LOCUS XP_001878222 537 aa linear PLN 13-NOV-2023
DEFINITION glutamate decarboxylase [Laccaria bicolor S238N-H82].
ACCESSION XP_001878222
VERSION XP_001878222.1
DBLINK BioProject: PRJNA29019
BioSample: SAMN02769624
DBSOURCE REFSEQ: accession XM_001878187.1
KEYWORDS RefSeq.
SOURCE Laccaria bicolor S238N-H82
ORGANISM Laccaria bicolor S238N-H82
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina;
Agaricomycetes; Agaricomycetidae; Agaricales; Agaricineae;
Hydnangiaceae; Laccaria.
REFERENCE 1 (residues 1 to 537)
AUTHORS Martin,F., Aerts,A., Ahren,D., Brun,A., Danchin,E.G.,
Duchaussoy,F., Gibon,J., Kohler,A., Lindquist,E., Pereda,V.,
Salamov,A., Shapiro,H.J., Wuyts,J., Blaudez,D., Buee,M.,
Brokstein,P., Canback,B., Cohen,D., Courty,P.E., Coutinho,P.M.,
Delaruelle,C., Detter,J.C., Deveau,A., DiFazio,S., Duplessis,S.,
Fraissinet-Tachet,L., Lucic,E., Frey-Klett,P., Fourrey,C.,
Feussner,I., Gay,G., Grimwood,J., Hoegger,P.J., Jain,P., Kilaru,S.,
Labbe,J., Lin,Y.C., Legue,V., Le Tacon,F., Marmeisse,R.,
Melayah,D., Montanini,B., Muratet,M., Nehls,U., Niculita-Hirzel,H.,
Oudot-Le Secq,M.P., Peter,M., Quesneville,H., Rajashekar,B.,
Reich,M., Rouhier,N., Schmutz,J., Yin,T., Chalot,M., Henrissat,B.,
Kues,U., Lucas,S., Van de Peer,Y., Podila,G.K., Polle,A.,
Pukkila,P.J., Richardson,P.M., Rouze,P., Sanders,I.R.,
Stajich,J.E., Tunlid,A., Tuskan,G. and Grigoriev,I.V.
TITLE The genome of Laccaria bicolor provides insights into mycorrhizal
symbiosis
JOURNAL Nature 452 (7183), 88-92 (2008)
PUBMED 18322534
REFERENCE 2 (residues 1 to 537)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (12-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 537)
AUTHORS Zhou,K., Detter,J.C., Glavina del Rio,T., Dahlen,E., Tice,H.,
Pitluck,S., Aerts,A., Salamov,A., Shapiro,H.J., Lindquist,E.,
Lucas,S., Richardson,P.M., Ahren,D., Blaudez,D., Brun,A., Buee,M.,
Chalot,M., Courty,P., Coutinho,P.M., Deveau,A., Duplessis,S.,
Duchaussoy,F., Fourrey,C., Fraissinet-Tachet,L., Henrissat,B.,
Gay,G., Gibon,J., Hoegger,P., Kohler,A., Kues,U., Labbe,J.,
Muratet,M., Marmeisse,R., Melayah,D., Montanini,B., Napoli,C.,
Podila,G., Reich,M., Rouhier,N., Rouze,P., Wuyts,J., Martin,F. and
Grigoriev,I.V.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (19-NOV-2007) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to EDR10921.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..537
/organism="Laccaria bicolor S238N-H82"
/strain="S238N-H82"
/db_xref="taxon:486041"
/chromosome="Unknown"
Protein 1..537
/product="glutamate decarboxylase"
/EC_number="4.1.1.15"
/calculated_mol_wt=59323
Region 38..492
/region_name="AAT_I"
/note="Aspartate aminotransferase (AAT) superfamily (fold
type I) of pyridoxal phosphate (PLP)-dependent enzymes.
PLP combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine intermediate, which
depending on the reaction, is the...; cl18945"
/db_xref="CDD:450240"
Site order(144..145,148,230,265,268,295,298)
/site_type="other"
/note="pyridoxal 5'-phosphate binding pocket [chemical
binding]"
/db_xref="CDD:99742"
Site 298
/site_type="active"
/note="catalytic residue [active]"
/db_xref="CDD:99742"
CDS 1..537
/locus_tag="LACBIDRAFT_315921"
/coded_by="XM_001878187.1:1..1614"
/note="Putative Glutamate decarboxylase. L-glutamate =
4-aminobutanoate + CO(2)."
/db_xref="GeneID:6073940"
/db_xref="InterPro:IPR002129"
ORIGIN
1 malskhvnad hliqkshdkh athgefaaeq aqeatysygs rygtnpvpky risskgvsad
61 aayqiihdel sldgstvlnl asfvhtwmpp qadklvheni tknlidtdey patqiihtrc
121 isiladvwha psskqaigta ttgsseaiql gglamkkiwq akrkaagksi hepgpnivmg
181 anaqvalekf aryfdvecrl vpisvqskyr ldpkeaikyv dentigvfvi lgstytghye
241 pvkeisdlld eyeaktgnsv pihvdaasgg fiapfahpkl lwdfklprvv sintsghkfg
301 lsyvgvgwvv wrdkahlpkd lifelhylgs veysfslnfs rpaapiiaqy fnllhlgfeg
361 yrevalddlk narllsrale ntgyytvlsd vhrsvgavgg kgidthdvea yepglpvvaf
421 rfsdefqqkn peveqkwiqt llrakgwivp nyelapdlqq vqilrvvire nvtevlldkl
481 iadiveitee laskasseha lnvlgqmhga rkkhehktst fdagegseas gtyarsc
//