LOCUS XP_007702833 1008 aa linear PLN 06-FEB-2020
DEFINITION glycoside hydrolase family 35 protein [Bipolaris sorokiniana
ND90Pr].
ACCESSION XP_007702833
VERSION XP_007702833.1
DBLINK BioProject: PRJNA245122
BioSample: SAMN02981285
DBSOURCE REFSEQ: accession XM_007704643.1
KEYWORDS RefSeq.
SOURCE Bipolaris sorokiniana ND90Pr
ORGANISM Bipolaris sorokiniana ND90Pr
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae;
Pleosporaceae; Bipolaris.
REFERENCE 1 (residues 1 to 1008)
AUTHORS Ohm,R.A., Feau,N., Henrissat,B., Schoch,C.L., Horwitz,B.A.,
Barry,K.W., Condon,B.J., Copeland,A.C., Dhillon,B., Glaser,F.,
Hesse,C.N., Kosti,I., LaButti,K., Lindquist,E.A., Lucas,S.,
Salamov,A.A., Bradshaw,R.E., Ciuffetti,L., Hamelin,R.C., Kema,G.H.,
Lawrence,C., Scott,J.A., Spatafora,J.W., Turgeon,B.G., de Wit,P.J.,
Zhong,S., Goodwin,S.B. and Grigoriev,I.V.
TITLE Diverse lifestyles and strategies of plant pathogenesis encoded in
the genomes of eighteen Dothideomycetes fungi
JOURNAL PLoS Pathog. 8 (12), E1003037 (2012)
PUBMED 23236275
REFERENCE 2 (residues 1 to 1008)
AUTHORS Condon,B.J., Leng,Y., Wu,D., Bushley,K.E., Ohm,R.A., Otillar,R.,
Martin,J., Schackwitz,W., Grimwood,J., MohdZainudin,N., Xue,C.,
Wang,R., Dhillon,B., Tu,Z.J., Steffenson,B.J., Salamov,A., Sun,H.,
Lowry,S., LaButti,K., Han,J., Copeland,A., Lindquist,E., Lucas,S.,
Barry,K., Schmutz,J., Baker,S., Grigoriev,I.V., Zhong,S. and
Turgeon,B.G.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Comparative genome structure, secondary metabolite and effector
coding capacity across Cochliobolus pathogens
JOURNAL Unpublished
REFERENCE 3 (residues 1 to 1008)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2020) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 4 (residues 1 to 1008)
AUTHORS Ohm,R.A., Otillar,R., Martin,J., Schackwitz,W., Grimwood,J.,
Salamov,A., Sun,H., Lowry,S., LaButti,K., Han,J., Copeland,A.,
Lindquist,E., Lucas,S., Barry,K., Schmutz,J., Condon,B.J., Leng,Y.,
Wu,D., Bushley,K.E., MohdZainudin,N., Xue,C., Wang,R., Dhillon,B.,
Tu,Z.J., Steffenson,B.J., Baker,S., Zhong,S., Turgeon,B.G. and
Grigoriev,I.V.
CONSRTM US DOE Joint Genome Institute (JGI-PGF)
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2012) US DOE Joint Genome Institute, 2800
Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence is identical to EMD61501.
##Metadata-START##
Organism Display Name :: Cochliobolus sativus ND90Pr
GOLD Stamp ID :: Gi04490
##Metadata-END##
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..1008
/organism="Bipolaris sorokiniana ND90Pr"
/strain="ND90Pr"
/db_xref="taxon:665912"
/chromosome="Unknown"
Protein 1..1008
/product="glycoside hydrolase family 35 protein"
/calculated_mol_wt=109502
Region 52..384
/region_name="AmyAc_family"
/note="Alpha amylase catalytic domain family; cl38930"
/db_xref="CDD:453893"
Region 413..572
/region_name="BetaGal_dom2"
/note="Beta-galactosidase, domain 2; pfam10435"
/db_xref="CDD:402180"
Region 584..647
/region_name="BetaGal_dom3"
/note="Beta-galactosidase, domain 3; pfam13363"
/db_xref="CDD:433147"
Region 680..793
/region_name="BetaGal_dom4_5"
/note="Beta-galactosidase jelly roll domain; pfam13364"
/db_xref="CDD:433148"
Region 849..969
/region_name="BetaGal_dom4_5"
/note="Beta-galactosidase jelly roll domain; pfam13364"
/db_xref="CDD:433148"
CDS 1..1008
/locus_tag="COCSADRAFT_148314"
/coded_by="XM_007704643.1:84..3110"
/db_xref="GeneID:19131447"
/db_xref="InterPro:IPR001944"
/db_xref="JGIDB:Cocsa1_148314"
ORIGIN
1 mkgfaglgsa valgclaveg aaravgytsp tefikpykrg plqdivtwdk dtlfvngeri
61 flysgevhpy rlpvpdlyid ifqkikalgf ngvsfyvdwa llegkpgvyr eegvfslqpf
121 fdaaqeagiy llarpgpyin aevsgggfpg wiqringtlr trapdflaat dnymknigat
181 iakaqitngg piilvqpene ytqatsaikp fpdpvymtyv edqirnasiv vplisndasp
241 kgynapgtpa avdiyghdgy plgfdcanpt rwpdnnlptn wqqlhqqqsp ttpysiiefq
301 sgsfdpwggp gfdkcgilvg aefnrvfykq lysfgvtiln lymtfggtnw gnlghpggyt
361 sydyaapiee drqvkrekys elklqanfwk vspayltasr gaaststwtt tsdlsvtpah
421 gnktgfyflr hakynslatt syqlkistqa fgnitvpqln gtsltlngrd akvhvtdydv
481 ggtniaysta eiftwhkydd ktvlivyggp gethelsvda tgleilegdv ksvatrghtl
541 lsfqadatrk vvklgtespi yvymldrnea fkywsvdqap hdaskpvilk agylmrtakv
601 tgdtlaltgd vnattpieii ggatgvskmt fngkdvsfvt skegtftati dlpkpnisip
661 klselewkyi dslpeiqpgy ddskwtvadl kktynslrrl ttpvslyssd ygyhtgtlly
721 rgtftatgne ttlqlstqgg safgssawig tqflgswrgy daamngnstf tlpkltagtk
781 ytitvvidnq gldenwtigt etmknprgil nyklsghdaa dvtwkltgnl ggedyrdisr
841 gplnegglfv erqglhlpga laasdldwkp sagpvtdgis apgigffate feldvpsgyd
901 vplsftftna tsssagssvp ayrvqlyvng wqygkyvnnv gpqtkfpvpe gilnykgtny
961 mgvslwglda gatkigglel kvdaeiwsgl gdvavvegeg ykkregay
//