LOCUS       XP_006228323             470 aa            linear   ROD 11-JUN-2023
DEFINITION  histone-lysine N-methyltransferase KMT5C isoform X1 [Rattus
            norvegicus].
ACCESSION   XP_006228323
VERSION     XP_006228323.1
DBLINK      BioProject: PRJNA677964
DBSOURCE    REFSEQ: accession XM_006228261.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Rattus norvegicus"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /country="USA: Wisconsin, Milwaukee, Medical College of
                     Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     Protein         1..470
                     /product="histone-lysine N-methyltransferase KMT5C isoform
                     X1"
                     /calculated_mol_wt=53476
     Region          102..243
                     /region_name="SET_KMT5C"
                     /note="SET domain (including post-SET domain) found in
                     histone-lysine N-methyltransferase 5C (KMT5C) and similar
                     proteins; cd19185"
                     /db_xref="CDD:380962"
     Site            order(114,116..117,120..121,160..161,179..183,217,222,
                     229..231)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380962"
     Site            order(114,117,120..121,150,159..167,171,174,178..183,191,
                     193,217,220..222,229..231)
                     /site_type="active"
                     /db_xref="CDD:380962"
     Site            order(150,159..167,171,174,178..179,181,191,193,217,
                     220..221)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380962"
     Site            order(185,229,231,234)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380962"
     Region          245..>310
                     /region_name="PHA02682"
                     /note="ORF080 virion core protein; Provisional"
                     /db_xref="CDD:177464"
     CDS             1..470
                     /gene="Kmt5c"
                     /gene_synonym="Suv420h2"
                     /coded_by="XM_006228261.2:1461..2873"
                     /db_xref="GeneID:308345"
                     /db_xref="RGD:1305226"
ORIGIN      
        1 mgpdrvtare lcenddlats lvldpylgfr thkmnvspvp tlrrqhhlrs aleaflrqrd
       61 leaafraltl ggwmahyfqn raprqeaalk nhifcylraf lpesgftilp ctrysmetng
      121 akivstrawk kneklellvg ciaelreede yllragendf svmystrkrs aqlwlgpaaf
      181 inhdckpnck fvpsdgntac vkvlrdiepg devtcfygeg ffgeknehce cytcerkgeg
      241 afrlqprepe lrprpldkye lretkrrlqq cldssqqnll slracshlsp lrpdpfcaac
      301 qpscllpvsp hmdylplwlq wvpqpqprvr prkrrrrrrr rpripqasls pdlhtacvsl
      361 hrwggcgphc qlraeamvtl hllpqtrwtp kqdwywarry glpsvvrvel splapalpaa
      421 papagnlgpt ptpdlipkqa lafapfcppk rlrlvvshgs idldinsgep
//