GenomeNet

Database: RefSeq
Entry: XP_006003324
LinkDB: XP_006003324
Original site: XP_006003324 
LOCUS       XP_006003324            1836 aa            linear   VRT 26-OCT-2015
DEFINITION  PREDICTED: sodium channel protein type 4 subunit alpha-like isoform
            X1 [Latimeria chalumnae].
ACCESSION   XP_006003324
VERSION     XP_006003324.1
DBLINK      BioProject: PRJNA219830
DBSOURCE    REFSEQ: accession XM_006003262.2
KEYWORDS    RefSeq.
SOURCE      Latimeria chalumnae (coelacanth)
  ORGANISM  Latimeria chalumnae
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Coelacanthiformes; Coelacanthidae; Latimeria.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_005819918.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Latimeria chalumnae Annotation
                                           Release 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 6.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1836
                     /organism="Latimeria chalumnae"
                     /isolate="SAIAB 97564"
                     /db_xref="taxon:7897"
                     /chromosome="Unknown"
                     /tissue_type="blood"
                     /country="South Africa"
                     /note="Wild Caught"
     Protein         1..1836
                     /product="sodium channel protein type 4 subunit alpha-like
                     isoform X1"
                     /calculated_mol_wt=209061
     Region          127..438
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:425730"
     Region          613..826
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:425730"
     Region          852..1043
                     /region_name="Na_trans_assoc"
                     /note="Sodium ion transport-associated; pfam06512"
                     /db_xref="CDD:428983"
     Region          1047..1321
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:425730"
     Region          1313..1365
                     /region_name="Na_channel_gate"
                     /note="Inactivation gate of the voltage-gated sodium
                     channel alpha subunits; cd13433"
                     /db_xref="CDD:240441"
     Site            1327..1330
                     /site_type="other"
                     /note="putative hydrophobic latch"
                     /db_xref="CDD:240441"
     Region          1370..1625
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:425730"
     CDS             1..1836
                     /gene="LOC102366443"
                     /coded_by="XM_006003262.2:157..5667"
                     /db_xref="GeneID:102366443"
ORIGIN      
        1 maglrvtpgp dmlrrftres laeiekrfak kqadkakkkh velnedlapk pssdlevgks
       61 lpfiygdlpp eligvpleel dpfysgertf ivinrgktin rfsttpalyl lspfssvrrg
      121 aikvlihslf sffimitilt ncvfmtmsap ppwaknveyt ftgiytfesm ikilargfci
      181 dsftflrdpw nwldfsvivm ayvtefvdlg nvsalrtfrv lralktitvi pglktivgal
      241 iqsvkklsdv miltvfclsv faliglqlfm gnlrqkcviw pppfndtwtd fdlgmgndtf
      301 hnttiydsaa aysnttfdwd aylnneenfy fldgqldall cgnssdagrc pegflcmkag
      361 rnpnygytsf dtfswaflsl frlmtqdywe nlfqltlraa gktymiffvv iiflgsfyli
      421 nlilavvama yaeqneatle eakqqeeefq rqleqlkkqq eeqaaklhgs sgqhlsskds
      481 lasskgqkrd mdtksddeqs ggegrkmand wngrpvpsvv idrvstgees etidreqekt
      541 asnhpsidhl eeptlqkrta sivsvvsntm eeleeahqkc ppwwykfayk fliwdccilw
      601 vkfkeivkfi vmdpfvdlgi ticiilntmf mamehypmtp qfenvlsign lvftgiftae
      661 mvfkiialdp yyyfqigwni fdsiivtlsl velglanvqg lsvlrsfrll rvfklakswp
      721 tlnmlikiig nsvgalgnlt lvlaiivfif avvgmqlfgk nykdcvckis sdcvlprwhm
      781 tdffhafliv frilcgewie tmwdcmevag qplcfivfmm vmvignlvvl nlflalllss
      841 fsadnlsasd ddnemnnlqi ainritrgvd fikslpvrll qgirrtdned ddqkkedyvl
      901 nhmdpvpesk sdfkpvdgva skephladev dqmsfmdnps iavrvpiaaa esdleiadee
      961 mtsesetedv kkkesdigss rcstadyqap evveevvaee epenedpepc ftegcirrcp
     1021 cltvditqgs gklwwtlrkt cfkivehnwf etfiifmill ssgalafedv yierrrvvki
     1081 ileyadkvft yvfvvemllk wtaygfktyf tnawcwldfl ivdvslislt anwmgyselg
     1141 pikslrtlra lrplralsrf egmrvvvnal lgaipsimnv llvclifwli fsimgvnlfa
     1201 gkfyrcvntt tgelfdvsmv nnksdcfsly dtgevrwmnv kvnfdnvgfg ylsllqvatf
     1261 kgwmeimyaa vdsreveeqp syeinlymyl yfvifiifga fftlnlfigv iidnfnqqkk
     1321 kfggkdifmt eeqkkyynam kklgskkpqk piprpqnkiq gvvfdfvskq afdifimvli
     1381 clnmvtmmie tddqsaekee ilywvnlvfi vvftgecilk iialrhyyft mgwnifdfvv
     1441 vilsvvgiml adiiekyfvs ptlfrvirla rigrilrlik gakgirtllf almmslpalf
     1501 niglllflvm fiysifgmsn fayvkreagi ddifnfetfg nsiiclfqit tsagwdglls
     1561 pilnsgppdc dptienpgtd vkgdcgnpsv givffcsyii isflivvnmy iaiilenfnv
     1621 ateesaeplc eddfemfyet wekfdpdatq fidycklsdf vdtlqdplki pkpnriklit
     1681 mdlpmvagdk ihcldilfal tkevlgdsge mdalkqtmee kfmaanpskv syepitstlk
     1741 rrheevsvti iqrayrrhlf mrsvkqasym yrqneecspd eeapekegli atkmkafygk
     1801 gneteeempa saprtgtsps edkdwdekgn vresiv
//
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