GenomeNet

Database: RefSeq
Entry: NP_504887
LinkDB: NP_504887
Original site: NP_504887 
LOCUS       NP_504887                303 aa            linear   INV 22-NOV-2023
DEFINITION  G-protein coupled receptors family 1 profile domain-containing
            protein [Caenorhabditis elegans].
ACCESSION   NP_504887
VERSION     NP_504887.1
DBLINK      BioProject: PRJNA158
DBSOURCE    REFSEQ: accession NM_072486.1
KEYWORDS    RefSeq.
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (residues 1 to 303)
  AUTHORS   Sulson,J.E. and Waterston,R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282 (5396), 2012-2018 (1998)
   PUBMED   9851916
  REMARK    Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE   2  (residues 1 to 303)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 303)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
            Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE   4  (residues 1 to 303)
  AUTHORS   Sulson,J.E. and Waterston,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
            Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
            at Washington University, St. Louis, MO 63110, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by WormBase. The
            reference sequence is identical to CCD62700.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Caenorhabditis elegans"
                     /strain="Bristol N2"
                     /db_xref="taxon:6239"
                     /chromosome="V"
     Protein         1..303
                     /product="G-protein coupled receptors family 1 profile
                     domain-containing protein"
                     /calculated_mol_wt=34562
     Region          11..35
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410626"
     Region          18..279
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:452889"
     Region          42..68
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410626"
     Site            order(64,67..68,79..84,86..87,90,134,136..137,160,
                     163..165,167..169,171..172,222,225..226,228..229,232,
                     242..243,245..247,250,253..254)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:410626"
     Region          79..109
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410626"
     Region          121..137
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410626"
     Region          160..185
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410626"
     Region          206..232
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410626"
     Region          243..267
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410626"
     CDS             1..303
                     /gene="srsx-24"
                     /locus_tag="CELE_C03G6.16"
                     /standard_name="C03G6.16"
                     /coded_by="NM_072486.1:1..912"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00015401"
                     /db_xref="EnsemblGenomes-Tr:C03G6.16"
                     /db_xref="GeneID:182178"
                     /db_xref="GOA:O01459"
                     /db_xref="InterPro:IPR000276"
                     /db_xref="InterPro:IPR017452"
                     /db_xref="InterPro:IPR019424"
                     /db_xref="UniProtKB/TrEMBL:O01459"
                     /db_xref="WormBase:WBGene00015401"
ORIGIN      
        1 myklefplyv visyialaii gilgnftiil ititnkclhs rcyilialma cfnfvyciya
       61 aqlrvmilin esvmssstcf lisiygifam nmqsllalfi gidrvyvivy pgkyaklsin
      121 yyylmvtlca lisllvtfck fvfysdevvt ncllstalhg ipfkiwqfmn ffitvavifv
      181 yslahinfqt lkkstvhmkt aksvdrimks mliviafyvc twtlglcgmf lsqflqaddi
      241 hafiiqklsg wlvlsnssln vfiyfwrtpd yrkailklfg isksvvdsri hvsympnnpv
      301 aif
//
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