GenomeNet

Database: RefSeq
Entry: WP_068402816
LinkDB: WP_068402816
Original site: WP_068402816 
LOCUS       WP_068402816             882 aa            linear   BCT 15-MAR-2021
DEFINITION  DNA ligase D [Pedobacter cryoconitis].
ACCESSION   WP_068402816
VERSION     WP_068402816.1
KEYWORDS    RefSeq.
SOURCE      Pedobacter cryoconitis
  ORGANISM  Pedobacter cryoconitis
            Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
            Sphingobacteriaceae; Pedobacter.
REFERENCE   1  (residues 1 to 882)
  AUTHORS   Zhu,H., Wang,L.K. and Shuman,S.
  TITLE     Essential constituents of the 3'-phosphoesterase domain of
            bacterial DNA ligase D, a nonhomologous end-joining enzyme
  JOURNAL   J Biol Chem 280 (40), 33707-33715 (2005)
   PUBMED   16046407
COMMENT     REFSEQ: This record represents a single, non-redundant, protein
            sequence which may be annotated on many different RefSeq genomes
            from the same, or different, species.
            
            ##Evidence-For-Name-Assignment-START##
            Evidence Category  :: HMM
            Evidence Accession :: TIGR02776.1
            Evidence Source    :: JCVI
            ##Evidence-For-Name-Assignment-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Pedobacter cryoconitis"
                     /db_xref="taxon:188932"
     gene            1..882
                     /gene="ligD"
     Protein         1..882
                     /product="DNA ligase D"
                     /EC_number="6.5.1.1"
                     /GO_process="GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /calculated_mol_wt=99381
     Region          2..860
                     /region_name="Adenylation_DNA_ligase_like"
                     /note="Adenylation domain of proteins similar to
                     ATP-dependent polynucleotide ligases; cl12015"
                     /db_xref="CDD:448381"
ORIGIN      
        1 msltaykkkr sfaqtpepkg gkgsgkelrf viqkhdashl hydfrlemgg vlkswavpkg
       61 pstdpevkrl ammvedhpyd ykdfeglipk geygggtviv wdegtyepde pvdgtiedqd
      121 rnlrhqlhsg kisftlhgkk lkgsfalvrt hgmgenswll ikhkdkyaks ddillkdksv
      181 iskktieqma kkpvqvygkk tikpkqpdav kpeaeavksk laeavkpkqn kivktpfydq
      241 vkpmlatlvd eafdkegwly evkwdgyrav almnkgsvef ksrnnksfqe kfypiyqall
      301 ewnvnaivdg evvsvdkkgk asfgdlqnwh sdqngellyy vfdilwydgh dltvlslmqr
      361 kailaqlipe nspvrlskgf etsgieflaa akkaglegim akrkdslyva gertndwlki
      421 kaskrqevvi ggytknagts kpfssllvgl feggkfiytg kigtgfsmem qqellarfep
      481 lliaepafte kpaynkanpf raglgkakaf wlkpemicev nfaemttdgv mrhpsfagmr
      541 edkdakevvl ekeadtsail agtdddltkl ngmkqllnpk eetqvkkvng hsleftnlnk
      601 ifwpveqftk rdlinyyeqm ssfilpymkd rplslnrypn gitgesfyqk dvtgkvpdwv
      661 ktylyhaegd dsdkhfmlge dkatllysag lgcievhpws stikkpdypt wciidldpdk
      721 nsfqqvieaa qvtkavlddm gvpcycktsg stglhvyipl gnkytyeqsk efariivtlv
      781 nreipaytsl eravskrkgk myldflqnrp qatiaapysl rpkpgatvsm plhwdevkkg
      841 lemkdftisn alsrvketgd ifkpvlgkgi dlkkiikgrq lk
//
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