GenomeNet

Database: RefSeq
Entry: XP_005850270
LinkDB: XP_005850270
Original site: XP_005850270 
LOCUS       XP_005850270             991 aa            linear   PLN 28-OCT-2013
DEFINITION  hypothetical protein CHLNCDRAFT_57031 [Chlorella variabilis].
ACCESSION   XP_005850270
VERSION     XP_005850270.1
DBSOURCE    REFSEQ: accession XM_005850208.1
KEYWORDS    RefSeq.
SOURCE      Chlorella variabilis
  ORGANISM  Chlorella variabilis
            Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes;
            Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella clade;
            Chlorella.
REFERENCE   1  (residues 1 to 991)
  AUTHORS   Blanc,G., Duncan,G., Agarkova,I., Borodovsky,M., Gurnon,J., Kuo,A.,
            Lindquist,E., Lucas,S., Pangilinan,J., Polle,J., Salamov,A.,
            Terry,A., Yamada,T., Dunigan,D.D., Grigoriev,I.V., Claverie,J.M.
            and Van Etten,J.L.
  TITLE     The Chlorella variabilis NC64A Genome Reveals Adaptation to
            Photosymbiosis, Coevolution with Viruses, and Cryptic Sex
  JOURNAL   Plant Cell 22 (9), 2943-2955 (2010)
   PUBMED   20852019
REFERENCE   2  (residues 1 to 991)
  AUTHORS   Kuo,A., Terry,A., Salamov,A., Pangilinan,J., Lindquist,E.,
            Lucas,S., Pitluck,S., Lomsadze,A., Borodovsky,M., Blanc,G.,
            Duncan,G., Dunigan,D., Claverie,J.-M., Van Etten,J. and
            Grigoriev,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-AUG-2010) US DOE Joint Genome Institute, 2800
            Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to EFN58168.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..991
                     /organism="Chlorella variabilis"
                     /strain="NC64A"
                     /db_xref="taxon:554065"
                     /chromosome="Unknown"
     Protein         1..991
                     /product="hypothetical protein"
                     /calculated_mol_wt=107217
     Region          122..246
                     /region_name="Ion_trans_2"
                     /note="Ion channel; cl21560"
                     /db_xref="CDD:451311"
     Region          256..414
                     /region_name="IRK_C"
                     /note="Inward rectifier potassium channel C-terminal
                     domain; pfam17655"
                     /db_xref="CDD:435949"
     Region          454..>563
                     /region_name="IRK_C"
                     /note="Inward rectifier potassium channel C-terminal
                     domain; pfam17655"
                     /db_xref="CDD:435949"
     Region          <624..830
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:237057"
     CDS             1..991
                     /locus_tag="CHLNCDRAFT_57031"
                     /coded_by="XM_005850208.1:141..3116"
                     /note="similar to unnamed protein product; expressed"
                     /db_xref="InterPro:IPR001838"
                     /db_xref="JGIDB:ChlNC64A_1_57031"
                     /db_xref="GeneID:17357593"
ORIGIN      
        1 mkmpllgrrp pmapdsgeaa ataawsaava aaaeiersrs palsvtsatg asqprqgqht
       61 lerlidlpgd hfsfgdiagm grshsaggll qedyfnrgkg lneavreqln lpalvesgkh
      121 agrsrveytg agigmhlfkr dffitmlqtp lisllawfai iylvvfffwg giwylvvkfy
      181 pgclygatgf veswtfaiat qmtigygntg pqqcylaaal isiqgvsdll lnavilglvf
      241 akvaspkhra fsiyisdssv itrrdgilkf mfrvadirrt qviepkvkaf lytwgagrvt
      301 aegekiqvrc eqldidyidg mlllpliieh tidersplcg htydslaamk aeivvtfeat
      361 tetgnpffar qsylaqeinw schfeeiirq pgpfeerpry svdlnhfhdv lcpaadspsq
      421 asqarlcssl vvnrakravp ypllgentlv lsdvlcvrpa adgssamelv crvadtypnq
      481 mvevmariyl yrwrapdwca anpdrspfal hqldcgyksg tdrlylrlpq qvvhriddks
      541 plaswlepgg lsadadseiv vllqsylhvs gknrmrqrty rvnahvrygf tfsptvrapa
      601 ecsdakprvr wahffdvepv awaqsggaar ptlhihtsav nhpavraylh rgstlaapes
      661 haparaqqer npqlaevldr pqamspraqw aaaaretagv eaaaaaaaaa aaggpgggsq
      721 wqgagpaaep amqwavdalg rdstatpdap mdryaaslar psallpqqgp vaseagsrqq
      781 paarlsgppd lgtvsagpav pldryastla rpsqeiagqd vagaaaasrd eqlaapawet
      841 vyheqqqqqy qqqqqqhypp hwqyqpdvqr sdltatpgvp laryaamvag paelesprfm
      901 sgstsasssa talpprspvs aarfaglpag rpisrsgsrg vpeaeevege ddmltgqrvg
      961 swqwrrslas lqatlqaihe qgesapgsds d
//
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