlll keagigfamp vaplfetldd lnnandvmtq llnidwyrgl iqgkqmvmig
      541 ysdsakdagv maaswaqyqa qdaliktcek agieltlfhg rggsigrgga pahaallsqp
      601 pgslkgglrv teqgemirfk yglpeitvss lslytgaile anllpppepk eswrrimdel
      661 sviscdlyrg yvrenkdfvp yfrsatpeqe lgklplgsrp akrrptggve slraipwifa
      721 wtqnrlmlpa wlgagtalqk vvedgkqsel eamcrdwpff strlgmlemv fakadlwlae
      781 yydqrlvdkt lwplgkelrn lqeedikvvl aiandshlma dlpwiaesiq lrniytdpln
      841 vlqaellhrs rqaekegqep dprveqalmv tiagiaagmr ntg
//
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