LOCUS NP_504523 1829 aa linear INV 22-NOV-2023
DEFINITION Protein let-418 [Caenorhabditis elegans].
ACCESSION NP_504523
VERSION NP_504523.1
DBLINK BioProject: PRJNA158
DBSOURCE REFSEQ: accession NM_072122.6
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (residues 1 to 1829)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (residues 1 to 1829)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 1829)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (residues 1 to 1829)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. The
reference sequence is identical to CCD62685.
FEATURES Location/Qualifiers
source 1..1829
/organism="Caenorhabditis elegans"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="V"
Protein 1..1829
/product="Protein let-418"
/calculated_mol_wt=209021
Region 95..147
/region_name="CHDNT"
/note="CHDNT (NUC034) domain; pfam08073"
/db_xref="CDD:429819"
Region 258..300
/region_name="PHD1_CHD_II"
/note="PHD finger 1 found in class II
Chromodomain-Helicase-DNA binding (CHD) proteins; cd15531"
/db_xref="CDD:277006"
Site order(258,267..271,275,295)
/site_type="other"
/note="putative histone H3 binding site [polypeptide
binding]"
/db_xref="CDD:277006"
Region 295..323
/region_name="RanBP2-type Zn finger"
/note="RanBP2-type Zn finger [structural motif]"
/db_xref="CDD:275375"
Region 320..362
/region_name="PHD_SF"
/note="PHD finger superfamily; cl22851"
/db_xref="CDD:451427"
Site order(329..332,336,357)
/site_type="other"
/note="histone H3 binding site [polypeptide binding]"
/db_xref="CDD:276966"
Region 370..448
/region_name="CD1_tandem_CHD3-4_like"
/note="repeat 1 of the paired tandem chromodomains of
chromodomain helicase DNA-binding protein 3 and 4, and
similar proteins; cd18667"
/db_xref="CDD:349314"
Site order(419,421..422,426)
/site_type="other"
/note="peptide binding site [polypeptide binding]"
/db_xref="CDD:349314"
Region 486..539
/region_name="CD2_tandem_CHD3-4_like"
/note="repeat 2 of the paired tandem chromodomains of
chromodomain helicase DNA-binding protein 3 and 4, and
similar proteins; cd18662"
/db_xref="CDD:349309"
Site order(506,523)
/site_type="other"
/note="putative peptide binding site [polypeptide
binding]"
/db_xref="CDD:349309"
Region 590..>1114
/region_name="PLN03142"
/note="Probable chromatin-remodeling complex ATPase chain;
Provisional"
/db_xref="CDD:215601"
Region 1188..1235
/region_name="DUF1087"
/note="Domain of Unknown Function (DUF1087); pfam06465"
/db_xref="CDD:428956"
Region 1276..1406
/region_name="DUF1086"
/note="Domain of Unknown Function (DUF1086); pfam06461"
/db_xref="CDD:428953"
Region 1525..1673
/region_name="CHDCT2"
/note="CHDCT2 (NUC038) domain; pfam08074"
/db_xref="CDD:429820"
CDS 1..1829
/gene="let-418"
/locus_tag="CELE_F26F12.7"
/standard_name="F26F12.7"
/coded_by="NM_072122.6:29..5518"
/note="Confirmed by transcript evidence"
/db_xref="EnsemblGenomes-Gn:WBGene00002637"
/db_xref="EnsemblGenomes-Tr:F26F12.7"
/db_xref="GeneID:178970"
/db_xref="GOA:G5EBZ4"
/db_xref="InterPro:IPR000330"
/db_xref="InterPro:IPR000953"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR001965"
/db_xref="InterPro:IPR002464"
/db_xref="InterPro:IPR009462"
/db_xref="InterPro:IPR009463"
/db_xref="InterPro:IPR011011"
/db_xref="InterPro:IPR012957"
/db_xref="InterPro:IPR012958"
/db_xref="InterPro:IPR013083"
/db_xref="InterPro:IPR014001"
/db_xref="InterPro:IPR016197"
/db_xref="InterPro:IPR019786"
/db_xref="InterPro:IPR019787"
/db_xref="InterPro:IPR023780"
/db_xref="InterPro:IPR027417"
/db_xref="InterPro:IPR038718"
/db_xref="UniProtKB/Swiss-Prot:G5EBZ4"
/db_xref="WormBase:WBGene00002637"
ORIGIN
1 msteedpslv daeesmeegs vtqdateete eeeeqeqgde agpserkrss rkkggkggkk
61 gskksaaaas kveipdpyns tseevcaaig ltdvefdyde eefqgisnlk tfssiikpqi
121 leanpgtnvs kmypmfqvky keyqdhmaaq gkpvqkqarg sktpavstpv ipprsaptkt
181 rsarrkrrds dapdsdqefe afikqqeqle ddlvkdkeda rikraaeree kkkgaleaar
241 aakkaklekg eeaenndyce eckqdgelll cdtcprayht vcidenmeep pegdwscahc
301 iehgpevvke epakqndefc kicketenll lcdscvcsfh aycidpplte vpkeetwscp
361 rcetvkpehk iekilcwrwk eipypeplea gkeassddam lkpprkmepr rereffvkwk
421 ylsywqcswv semllevhfr mlillywrkn dsdappefee svtsrhhsdn dpyklrerfy
481 qygikpewmq ihriinhqsy aksqqdylvk wkelsydqat werddsnian yeeaiikywq
541 hresklnedi pknvqkmiak hreakglppk edekkkkkre kidirkkyev qpdyvtetgg
601 klhpyqlegl nwlrhcwsng tdailademg lgktvqsltf lyslmkeghc kgpfliaapl
661 stiinwerea eqwcpdfyvv tyvglrdarv vlrehefsfv egavrsgpka skmkttenmk
721 fhvlltsyet inmdktilss iewgalvvde ahrlknnqsl ffknlneyti hyrvlltgtp
781 lqnnleelfh llnflskerf nqleaftaef neiskedqie klhnllgphm lrrlkadvlt
841 gmpskseliv rvelsamqkk wykniltrnf dalnvknggt qmslmnvlme lkkccnhpyl
901 fvkaeleapk ekngmyegta liknsgkfvl lqkmlrklkd gghrvlifsq mtrmldimed
961 lceyegyrye ridgsimgqm rqdaidryna pgaqqfifll stragglgin latadtviiy
1021 dsdwnphndi qafsrahrlg qkhkvmiyrf vtkksveeki tsvakkkmll nhlvvraglg
1081 gkegktmskt elddvlrwgt eelfsedlda aegegsekkg aaaqeivwdd aavdalldrs
1141 nkeetpaged geekaewqne ylssfkvasy qtketegqee eeeeetevik edekepdpdy
1201 wekllkhhye qdreielqkl gkgkrvrkqi nyasenmgtd wskqnqtqdd dddnesyrgs
1261 dngdglnsde ddydekkkrr rdeekmpplm akvngqveil gfnprqrkaf ygavmrwgmp
1321 pqdshqsqwl vrdlrnksek vfrayaslfm rhlcepgadg hdtfndgvpr eglnrqhvlg
1381 rigllslvrr kvqefeqyng qwsmpeiqde vlakaangsa qgssrstpkp keepkeepme
1441 kedatetvng atsepatdae seqnapvdep mdtdeakepk eepietekpr aarpsfkfni
1501 cdggftelhs lwaneekvar ngkeyeiwyr rhdywllagv vvhgygrfqa nfndiindpr
1561 fsvlnepfke vgaeatgsdi kakfmqrrfk lieqslviee qlrraahanr hlqpdnvgpl
1621 aqrfadleni aesqaniake ssagnrnana vlhktlvqld eilsdmkadv srlpstftql
1681 atvterlnmt erqilsrltt kdedaianrs vlpppgpfvt pilrqqmdgi qpkfaalysk
1741 fmsengerme edepveaeee egvkqepdde tqdsaeappv lsaevnsdds ndvpstsaaa
1801 avssetaada epasaedqap tdepepmet
//
