LOCUS       XP_004067079            1163 aa            linear   VRT 15-FEB-2018
DEFINITION  cartilage intermediate layer protein 1 [Oryzias latipes].
ACCESSION   XP_004067079
VERSION     XP_004067079.1
DBLINK      BioProject: PRJNA183868
DBSOURCE    REFSEQ: accession XM_004067031.4
KEYWORDS    RefSeq.
SOURCE      Oryzias latipes (Japanese medaka)
  ORGANISM  Oryzias latipes
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes;
            Adrianichthyidae; Oryziinae; Oryzias.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_019861.2) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Oryzias latipes Annotation Release
                                           103
            Annotation Version          :: 103
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Oryzias latipes"
                     /db_xref="taxon:8090"
                     /chromosome="3"
     Protein         1..1163
                     /product="cartilage intermediate layer protein 1"
                     /calculated_mol_wt=129934
     Region          48..131
                     /region_name="Mucin2_WxxW"
                     /note="Mucin-2 protein WxxW repeating region; pfam13330"
                     /db_xref="CDD:433121"
     Region          143..190
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          297..365
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:433584"
     Region          315..319
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          328..333
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          346..349
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          359..364
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          373..376
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..1163
                     /gene="cilp"
                     /coded_by="XM_004067031.4:127..3618"
                     /db_xref="GeneID:101166038"
ORIGIN      
        1 mwvkreimpq rplvflaita avvltaqgsw rrdnkasdvy hsndhymwtt wfnvdhpggr
       61 gdyeqldair fyyrsrvcet praveartte wiparetgei vhadpsvgfw clnteqspgr
      121 ncsnyavrfl cpkdssqttq gtwgpwsnws pcpalcgqea mqrryrscrs qlvpcsgpkt
      181 eekpcngpec inadcslrcv mgrvnadcda cmceehillg svrsagglia tgaailrank
      241 lltltdhngh fripgicpdg nttltvnvkg haslnavvps stertsvlti qlkraeklhi
      301 lsnpeskarr egqsvafcck vagrpepdky qwfhnntvme metdgmlvlr dlhsqqagey
      361 ycrasgasgt ikskpatlkv igkderscnp kpeshlirlp hdchqnttds fyydvgkcps
      421 sqctgqidns irckdklayc cgvakmeerq ltcqgyqlpt mvvtecgckk cvdtkavvhg
      481 raiaadngep mrfghifmng vrvsrtgykg tfsiqvppdt drfvltfvdn mqkfvnttkv
      541 lpfntkggav yhevkllrkk npvtisslet ntlelgevkd qeamvqiqip phsfykenge
      601 vftgnvsasv tfldprdvst aaaaqsdlnf ignegdtlpl rtygmfsidf raeennevln
      661 agevkvflds aqvkmsehld amklwslnpd tglweeegdl kierknrgkr eertflignm
      721 eirerrlfnl dvpenrrcyv kvrafrgerf mpseqvegvt vslinmepta gyssnprawg
      781 rfdsvitgsn gaclpafcde qkpdaytafv manlggeele vvpsapkfnp sligvpqpyl
      841 gklnyrrtdh edprvkktaf sinvakpspn taeeangpvy tfenlkecee apfsaghfrf
      901 srvegdrydy ntvpfneddp mswtedylsw wpkpmeyrac yikikinsph einvrsrnmg
      961 gthpktvgql yglrdtrsir dmdlanvsav clefkcsgml fdqdrvdrtl vkvipqgscr
     1021 rdgvntmlqe ylvnhlplav nndtneftml gpldplghny giytvtdqdp rtakeialgr
     1081 cfdgtsdgts rvmktnegva ltftcgdrdg trqsvfqasr gqigavvrgk trntrgrhra
     1141 nssrgipkrs arnpvrklak ats
//