GenomeNet

Database: RefSeq
Entry: XP_001878222
LinkDB: XP_001878222
Original site: XP_001878222 
LOCUS       XP_001878222             537 aa            linear   PLN 13-NOV-2023
DEFINITION  glutamate decarboxylase [Laccaria bicolor S238N-H82].
ACCESSION   XP_001878222
VERSION     XP_001878222.1
DBLINK      BioProject: PRJNA29019
            BioSample: SAMN02769624
DBSOURCE    REFSEQ: accession XM_001878187.1
KEYWORDS    RefSeq.
SOURCE      Laccaria bicolor S238N-H82
  ORGANISM  Laccaria bicolor S238N-H82
            Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina;
            Agaricomycetes; Agaricomycetidae; Agaricales; Agaricineae;
            Hydnangiaceae; Laccaria.
REFERENCE   1  (residues 1 to 537)
  AUTHORS   Martin,F., Aerts,A., Ahren,D., Brun,A., Danchin,E.G.,
            Duchaussoy,F., Gibon,J., Kohler,A., Lindquist,E., Pereda,V.,
            Salamov,A., Shapiro,H.J., Wuyts,J., Blaudez,D., Buee,M.,
            Brokstein,P., Canback,B., Cohen,D., Courty,P.E., Coutinho,P.M.,
            Delaruelle,C., Detter,J.C., Deveau,A., DiFazio,S., Duplessis,S.,
            Fraissinet-Tachet,L., Lucic,E., Frey-Klett,P., Fourrey,C.,
            Feussner,I., Gay,G., Grimwood,J., Hoegger,P.J., Jain,P., Kilaru,S.,
            Labbe,J., Lin,Y.C., Legue,V., Le Tacon,F., Marmeisse,R.,
            Melayah,D., Montanini,B., Muratet,M., Nehls,U., Niculita-Hirzel,H.,
            Oudot-Le Secq,M.P., Peter,M., Quesneville,H., Rajashekar,B.,
            Reich,M., Rouhier,N., Schmutz,J., Yin,T., Chalot,M., Henrissat,B.,
            Kues,U., Lucas,S., Van de Peer,Y., Podila,G.K., Polle,A.,
            Pukkila,P.J., Richardson,P.M., Rouze,P., Sanders,I.R.,
            Stajich,J.E., Tunlid,A., Tuskan,G. and Grigoriev,I.V.
  TITLE     The genome of Laccaria bicolor provides insights into mycorrhizal
            symbiosis
  JOURNAL   Nature 452 (7183), 88-92 (2008)
   PUBMED   18322534
REFERENCE   2  (residues 1 to 537)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-NOV-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 537)
  AUTHORS   Zhou,K., Detter,J.C., Glavina del Rio,T., Dahlen,E., Tice,H.,
            Pitluck,S., Aerts,A., Salamov,A., Shapiro,H.J., Lindquist,E.,
            Lucas,S., Richardson,P.M., Ahren,D., Blaudez,D., Brun,A., Buee,M.,
            Chalot,M., Courty,P., Coutinho,P.M., Deveau,A., Duplessis,S.,
            Duchaussoy,F., Fourrey,C., Fraissinet-Tachet,L., Henrissat,B.,
            Gay,G., Gibon,J., Hoegger,P., Kohler,A., Kues,U., Labbe,J.,
            Muratet,M., Marmeisse,R., Melayah,D., Montanini,B., Napoli,C.,
            Podila,G., Reich,M., Rouhier,N., Rouze,P., Wuyts,J., Martin,F. and
            Grigoriev,I.V.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2007) US DOE Joint Genome Institute, 2800
            Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to EDR10921.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Laccaria bicolor S238N-H82"
                     /strain="S238N-H82"
                     /db_xref="taxon:486041"
                     /chromosome="Unknown"
     Protein         1..537
                     /product="glutamate decarboxylase"
                     /EC_number="4.1.1.15"
                     /calculated_mol_wt=59323
     Region          38..492
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(144..145,148,230,265,268,295,298)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99742"
     Site            298
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99742"
     CDS             1..537
                     /locus_tag="LACBIDRAFT_315921"
                     /coded_by="XM_001878187.1:1..1614"
                     /note="Putative Glutamate decarboxylase. L-glutamate =
                     4-aminobutanoate + CO(2)."
                     /db_xref="GeneID:6073940"
                     /db_xref="InterPro:IPR002129"
ORIGIN      
        1 malskhvnad hliqkshdkh athgefaaeq aqeatysygs rygtnpvpky risskgvsad
       61 aayqiihdel sldgstvlnl asfvhtwmpp qadklvheni tknlidtdey patqiihtrc
      121 isiladvwha psskqaigta ttgsseaiql gglamkkiwq akrkaagksi hepgpnivmg
      181 anaqvalekf aryfdvecrl vpisvqskyr ldpkeaikyv dentigvfvi lgstytghye
      241 pvkeisdlld eyeaktgnsv pihvdaasgg fiapfahpkl lwdfklprvv sintsghkfg
      301 lsyvgvgwvv wrdkahlpkd lifelhylgs veysfslnfs rpaapiiaqy fnllhlgfeg
      361 yrevalddlk narllsrale ntgyytvlsd vhrsvgavgg kgidthdvea yepglpvvaf
      421 rfsdefqqkn peveqkwiqt llrakgwivp nyelapdlqq vqilrvvire nvtevlldkl
      481 iadiveitee laskasseha lnvlgqmhga rkkhehktst fdagegseas gtyarsc
//
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