LOCUS WP_002851541 740 aa linear BCT 05-JAN-2024
DEFINITION family 43 glycosylhydrolase [Ruminococcus albus].
ACCESSION WP_002851541
VERSION WP_002851541.1
KEYWORDS RefSeq.
SOURCE Ruminococcus albus
ORGANISM Ruminococcus albus
Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae;
Ruminococcus.
REFERENCE 1 (residues 1 to 740)
AUTHORS Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
TITLE Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
beta-propeller fold
JOURNAL Nat Struct Biol 9 (9), 665-668 (2002)
PUBMED 12198486
COMMENT REFSEQ: This record represents a single, non-redundant, protein
sequence which may be annotated on many different RefSeq genomes
from the same, or different, species.
##Evidence-For-Name-Assignment-START##
Evidence Category :: HMM
Evidence Accession :: NF016497.4
Evidence Source :: EMBL-EBI
Source Identifier :: PF04616.18
##Evidence-For-Name-Assignment-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..740
/organism="Ruminococcus albus"
/db_xref="taxon:1264"
Protein 1..740
/product="family 43 glycosylhydrolase"
/GO_function="GO:0004553 - hydrolase activity, hydrolyzing
O-glycosyl compounds [Evidence IEA]"
/GO_process="GO:0005975 - carbohydrate metabolic process
[Evidence IEA]"
/calculated_mol_wt=80764
Region 42..176
/region_name="CBM_4_9"
/note="Carbohydrate binding domain; pfam02018"
/db_xref="CDD:396553"
Region 206..261
/region_name="Dockerin_I"
/note="Type I dockerin repeat domain; cd14256"
/db_xref="CDD:271215"
Site order(216..218,220..222,224..225,228,257,260..261)
/site_type="other"
/note="cohesin binding interface 2 [polypeptide binding]"
/db_xref="CDD:271215"
Site order(224,227,249..251,253..254,258)
/site_type="other"
/note="cohesin binding interface 1 [polypeptide binding]"
/db_xref="CDD:271215"
Region 299..611
/region_name="GH43_XynD-like"
/note="Glycosyl hydrolase family 43 protein such as
Bacillus subtilis arabinoxylan arabinofuranohydrolase
(XynD;BsAXH-m23;BSU18160); cd09003"
/db_xref="CDD:350117"
Site order(379,440,496..497,560..561)
/site_type="other"
/note="chemical substrate binding site [chemical binding]"
/db_xref="CDD:350117"
Region 628..739
/region_name="CBM6_xylanase-like"
/note="Carbohydrate Binding Module 6 (CBM6); many are
appended to glycoside hydrolase (GH) family 11 and GH43
xylanase domains; cd04084"
/db_xref="CDD:271150"
ORIGIN
1 mknrsgakkl ttavlagtml faqsafmsda svkadaassd giyfhdnfed ssgnweargd
61 geillsgrhp fkgtnallvk drtkawqgiq maldpsifqa gqsysfnvfv dyedgddtey
121 flfsmqytdg sgttkylhia egstsrgkyl qlsnpsfrip sdasdvyiyv etsevtgnfy
181 ideaiiaqdg vkigsdgvse yktdhrgdid ldgkvniydl vlakrgmmsg fenelsrkaa
241 didgsgevdn edistlqdfv lrkidkfpei kikvdftema nkfgnvnlaa sykksnehnp
301 lisqyfgadp gvmeyngrvy ifmtddhlly kngqltdiey gsinclrcis sddlvnwtdh
361 glikaagqng lckwggnswa ptachkking kekfflyfan ggngiavlea dsptgpwrdp
421 igkalisrst pncgnvewlf dpavlvdddg tgylyfgggv psgqnshpkt arcvklsddm
481 tsivgtpqti dapylfedsg ihkfngkyyy sycsnfntyg nqygmtsgai nymvsdsplg
541 pftykgeafk gistffgtgg nnhhtffkfn nqwyltyhaq ylqdsmglkg gyrsthidkv
601 ninsdgtiqa vtgtksgvsq iksfdpyrtn raatfshqgg itisgsgnsv vqankgswfr
661 vsgvdcgyna qemtikassp ngcivkvctg sangtpvaya eipagssmqe ftvpvkdlsg
721 kndlyfvfnn tvsvdswsls
//