LOCUS NP_416976 205 aa linear CON 09-MAR-2022
DEFINITION hydrogenase 4 component A [Escherichia coli str. K-12 substr.
MG1655].
ACCESSION NP_416976
VERSION NP_416976.4
DBLINK BioProject: PRJNA57779
BioSample: SAMN02604091
DBSOURCE REFSEQ: accession NC_000913.3
KEYWORDS RefSeq.
SOURCE Escherichia coli str. K-12 substr. MG1655
ORGANISM Escherichia coli str. K-12 substr. MG1655
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
Enterobacteriaceae; Escherichia.
REFERENCE 1 (residues 1 to 205)
AUTHORS Riley,M., Abe,T., Arnaud,M.B., Berlyn,M.K., Blattner,F.R.,
Chaudhuri,R.R., Glasner,J.D., Horiuchi,T., Keseler,I.M., Kosuge,T.,
Mori,H., Perna,N.T., Plunkett,G. III, Rudd,K.E., Serres,M.H.,
Thomas,G.H., Thomson,N.R., Wishart,D. and Wanner,B.L.
TITLE Escherichia coli K-12: a cooperatively developed annotation
snapshot--2005
JOURNAL Nucleic Acids Res. 34 (1), 1-9 (2006)
PUBMED 16397293
REMARK Publication Status: Online-Only
REFERENCE 2 (residues 1 to 205)
AUTHORS Hayashi,K., Morooka,N., Yamamoto,Y., Fujita,K., Isono,K., Choi,S.,
Ohtsubo,E., Baba,T., Wanner,B.L., Mori,H. and Horiuchi,T.
TITLE Highly accurate genome sequences of Escherichia coli K-12 strains
MG1655 and W3110
JOURNAL Mol. Syst. Biol. 2, 2006 (2006)
PUBMED 16738553
REFERENCE 3 (residues 1 to 205)
AUTHORS Blattner,F.R., Plunkett,G. III, Bloch,C.A., Perna,N.T., Burland,V.,
Riley,M., Collado-Vides,J., Glasner,J.D., Rode,C.K., Mayhew,G.F.,
Gregor,J., Davis,N.W., Kirkpatrick,H.A., Goeden,M.A., Rose,D.J.,
Mau,B. and Shao,Y.
TITLE The complete genome sequence of Escherichia coli K-12
JOURNAL Science 277 (5331), 1453-1462 (1997)
PUBMED 9278503
REFERENCE 4 (residues 1 to 205)
AUTHORS Arnaud,M., Berlyn,M.K.B., Blattner,F.R., Galperin,M.Y.,
Glasner,J.D., Horiuchi,T., Kosuge,T., Mori,H., Perna,N.T.,
Plunkett,G. III, Riley,M., Rudd,K.E., Serres,M.H., Thomas,G.H. and
Wanner,B.L.
TITLE Workshop on Annotation of Escherichia coli K-12
JOURNAL Unpublished
REMARK Woods Hole, Mass., on 14-18 November 2003 (sequence corrections)
REFERENCE 5 (residues 1 to 205)
AUTHORS Glasner,J.D., Perna,N.T., Plunkett,G. III, Anderson,B.D.,
Bockhorst,J., Hu,J.C., Riley,M., Rudd,K.E. and Serres,M.H.
TITLE ASAP: Escherichia coli K-12 strain MG1655 version m56
JOURNAL Unpublished
REMARK ASAP download 10 June 2004 (annotation updates)
REFERENCE 6 (residues 1 to 205)
AUTHORS Hayashi,K., Morooka,N., Mori,H. and Horiuchi,T.
TITLE A more accurate sequence comparison between genomes of Escherichia
coli K12 W3110 and MG1655 strains
JOURNAL Unpublished
REMARK GenBank accessions AG613214 to AG613378 (sequence corrections)
REFERENCE 7 (residues 1 to 205)
AUTHORS Perna,N.T.
TITLE Escherichia coli K-12 MG1655 yqiK-rfaE intergenic region, genomic
sequence correction
JOURNAL Unpublished
REMARK GenBank accession AY605712 (sequence corrections)
REFERENCE 8 (residues 1 to 205)
AUTHORS Rudd,K.E.
TITLE A manual approach to accurate translation start site annotation: an
E. coli K-12 case study
JOURNAL Unpublished
REFERENCE 9 (residues 1 to 205)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (08-MAR-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 10 (residues 1 to 205)
AUTHORS Blattner,F.R. and Plunkett,G. III.
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2014) Laboratory of Genetics, University of
Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA
REMARK Protein update by submitter
REFERENCE 11 (residues 1 to 205)
AUTHORS Blattner,F.R. and Plunkett,G. III.
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2013) Laboratory of Genetics, University of
Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA
REMARK Protein update by submitter
REFERENCE 12 (residues 1 to 205)
AUTHORS Blattner,F.R. and Plunkett,G. III.
TITLE Direct Submission
JOURNAL Submitted (26-SEP-2013) Laboratory of Genetics, University of
Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA
REMARK Sequence update by submitter
REFERENCE 13 (residues 1 to 205)
AUTHORS Rudd,K.E.
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2013) Department of Biochemistry and Molecular
Biology, University of Miami Miller School of Medicine, 118 Gautier
Bldg., Miami, FL 33136, USA
REMARK Sequence update by submitter
REFERENCE 14 (residues 1 to 205)
AUTHORS Rudd,K.E.
TITLE Direct Submission
JOURNAL Submitted (24-APR-2007) Department of Biochemistry and Molecular
Biology, University of Miami Miller School of Medicine, 118 Gautier
Bldg., Miami, FL 33136, USA
REMARK Annotation update from ecogene.org as a multi-database
collaboration
REFERENCE 15 (residues 1 to 205)
AUTHORS Plunkett,G. III.
TITLE Direct Submission
JOURNAL Submitted (07-FEB-2006) Laboratory of Genetics, University of
Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA
REMARK Protein updates by submitter
REFERENCE 16 (residues 1 to 205)
AUTHORS Plunkett,G. III.
TITLE Direct Submission
JOURNAL Submitted (10-JUN-2004) Laboratory of Genetics, University of
Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA
REMARK Sequence update by submitter
REFERENCE 17 (residues 1 to 205)
AUTHORS Plunkett,G. III.
TITLE Direct Submission
JOURNAL Submitted (13-OCT-1998) Laboratory of Genetics, University of
Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA
REFERENCE 18 (residues 1 to 205)
AUTHORS Blattner,F.R. and Plunkett,G. III.
TITLE Direct Submission
JOURNAL Submitted (02-SEP-1997) Laboratory of Genetics, University of
Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA
REFERENCE 19 (residues 1 to 205)
AUTHORS Blattner,F.R. and Plunkett,G. III.
TITLE Direct Submission
JOURNAL Submitted (16-JAN-1997) Laboratory of Genetics, University of
Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to AAC75534.
On Mar 21, 2006 this sequence version replaced NP_416976.3.
Changes to proteins and annotation made on March 7, 2022. Current
U00096 annotation updates are derived from EcoCyc
https://ecocyc.org/. Suggestions for updates can be sent to
biocyc-support@ai.sri.com. These updates are being generated from a
collaboration that includes EcoCyc, the University of Wisconsin,
UniProtKB/Swiss-Prot, and the National Center for Biotechnology
Information (NCBI).
COMPLETENESS: full length.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..205
/organism="Escherichia coli str. K-12 substr. MG1655"
/strain="K-12"
/sub_strain="MG1655"
/db_xref="taxon:511145"
Protein 1..205
/product="hydrogenase 4 component A"
/calculated_mol_wt=22023
Region 4..170
/region_name="HycB_like"
/note="HycB, HydN and similar proteins; cd10554"
/db_xref="CDD:319876"
CDS 1..205
/gene="hyfA"
/locus_tag="b2481"
/gene_synonym="ECK2477; yffE"
/coded_by="NC_000913.3:2601201..2601818"
/transl_table=11
/db_xref="UniProtKB/Swiss-Prot:P23481"
/db_xref="ASAP:ABE-0008179"
/db_xref="ECOCYC:EG11150"
/db_xref="GeneID:946959"
CONTIG join(WP_001336048.1:1..205)
ORIGIN
1 mnrfvvaepl wctgcntcla acsdvhktqg lqqhprlala ktstitapvv chhceeapcl
61 qvcpvnaisq rddaiqlnes lcigcklcav vcpfgaisas gsrpvnahaq yvfqaegslk
121 dgeenaptqh allrwepgvq tvavkcdlcd flpegpacvr acpnqalrli tgdslqrqmk
181 ekqrlaaswf anggedplsl tqeqr
//
