LOCUS WP_013399386 907 aa linear BCT 29-MAR-2023
DEFINITION sialidase family protein [Gardnerella vaginalis].
ACCESSION WP_013399386
VERSION WP_013399386.1
KEYWORDS RefSeq.
SOURCE Gardnerella vaginalis
ORGANISM Gardnerella vaginalis
Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
Bifidobacteriaceae; Gardnerella.
REFERENCE 1 (residues 1 to 907)
AUTHORS Taylor,G.
TITLE Sialidases: structures, biological significance and therapeutic
potential
JOURNAL Curr Opin Struct Biol 6 (6), 830-837 (1996)
PUBMED 8994884
REFERENCE 2 (residues 1 to 907)
AUTHORS Roggentin,P., Schauer,R., Hoyer,L.L. and Vimr,E.R.
TITLE The sialidase superfamily and its spread by horizontal gene
transfer
JOURNAL Mol Microbiol 9 (5), 915-921 (1993)
PUBMED 7934919
COMMENT REFSEQ: This record represents a single, non-redundant, protein
sequence which may be annotated on many different RefSeq genomes
from the same, or different, species.
##Evidence-For-Name-Assignment-START##
Evidence Category :: Conserved Domain (CDD)
Evidence Accession :: Domain architecture ID 10202570
Evidence Source :: NCBI SPARCLE
##Evidence-For-Name-Assignment-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..907
/organism="Gardnerella vaginalis"
/db_xref="taxon:2702"
Protein 1..907
/product="sialidase family protein"
/EC_number="3.2.1.-"
/calculated_mol_wt=99625
Region 391..844
/region_name="Sialidase_non-viral"
/note="Non-viral sialidases; cd15482"
/db_xref="CDD:271234"
Region 404..456
/region_name="Sialidase propeller 1"
/note="Sialidase propeller 1 [structural motif]"
/db_xref="CDD:271234"
Site order(405,430,713,729,793,821,837)
/site_type="active"
/note="catalytic site [active]"
/db_xref="CDD:271234"
Region 470..622
/region_name="Sialidase propeller 2"
/note="Sialidase propeller 2 [structural motif]"
/db_xref="CDD:271234"
Region 633..687
/region_name="Sialidase propeller 3"
/note="Sialidase propeller 3 [structural motif]"
/db_xref="CDD:271234"
Region 712..752
/region_name="Sialidase propeller 4"
/note="Sialidase propeller 4 [structural motif]"
/db_xref="CDD:271234"
Region 762..814
/region_name="Sialidase propeller 5"
/note="Sialidase propeller 5 [structural motif]"
/db_xref="CDD:271234"
ORIGIN
1 merrstktts liediadikg sehtrfnhat ikitpsseik kysenesgin rkdkneeinq
61 negiigfkfv ansdcdlldi kpaqkseasa qqehttpiik isikedapll saqnlledsa
121 dangakeial qmedalgacd grehdfaity gsfgsrfyld gyqcfasatn lgpqrvsgka
181 aevcaaqaes sqiydfyyss hlpnpeeian satqaqpdiw fagpticard ikrvscnssg
241 tlhiqfrlrg pgqhgvlfaa gtvgtktnle ssekisvyag pegikitlid setciksvie
301 aaasvddgew hdliiranrg aidiyvdgys eshnigqfwf anipelnavs igedlrgvrl
361 mgeartggiy fsaltegqiq risrvkplvt talfdtgyag srsyripslv ktrmgtliag
421 adqrtsvsnd apnhinfvir rstdggktwk plqtvinmpg knlgklgasa idscpildpa
481 gkserinvli dlnpsgiglt ncktdvgvde cgrikmedrf grhyaalmdg saavklpcds
541 sekecatkwl vfpdgsiknc dshndlrnns hsnqtcdsst wniwksqeia sesqplfaek
601 tcyiaqiysd ddgktwsatr lidhmvkepw msfagvcpgn givirqsekh ygrilvpfyc
661 sgkskshyss galisdddgk twsrgkmine grlingkivd patmqdddat ssetvfverk
721 ngdilaffrn qnrsgcvgka ishdcgetws elifdtslpe ifsqpsatcf nsenadnadc
781 iafanasqmm pyrgrgvvrf sydggktwak svcinpfhhv yqclsssnkr tlqllweret
841 tgiyitaids nlwkqdnlqi dfksnaksln ntdldciknk intsekmkdl eegsltrter
901 sqhgrdi
//