GenomeNet

Database: RefSeq
Entry: XP_007702833
LinkDB: XP_007702833
Original site: XP_007702833 
LOCUS       XP_007702833            1008 aa            linear   PLN 06-FEB-2020
DEFINITION  glycoside hydrolase family 35 protein [Bipolaris sorokiniana
            ND90Pr].
ACCESSION   XP_007702833
VERSION     XP_007702833.1
DBLINK      BioProject: PRJNA245122
            BioSample: SAMN02981285
DBSOURCE    REFSEQ: accession XM_007704643.1
KEYWORDS    RefSeq.
SOURCE      Bipolaris sorokiniana ND90Pr
  ORGANISM  Bipolaris sorokiniana ND90Pr
            Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
            Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae;
            Pleosporaceae; Bipolaris.
REFERENCE   1  (residues 1 to 1008)
  AUTHORS   Ohm,R.A., Feau,N., Henrissat,B., Schoch,C.L., Horwitz,B.A.,
            Barry,K.W., Condon,B.J., Copeland,A.C., Dhillon,B., Glaser,F.,
            Hesse,C.N., Kosti,I., LaButti,K., Lindquist,E.A., Lucas,S.,
            Salamov,A.A., Bradshaw,R.E., Ciuffetti,L., Hamelin,R.C., Kema,G.H.,
            Lawrence,C., Scott,J.A., Spatafora,J.W., Turgeon,B.G., de Wit,P.J.,
            Zhong,S., Goodwin,S.B. and Grigoriev,I.V.
  TITLE     Diverse lifestyles and strategies of plant pathogenesis encoded in
            the genomes of eighteen Dothideomycetes fungi
  JOURNAL   PLoS Pathog. 8 (12), E1003037 (2012)
   PUBMED   23236275
REFERENCE   2  (residues 1 to 1008)
  AUTHORS   Condon,B.J., Leng,Y., Wu,D., Bushley,K.E., Ohm,R.A., Otillar,R.,
            Martin,J., Schackwitz,W., Grimwood,J., MohdZainudin,N., Xue,C.,
            Wang,R., Dhillon,B., Tu,Z.J., Steffenson,B.J., Salamov,A., Sun,H.,
            Lowry,S., LaButti,K., Han,J., Copeland,A., Lindquist,E., Lucas,S.,
            Barry,K., Schmutz,J., Baker,S., Grigoriev,I.V., Zhong,S. and
            Turgeon,B.G.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Comparative genome structure, secondary metabolite and effector
            coding capacity across Cochliobolus pathogens
  JOURNAL   Unpublished
REFERENCE   3  (residues 1 to 1008)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-FEB-2020) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   4  (residues 1 to 1008)
  AUTHORS   Ohm,R.A., Otillar,R., Martin,J., Schackwitz,W., Grimwood,J.,
            Salamov,A., Sun,H., Lowry,S., LaButti,K., Han,J., Copeland,A.,
            Lindquist,E., Lucas,S., Barry,K., Schmutz,J., Condon,B.J., Leng,Y.,
            Wu,D., Bushley,K.E., MohdZainudin,N., Xue,C., Wang,R., Dhillon,B.,
            Tu,Z.J., Steffenson,B.J., Baker,S., Zhong,S., Turgeon,B.G. and
            Grigoriev,I.V.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2012) US DOE Joint Genome Institute, 2800
            Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to EMD61501.
            
            ##Metadata-START##
            Organism Display Name :: Cochliobolus sativus ND90Pr
            GOLD Stamp ID         :: Gi04490
            ##Metadata-END##
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Bipolaris sorokiniana ND90Pr"
                     /strain="ND90Pr"
                     /db_xref="taxon:665912"
                     /chromosome="Unknown"
     Protein         1..1008
                     /product="glycoside hydrolase family 35 protein"
                     /calculated_mol_wt=109502
     Region          52..384
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl38930"
                     /db_xref="CDD:453893"
     Region          413..572
                     /region_name="BetaGal_dom2"
                     /note="Beta-galactosidase, domain 2; pfam10435"
                     /db_xref="CDD:402180"
     Region          584..647
                     /region_name="BetaGal_dom3"
                     /note="Beta-galactosidase, domain 3; pfam13363"
                     /db_xref="CDD:433147"
     Region          680..793
                     /region_name="BetaGal_dom4_5"
                     /note="Beta-galactosidase jelly roll domain; pfam13364"
                     /db_xref="CDD:433148"
     Region          849..969
                     /region_name="BetaGal_dom4_5"
                     /note="Beta-galactosidase jelly roll domain; pfam13364"
                     /db_xref="CDD:433148"
     CDS             1..1008
                     /locus_tag="COCSADRAFT_148314"
                     /coded_by="XM_007704643.1:84..3110"
                     /db_xref="GeneID:19131447"
                     /db_xref="InterPro:IPR001944"
                     /db_xref="JGIDB:Cocsa1_148314"
ORIGIN      
        1 mkgfaglgsa valgclaveg aaravgytsp tefikpykrg plqdivtwdk dtlfvngeri
       61 flysgevhpy rlpvpdlyid ifqkikalgf ngvsfyvdwa llegkpgvyr eegvfslqpf
      121 fdaaqeagiy llarpgpyin aevsgggfpg wiqringtlr trapdflaat dnymknigat
      181 iakaqitngg piilvqpene ytqatsaikp fpdpvymtyv edqirnasiv vplisndasp
      241 kgynapgtpa avdiyghdgy plgfdcanpt rwpdnnlptn wqqlhqqqsp ttpysiiefq
      301 sgsfdpwggp gfdkcgilvg aefnrvfykq lysfgvtiln lymtfggtnw gnlghpggyt
      361 sydyaapiee drqvkrekys elklqanfwk vspayltasr gaaststwtt tsdlsvtpah
      421 gnktgfyflr hakynslatt syqlkistqa fgnitvpqln gtsltlngrd akvhvtdydv
      481 ggtniaysta eiftwhkydd ktvlivyggp gethelsvda tgleilegdv ksvatrghtl
      541 lsfqadatrk vvklgtespi yvymldrnea fkywsvdqap hdaskpvilk agylmrtakv
      601 tgdtlaltgd vnattpieii ggatgvskmt fngkdvsfvt skegtftati dlpkpnisip
      661 klselewkyi dslpeiqpgy ddskwtvadl kktynslrrl ttpvslyssd ygyhtgtlly
      721 rgtftatgne ttlqlstqgg safgssawig tqflgswrgy daamngnstf tlpkltagtk
      781 ytitvvidnq gldenwtigt etmknprgil nyklsghdaa dvtwkltgnl ggedyrdisr
      841 gplnegglfv erqglhlpga laasdldwkp sagpvtdgis apgigffate feldvpsgyd
      901 vplsftftna tsssagssvp ayrvqlyvng wqygkyvnnv gpqtkfpvpe gilnykgtny
      961 mgvslwglda gatkigglel kvdaeiwsgl gdvavvegeg ykkregay
//
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