LOCUS NP_504887 303 aa linear INV 22-NOV-2023
DEFINITION G-protein coupled receptors family 1 profile domain-containing
protein [Caenorhabditis elegans].
ACCESSION NP_504887
VERSION NP_504887.1
DBLINK BioProject: PRJNA158
DBSOURCE REFSEQ: accession NM_072486.1
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (residues 1 to 303)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (residues 1 to 303)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 303)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (residues 1 to 303)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. The
reference sequence is identical to CCD62700.
FEATURES Location/Qualifiers
source 1..303
/organism="Caenorhabditis elegans"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="V"
Protein 1..303
/product="G-protein coupled receptors family 1 profile
domain-containing protein"
/calculated_mol_wt=34562
Region 11..35
/region_name="TM helix 1"
/note="TM helix 1 [structural motif]"
/db_xref="CDD:410626"
Region 18..279
/region_name="7tm_GPCRs"
/note="seven-transmembrane G protein-coupled receptor
superfamily; cl28897"
/db_xref="CDD:452889"
Region 42..68
/region_name="TM helix 2"
/note="TM helix 2 [structural motif]"
/db_xref="CDD:410626"
Site order(64,67..68,79..84,86..87,90,134,136..137,160,
163..165,167..169,171..172,222,225..226,228..229,232,
242..243,245..247,250,253..254)
/site_type="other"
/note="putative ligand binding pocket [chemical binding]"
/db_xref="CDD:410626"
Region 79..109
/region_name="TM helix 3"
/note="TM helix 3 [structural motif]"
/db_xref="CDD:410626"
Region 121..137
/region_name="TM helix 4"
/note="TM helix 4 [structural motif]"
/db_xref="CDD:410626"
Region 160..185
/region_name="TM helix 5"
/note="TM helix 5 [structural motif]"
/db_xref="CDD:410626"
Region 206..232
/region_name="TM helix 6"
/note="TM helix 6 [structural motif]"
/db_xref="CDD:410626"
Region 243..267
/region_name="TM helix 7"
/note="TM helix 7 [structural motif]"
/db_xref="CDD:410626"
CDS 1..303
/gene="srsx-24"
/locus_tag="CELE_C03G6.16"
/standard_name="C03G6.16"
/coded_by="NM_072486.1:1..912"
/note="Partially confirmed by transcript evidence"
/db_xref="EnsemblGenomes-Gn:WBGene00015401"
/db_xref="EnsemblGenomes-Tr:C03G6.16"
/db_xref="GeneID:182178"
/db_xref="GOA:O01459"
/db_xref="InterPro:IPR000276"
/db_xref="InterPro:IPR017452"
/db_xref="InterPro:IPR019424"
/db_xref="UniProtKB/TrEMBL:O01459"
/db_xref="WormBase:WBGene00015401"
ORIGIN
1 myklefplyv visyialaii gilgnftiil ititnkclhs rcyilialma cfnfvyciya
61 aqlrvmilin esvmssstcf lisiygifam nmqsllalfi gidrvyvivy pgkyaklsin
121 yyylmvtlca lisllvtfck fvfysdevvt ncllstalhg ipfkiwqfmn ffitvavifv
181 yslahinfqt lkkstvhmkt aksvdrimks mliviafyvc twtlglcgmf lsqflqaddi
241 hafiiqklsg wlvlsnssln vfiyfwrtpd yrkailklfg isksvvdsri hvsympnnpv
301 aif
//