LOCUS WP_068402816 882 aa linear BCT 15-MAR-2021
DEFINITION DNA ligase D [Pedobacter cryoconitis].
ACCESSION WP_068402816
VERSION WP_068402816.1
KEYWORDS RefSeq.
SOURCE Pedobacter cryoconitis
ORGANISM Pedobacter cryoconitis
Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
Sphingobacteriaceae; Pedobacter.
REFERENCE 1 (residues 1 to 882)
AUTHORS Zhu,H., Wang,L.K. and Shuman,S.
TITLE Essential constituents of the 3'-phosphoesterase domain of
bacterial DNA ligase D, a nonhomologous end-joining enzyme
JOURNAL J Biol Chem 280 (40), 33707-33715 (2005)
PUBMED 16046407
COMMENT REFSEQ: This record represents a single, non-redundant, protein
sequence which may be annotated on many different RefSeq genomes
from the same, or different, species.
##Evidence-For-Name-Assignment-START##
Evidence Category :: HMM
Evidence Accession :: TIGR02776.1
Evidence Source :: JCVI
##Evidence-For-Name-Assignment-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..882
/organism="Pedobacter cryoconitis"
/db_xref="taxon:188932"
gene 1..882
/gene="ligD"
Protein 1..882
/product="DNA ligase D"
/EC_number="6.5.1.1"
/GO_process="GO:0006303 - double-strand break repair via
nonhomologous end joining [Evidence IEA]"
/calculated_mol_wt=99381
Region 2..860
/region_name="Adenylation_DNA_ligase_like"
/note="Adenylation domain of proteins similar to
ATP-dependent polynucleotide ligases; cl12015"
/db_xref="CDD:448381"
ORIGIN
1 msltaykkkr sfaqtpepkg gkgsgkelrf viqkhdashl hydfrlemgg vlkswavpkg
61 pstdpevkrl ammvedhpyd ykdfeglipk geygggtviv wdegtyepde pvdgtiedqd
121 rnlrhqlhsg kisftlhgkk lkgsfalvrt hgmgenswll ikhkdkyaks ddillkdksv
181 iskktieqma kkpvqvygkk tikpkqpdav kpeaeavksk laeavkpkqn kivktpfydq
241 vkpmlatlvd eafdkegwly evkwdgyrav almnkgsvef ksrnnksfqe kfypiyqall
301 ewnvnaivdg evvsvdkkgk asfgdlqnwh sdqngellyy vfdilwydgh dltvlslmqr
361 kailaqlipe nspvrlskgf etsgieflaa akkaglegim akrkdslyva gertndwlki
421 kaskrqevvi ggytknagts kpfssllvgl feggkfiytg kigtgfsmem qqellarfep
481 lliaepafte kpaynkanpf raglgkakaf wlkpemicev nfaemttdgv mrhpsfagmr
541 edkdakevvl ekeadtsail agtdddltkl ngmkqllnpk eetqvkkvng hsleftnlnk
601 ifwpveqftk rdlinyyeqm ssfilpymkd rplslnrypn gitgesfyqk dvtgkvpdwv
661 ktylyhaegd dsdkhfmlge dkatllysag lgcievhpws stikkpdypt wciidldpdk
721 nsfqqvieaa qvtkavlddm gvpcycktsg stglhvyipl gnkytyeqsk efariivtlv
781 nreipaytsl eravskrkgk myldflqnrp qatiaapysl rpkpgatvsm plhwdevkkg
841 lemkdftisn alsrvketgd ifkpvlgkgi dlkkiikgrq lk
//