GenomeNet

Database: RefSeq
Entry: XP_001873936
LinkDB: XP_001873936
Original site: XP_001873936 
LOCUS       XP_001873936             387 aa            linear   PLN 03-APR-2008
DEFINITION  predicted protein [Laccaria bicolor S238N-H82].
ACCESSION   XP_001873936
VERSION     XP_001873936.1
DBSOURCE    REFSEQ: accession XM_001873901.1
KEYWORDS    RefSeq.
SOURCE      Laccaria bicolor S238N-H82
  ORGANISM  Laccaria bicolor S238N-H82
            Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina;
            Agaricomycetes; Agaricomycetidae; Agaricales; Tricholomataceae;
            Laccaria.
REFERENCE   1  (residues 1 to 387)
  AUTHORS   Martin,F., Aerts,A., Ahren,D., Brun,A., Danchin,E.G.,
            Duchaussoy,F., Gibon,J., Kohler,A., Lindquist,E., Pereda,V.,
            Salamov,A., Shapiro,H.J., Wuyts,J., Blaudez,D., Buee,M.,
            Brokstein,P., Canback,B., Cohen,D., Courty,P.E., Coutinho,P.M.,
            Delaruelle,C., Detter,J.C., Deveau,A., DiFazio,S., Duplessis,S.,
            Fraissinet-Tachet,L., Lucic,E., Frey-Klett,P., Fourrey,C.,
            Feussner,I., Gay,G., Grimwood,J., Hoegger,P.J., Jain,P., Kilaru,S.,
            Labbe,J., Lin,Y.C., Legue,V., Le Tacon,F., Marmeisse,R.,
            Melayah,D., Montanini,B., Muratet,M., Nehls,U., Niculita-Hirzel,H.,
            Oudot-Le Secq,M.P., Peter,M., Quesneville,H., Rajashekar,B.,
            Reich,M., Rouhier,N., Schmutz,J., Yin,T., Chalot,M., Henrissat,B.,
            Kues,U., Lucas,S., Van de Peer,Y., Podila,G.K., Polle,A.,
            Pukkila,P.J., Richardson,P.M., Rouze,P., Sanders,I.R.,
            Stajich,J.E., Tunlid,A., Tuskan,G. and Grigoriev,I.V.
  TITLE     The genome of Laccaria bicolor provides insights into mycorrhizal
            symbiosis
  JOURNAL   Nature 452 (7183), 88-92 (2008)
   PUBMED   18322534
REFERENCE   2  (residues 1 to 387)
  AUTHORS   Zhou,K., Detter,J.C., Glavina del Rio,T., Dahlen,E., Tice,H.,
            Pitluck,S., Aerts,A., Salamov,A., Shapiro,H.J., Lindquist,E.,
            Lucas,S., Richardson,P.M., Ahren,D., Blaudez,D., Brun,A., Buee,M.,
            Chalot,M., Courty,P., Coutinho,P.M., Deveau,A., Duplessis,S.,
            Duchaussoy,F., Fourrey,C., Fraissinet-Tachet,L., Henrissat,B.,
            Gay,G., Gibon,J., Hoegger,P., Kohler,A., Kues,U., Labbe,J.,
            Muratet,M., Marmeisse,R., Melayah,D., Montanini,B., Napoli,C.,
            Podila,G., Reich,M., Rouhier,N., Rouze,P., Wuyts,J., Martin,F. and
            Grigoriev,I.V.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2007) US DOE Joint Genome Institute, 2800
            Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from EDR15728.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Laccaria bicolor S238N-H82"
                     /strain="S238N-H82"
                     /db_xref="taxon:486041"
     Protein         1..387
                     /product="hypothetical protein"
                     /calculated_mol_wt=43180
     Region          14..363
                     /region_name="Rbg1"
                     /note="Ribosome-interacting GTPase 1 [Translation,
                     ribosomal structure and biogenesis]; COG1163"
                     /db_xref="CDD:224085"
     Region          63..295
                     /region_name="DRG"
                     /note="Developmentally Regulated GTP-binding protein
                     (DRG); cd01896"
                     /db_xref="CDD:206683"
     Site            69..76
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206683"
     Site            order(72,74..77,171..172,174,199..201)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206683"
     Site            91..99
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206683"
     Site            96
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206683"
     Site            order(114..123,126..139)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206683"
     Site            115..118
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206683"
     Site            246..249
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206683"
     Site            269..271
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206683"
     Region          289..362
                     /region_name="TGS_DRG_C"
                     /note="TGS_DRG_C: DRG (developmentally regulated
                     GTP-binding protein) represents a family of GTP-binding
                     proteins that includes two members, DRG1 and DRG2. DRG1
                     and DRG2 have a C-terminal TGS domain (named after the
                     ThrRS, GTPase, and SpoT proteins where it...; cd01666"
                     /db_xref="CDD:133436"
     CDS             1..387
                     /locus_tag="LACBIDRAFT_187186"
                     /coded_by="XM_001873901.1:1..1164"
                     /db_xref="InterPro:IPR004095"
                     /db_xref="InterPro:IPR006169"
                     /db_xref="GeneID:6069975"
ORIGIN      
        1 mgvvekikei eeemartqkn kateyhlgll kaklaryraq llepttksgp agtgfdvqks
       61 gdarvaligf psvgkstlls ktthtaseaa ayefttltai pgvieykgar iqlldlpgiv
      121 egasqgrgrg rqvvstakta dlilimldat kseeqrrlle feldavgirl nktkpdivfk
      181 krttggitfn ttvkltrtde ktirtilagy klhncdvmir edittdefid vligtrkyip
      241 clyvynkids islelmdklg rqpntvvisc emdlnltyli driwddlrlv kiytkkrgdh
      301 pdlsdpiclr kgatiedvcn gihrslapnf ryglvwcgks skfsphaqkv slahqvqded
      361 vvssafhgfh kmrfltyntl kslpsdw
//
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