GenomeNet

Database: RefSeq
Entry: WP_002851541
LinkDB: WP_002851541
Original site: WP_002851541 
LOCUS       WP_002851541             740 aa            linear   BCT 05-JAN-2024
DEFINITION  family 43 glycosylhydrolase [Ruminococcus albus].
ACCESSION   WP_002851541
VERSION     WP_002851541.1
KEYWORDS    RefSeq.
SOURCE      Ruminococcus albus
  ORGANISM  Ruminococcus albus
            Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae;
            Ruminococcus.
REFERENCE   1  (residues 1 to 740)
  AUTHORS   Nurizzo,D., Turkenburg,J.P., Charnock,S.J., Roberts,S.M.,
            Dodson,E.J., McKie,V.A., Taylor,E.J., Gilbert,H.J. and Davies,G.J.
  TITLE     Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade
            beta-propeller fold
  JOURNAL   Nat Struct Biol 9 (9), 665-668 (2002)
   PUBMED   12198486
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: NF016497.4
            Evidence Source    :: EMBL-EBI
            Source Identifier  :: PF04616.18
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Ruminococcus albus"
                     /db_xref="taxon:1264"
     Protein         1..740
                     /product="family 43 glycosylhydrolase"
                     /GO_function="GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /GO_process="GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /calculated_mol_wt=80764
     Region          42..176
                     /region_name="CBM_4_9"
                     /note="Carbohydrate binding domain; pfam02018"
                     /db_xref="CDD:396553"
     Region          206..261
                     /region_name="Dockerin_I"
                     /note="Type I dockerin repeat domain; cd14256"
                     /db_xref="CDD:271215"
     Site            order(216..218,220..222,224..225,228,257,260..261)
                     /site_type="other"
                     /note="cohesin binding interface 2 [polypeptide binding]"
                     /db_xref="CDD:271215"
     Site            order(224,227,249..251,253..254,258)
                     /site_type="other"
                     /note="cohesin binding interface 1 [polypeptide binding]"
                     /db_xref="CDD:271215"
     Region          299..611
                     /region_name="GH43_XynD-like"
                     /note="Glycosyl hydrolase family 43 protein such as
                     Bacillus subtilis arabinoxylan arabinofuranohydrolase
                     (XynD;BsAXH-m23;BSU18160); cd09003"
                     /db_xref="CDD:350117"
     Site            order(379,440,496..497,560..561)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:350117"
     Region          628..739
                     /region_name="CBM6_xylanase-like"
                     /note="Carbohydrate Binding Module 6 (CBM6); many are
                     appended to glycoside hydrolase (GH) family 11 and GH43
                     xylanase domains; cd04084"
                     /db_xref="CDD:271150"
ORIGIN      
        1 mknrsgakkl ttavlagtml faqsafmsda svkadaassd giyfhdnfed ssgnweargd
       61 geillsgrhp fkgtnallvk drtkawqgiq maldpsifqa gqsysfnvfv dyedgddtey
      121 flfsmqytdg sgttkylhia egstsrgkyl qlsnpsfrip sdasdvyiyv etsevtgnfy
      181 ideaiiaqdg vkigsdgvse yktdhrgdid ldgkvniydl vlakrgmmsg fenelsrkaa
      241 didgsgevdn edistlqdfv lrkidkfpei kikvdftema nkfgnvnlaa sykksnehnp
      301 lisqyfgadp gvmeyngrvy ifmtddhlly kngqltdiey gsinclrcis sddlvnwtdh
      361 glikaagqng lckwggnswa ptachkking kekfflyfan ggngiavlea dsptgpwrdp
      421 igkalisrst pncgnvewlf dpavlvdddg tgylyfgggv psgqnshpkt arcvklsddm
      481 tsivgtpqti dapylfedsg ihkfngkyyy sycsnfntyg nqygmtsgai nymvsdsplg
      541 pftykgeafk gistffgtgg nnhhtffkfn nqwyltyhaq ylqdsmglkg gyrsthidkv
      601 ninsdgtiqa vtgtksgvsq iksfdpyrtn raatfshqgg itisgsgnsv vqankgswfr
      661 vsgvdcgyna qemtikassp ngcivkvctg sangtpvaya eipagssmqe ftvpvkdlsg
      721 kndlyfvfnn tvsvdswsls
//
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