GenomeNet

Database: RefSeq
Entry: XP_005826111
LinkDB: XP_005826111
Original site: XP_005826111 
LOCUS       XP_005826111             662 aa            linear   PLN 24-OCT-2013
DEFINITION  hypothetical protein GUITHDRAFT_114790 [Guillardia theta CCMP2712].
ACCESSION   XP_005826111
VERSION     XP_005826111.1
DBSOURCE    REFSEQ: accession XM_005826054.1
KEYWORDS    RefSeq.
SOURCE      Guillardia theta CCMP2712
  ORGANISM  Guillardia theta CCMP2712
            Eukaryota; Cryptophyta; Pyrenomonadales; Geminigeraceae;
            Guillardia.
REFERENCE   1  (residues 1 to 662)
  AUTHORS   Curtis,B.A., Tanifuji,G., Burki,F., Gruber,A., Irimia,M.,
            Maruyama,S., Arias,M.C., Ball,S.G., Gile,G.H., Hirakawa,Y.,
            Hopkins,J.F., Kuo,A., Rensing,S.A., Schmutz,J., Symeonidi,A.,
            Elias,M., Eveleigh,R.J., Herman,E.K., Klute,M.J., Nakayama,T.,
            Obornik,M., Reyes-Prieto,A., Armbrust,E.V., Aves,S.J., Beiko,R.G.,
            Coutinho,P., Dacks,J.B., Durnford,D.G., Fast,N.M., Green,B.R.,
            Grisdale,C., Hempe,F., Henrissat,B., Hoppner,M.P., Ishida,K.-I.,
            Kim,E., Koreny,L., Kroth,P.G., Liu,Y., Malik,S.-B., Maier,U.G.,
            McRose,D., Mock,T., Neilson,J.A., Onodera,N.T., Poole,A.M.,
            Pritham,E.J., Richards,T.A., Rocap,G., Roy,S.W., Sarai,C.,
            Schaack,S., Shirato,S., Slamovits,C.H., Spencer,D.F., Suzuki,S.,
            Worden,A.Z., Zauner,S., Barry,K., Bell,C., Bharti,A.K., Crow,J.A.,
            Grimwood,J., Kramer,R., Lindquist,E., Lucas,S., Salamov,A.,
            McFadden,G.I., Lane,C.E., Keeling,P.J., Gray,M.W., Grigoriev,I.V.
            and Archibald,J.M.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Algal nuclear genomes reveal evolutionary mosaicism and fate of
            nucleomorphs
  JOURNAL   Nature (2012) In press
REFERENCE   2  (residues 1 to 662)
  AUTHORS   Kuo,A., Curtis,B.A., Tanifuji,G., Burki,F., Gruber,A., Irimia,M.,
            Maruyama,S., Arias,M.C., Ball,S.G., Gile,G.H., Hirakawa,Y.,
            Hopkins,J.F., Rensing,S.A., Schmutz,J., Symeonidi,A., Elias,M.,
            Eveleigh,R.J., Herman,E.K., Klute,M.J., Nakayama,T., Obornik,M.,
            Reyes-Prieto,A., Armbrust,E.V., Aves,S.J., Beiko,R.G., Coutinho,P.,
            Dacks,J.B., Durnford,D.G., Fast,N.M., Green,B.R., Grisdale,C.,
            Hempe,F., Henrissat,B., Hoppner,M.P., Ishida,K.-I., Kim,E.,
            Koreny,L., Kroth,P.G., Liu,Y., Malik,S.-B., Maier,U.G., McRose,D.,
            Mock,T., Neilson,J.A., Onodera,N.T., Poole,A.M., Pritham,E.J.,
            Richards,T.A., Rocap,G., Roy,S.W., Sarai,C., Schaack,S.,
            Shirato,S., Slamovits,C.H., Spencer,D.F., Suzuki,S., Worden,A.Z.,
            Zauner,S., Barry,K., Bell,C., Bharti,A.K., Crow,J.A., Grimwood,J.,
            Kramer,R., Lindquist,E., Lucas,S., Salamov,A., McFadden,G.I.,
            Lane,C.E., Keeling,P.J., Gray,M.W., Grigoriev,I.V. and
            Archibald,J.M.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (02-NOV-2012) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to EKX39131.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Guillardia theta CCMP2712"
                     /strain="CCMP2712"
                     /db_xref="taxon:905079"
                     /chromosome="Unknown"
     Protein         1..662
                     /product="hypothetical protein"
                     /calculated_mol_wt=71503
     Region          4..413
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:302748"
     Region          14..417
                     /region_name="Aminotran_5"
                     /note="Aminotransferase class-V; pfam00266"
                     /db_xref="CDD:278684"
     Site            order(56..57,60,136,175,178,199,202)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99742"
     Site            202
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99742"
     Region          446..>525
                     /region_name="MOSC_N"
                     /note="MOSC N-terminal beta barrel domain; pfam03476"
                     /db_xref="CDD:281474"
     CDS             1..662
                     /locus_tag="GUITHDRAFT_114790"
                     /coded_by="XM_005826054.1:1..1989"
                     /db_xref="InterPro:IPR000192"
                     /db_xref="JGIDB:Guith1_114790"
                     /db_xref="GeneID:17295871"
ORIGIN      
        1 matrggskks eeassisprt kftsimleai rrarlavlrh fhareseyav vftsgctqai
       61 kivaenfrwa agrsvfaytv nnhnsvlgar qyaksagcay hpiphaqaae vlesaakdad
      121 egskeqttfs lfafpaecnf sgqkldlswt ervqagalnq llgcggdtrw kvlldaakha
      181 stsplrldge hkpdfitlsf ykmfgyptgl gallirresa aclekktfag gtvlaaradd
      241 dmfvlreslh erledgtipf lsimaaelgl rhleeigmeg ieqhtwslrd ffaselgkmr
      301 hangrkaamv ygpppsspss avgsiccfnm lqpagglldy shveelaclv ginlrtgsfc
      361 npgankemlg htsedvelfl regkvcgdrr cviggkatga vrvsfgymst fddarrvlrf
      421 letnfvdkge eeeqaggaga qderiatvqe lilfpiksca pqivssssgw lltssglfld
      481 rkaepnmahv qpsivmeera mmvrclskpe lgtlrislee edvdrmageg gggggggggg
      541 gggslsslgg mlfkgeiwgg rsttrsfrvc grkevglcyd ksvnewfskp pqpdrrsgsa
      601 aileeekqak tfhshggqll mvseesmygl wqrlrakhps sssssssrpr tpgglgklqg
      661 qi
//
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