LOCUS NP_563806 2001 aa linear PLN 20-OCT-2022
DEFINITION ATP-dependent helicase family protein [Arabidopsis thaliana].
ACCESSION NP_563806
VERSION NP_563806.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
DBSOURCE REFSEQ: accession NM_100680.4
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 2001)
AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
Fraser,C.M., Venter,J.C. and Davis,R.W.
TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 816-820 (2000)
PUBMED 11130712
REFERENCE 2 (residues 1 to 2001)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 2001)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (residues 1 to 2001)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 5 (residues 1 to 2001)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
The reference sequence is identical to AEE28236.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..2001
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="1"
/ecotype="Columbia"
Protein 1..2001
/product="ATP-dependent helicase family protein"
/calculated_mol_wt=218439
Region <523..>850
/region_name="PLN03142"
/note="Probable chromatin-remodeling complex ATPase chain;
Provisional"
/db_xref="CDD:215601"
Region 553..666
/region_name="SF2_C_SNF"
/note="C-terminal helicase domain of the SNF family
helicases; cd18793"
/db_xref="CDD:350180"
Site order(584..585,599,640,661..662)
/site_type="DNA binding"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:350180"
Region 1740..1969
/region_name="PRK04654"
/note="sec-independent translocase; Provisional"
/db_xref="CDD:135173"
Region <1858..1962
/region_name="PHA03247"
/note="large tegument protein UL36; Provisional"
/db_xref="CDD:223021"
CDS 1..2001
/gene="MOM"
/locus_tag="AT1G08060"
/gene_synonym="MAINTENANCE OF METHYLATION; MOM1; MORPHEUS
MOLECULE; MORPHEUS MOLECULE 1; T6D22.14; T6D22_14"
/coded_by="NM_100680.4:310..6315"
/inference="Similar to RNA sequence,
EST:INSD:ES020078.1,INSD:EL031990.1,INSD:EH854224.1,
INSD:ES163713.1,INSD:BE525189.1,INSD:EH800338.1,
INSD:AA597930.1,INSD:ES014185.1,INSD:AU230038.1,
INSD:EL199217.1,INSD:EH851129.1,INSD:EL232181.1,
INSD:EL203785.1,INSD:EL257845.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT006219.1,INSD:AF213627.1"
/note="MORPHEUS MOLECULE (MOM); INVOLVED IN: chromatin
silencing; LOCATED IN: nucleus; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 7 growth stages; BEST
Arabidopsis thaliana protein match is: chromatin
remodeling 4 (TAIR:AT5G44800.1); Has 8505 Blast hits to
7857 proteins in 726 species: Archae - 6; Bacteria - 999;
Metazoa - 3217; Fungi - 2019; Plants - 785; Viruses - 95;
Other Eukaryotes - 1384 (source: NCBI BLink)."
/db_xref="Araport:AT1G08060"
/db_xref="GeneID:837322"
/db_xref="TAIR:AT1G08060"
ORIGIN
1 mkkdekiglt grtiytrsla asipasveqe tpglrrssrg tpstkvitpa satrkserla
61 pspasvskks ggivknstps slrrsnrgkt evslqsskgs dnsirkgdts pdieqrkdsv
121 eestdkikpi msarsyralf rgklkeseal vdaspneeel vvvgcsrrip agnddvqgkt
181 dcpppadags krlpvdetsl dkgtdfplks vtetekivld aspivetgdd svigspsenl
241 etqklqdgkt dcsppanaes ktlpvgetsl ekeypqkfqd dntdclppan aeskrlpvge
301 tslekdtdfp lksttetgkm vlyaspivet rddsvicsps tnletqkllv sktgletdiv
361 lplkrkrdta eieldacatv angddhvmss dgvipspsgc kndnrpemcn tckkrqkvng
421 dcqnrsvcsc ivqpveesdn vtqdmketgp vtsreyeeng qiqhgkssdp kfyssvypey
481 wvpvqlsdvq leqycqtlfs kslslsslsk idlgaleetl nsvrktcdhp yvmdaslkql
541 ltknlelhei ldveikasgk lhlldkmlth ikknglkavv fyqatqtpeg lllgniledf
601 vgqrfgpksy ehgiysskkn sainnfnkes qccvllletr acsqtikllr adafilfgss
661 lnpshdvkhv ekikiescse rtkifrlysv ctveekalil arqnkrqnka venlnrslth
721 allmwgasyl fdkldhfhss etpdsgvsfe qsimdgvihe fssilsskgg eenevklcll
781 leakhaqgty ssdstlfged hiklsdeesp nifwskllgg knpmwkypsd tpqrnrkrvq
841 yfegseaspk tgdggnakkr kkasddvtdp rvtdppvddd erkasgkdhm galespkvit
901 lqssckssgt dgtldgndaf glysmgshis gipedmlasq dwgkipdesq rrlhtvlkpk
961 maklcqvlhl sdactsmvgn fleyvienhr iyeepattfq afqialswia allvkqilsh
1021 keslvranse lafkcsrvev dyiysilscm kslflehtqg lqfdcfgtns kqsvvstklv
1081 neslsgatvr dekintksmr nssedeecmt ekrcshysta trdiektisg ikkkykkqvq
1141 klvqeheekk mellnmyadk kqkletsksv eaaviritcs rtstqvgdlk lldhnyerkf
1201 deikseknec lksleqmhdv akkklaedea cwinrikswa aklkvcvpiq sgnnkhfsgs
1261 snisqnapdv qicnnanvea tyadtncmas kvnqvpeaen tlgtmsggst qqvhemvdvr
1321 ndetmdvsal sreqltksqs nehasitvpe ilipadcqee faalnvhlse dqncdritsa
1381 asdedvssrv pevsqslenl saspefslnr eealvttenr rtshvgfdtd nildqqnred
1441 csldqeipde lampvqhlas vvetrgaaes dqygqdicpm psslagkqpd paantesenl
1501 eeaiepqsag setvettdfa ashqgdqvtc pllssptgnq papeaniegq nintsaephv
1561 agpdavesgd yavidqetmg aqdacslpsg svgtqsdlga niegqnvttv aqlptdgsda
1621 vvtggspvsd qcaqdaspmp lsspgnhpdt avniegldnt svaephisgs dacemeisep
1681 gpqverstfa nlfheggveh sagvtalvps llnngteqia vqpvpqipfp vfndpflhel
1741 eklrresens kktfeekksi lkaelerkma evqaefrrkf heveaehntr ttkiekdknl
1801 vimnkllana flskctdkkv spsgaprgki qqlaqraaqv salrnyiapq qlqassfpap
1861 alvsaplqlq qssfpapgpa plqpqassfp ssvsrpsall lnfavcpmpq prqplisnia
1921 ptpsvtpatn pglrspaphl nsyrpssstp vatatptssv ppqaltysav siqqqqeqqp
1981 qqslssglqs nnevvclsdd e
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