LOCUS XP_002947019 709 aa linear PLN 09-JAN-2024
DEFINITION uncharacterized protein VOLCADRAFT_116283 [Volvox carteri f.
nagariensis].
ACCESSION XP_002947019
VERSION XP_002947019.1
DBLINK BioProject: PRJNA50441
BioSample: SAMN02953753
DBSOURCE REFSEQ: accession XM_002946973.1
KEYWORDS RefSeq.
SOURCE Volvox carteri f. nagariensis
ORGANISM Volvox carteri f. nagariensis
Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes;
Chlorophyceae; CS clade; Chlamydomonadales; Volvocaceae; Volvox.
REFERENCE 1 (residues 1 to 709)
AUTHORS Prochnik,S.E., Umen,J., Nedelcu,A.M., Hallmann,A., Miller,S.M.,
Nishii,I., Ferris,P., Kuo,A., Mitros,T., Fritz-Laylin,L.K.,
Hellsten,U., Chapman,J., Simakov,O., Rensing,S.A., Terry,A.,
Pangilinan,J., Kapitonov,V., Jurka,J., Salamov,A., Shapiro,H.,
Schmutz,J., Grimwood,J., Lindquist,E., Lucas,S., Grigoriev,I.V.,
Schmitt,R., Kirk,D. and Rokhsar,D.S.
TITLE Genomic analysis of organismal complexity in the multicellular
green alga Volvox carteri
JOURNAL Science 329 (5988), 223-226 (2010)
PUBMED 20616280
REFERENCE 2 (residues 1 to 709)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (06-JAN-2024) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 709)
AUTHORS Kuo,A., Prochnik,S.E., Terry,A., Salamov,A., Pangilinan,J.,
Shapiro,H., Schmutz,J., Grimwood,J., Lindquist,E., Pitluck,S.,
Lucas,S., Umen,J., Nedelcu,A., Hallmann,A., Miller,S., Nishii,I.,
Ferris,P., Mitros,T., Fritz-Laylin,L.K., Hellsten,U., Chapman,J.,
Simakov,O., Rensing,S.A., Kapitonov,V., Jurka,J., Schmitt,R.,
Kirk,D., Rokhsar,D.S. and Grigoriev,I.V.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2010) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to EFJ52245.
##Metadata-START##
Organism Display Name :: Volvox carteri f. nagariensis Eve
GOLD Stamp ID :: Gi00776
Cell Shape :: Sphere-shaped
Diseases :: None
Phenotypes :: Multicellular
##Metadata-END##
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..709
/organism="Volvox carteri f. nagariensis"
/strain="Eve"
/db_xref="taxon:3068"
/chromosome="Unknown"
/forma="nagariensis"
Protein 1..709
/product="uncharacterized protein"
/calculated_mol_wt=78407
Region 73..200
/region_name="Ion_trans_2"
/note="Ion channel; cl21560"
/db_xref="CDD:451311"
Region 207..362
/region_name="IRK_C"
/note="Inward rectifier potassium channel C-terminal
domain; pfam17655"
/db_xref="CDD:435949"
Region 400..575
/region_name="IRK_C"
/note="Inward rectifier potassium channel C-terminal
domain; pfam17655"
/db_xref="CDD:435949"
CDS 1..709
/locus_tag="VOLCADRAFT_116283"
/coded_by="XM_002946973.1:1..2130"
/note="predicted protein"
/db_xref="GeneID:9618383"
/db_xref="InterPro:IPR001838"
/db_xref="JGIDB:Volca1_116283"
ORIGIN
1 mqslhewlla dpatrgyile rqqdqsldne erevirrrmr tgkwtldrga gyyaterqkr
61 klsclvqtgk hagrsrvryv gidfqtfwth ilkrdfytta vnaklvqlvt vlvvwyfsml
121 liwstiyylv wrlektcfvg fhgfrsafmy atevqqtigf geratgecws aailvsihsl
181 qavlldsvil givfsrishp kqrsrtvlis dcaciarrdg qlkfmfriad iqkrsvidpr
241 vrvvmytwgp grrtaegeri pviaqdmsvs ldctlllpvt vehsideasp lfchtsqsle
301 pavgaeivvt feasselgyt fmarqsylps eihwghtfvn vilpaalgdt qhevdlfhdv
361 epqmglcdem tqphrlsrkv vfgsgtsnvv pgrllhentl vlsedavvac rngrpyfmfr
421 lgdtfpghvm dvqvsahlyr whtrhtaege llpyeehplk lepvdlllry pvtvfheldp
481 ayspvahwas qrgllqdada evvvvargtl ysrqevvtrt rvysvlgdvk wghaflpvvl
541 pgsgtaalgt ssklgaavdw shfhatapit msqmsevqgt pgrptvqqpl apslafsgmd
601 rngstgslss lsqqlsqpgp pvatpapdaa ypasaapapq gqlalqlrlp laqqfqrpgi
661 qrspsalllq sgggggdicq nrpastlgfv apgvmppgfa rrtgvdddd
//