GenomeNet

Database: RefSeq
Entry: XP_008620695
LinkDB: XP_008620695
Original site: XP_008620695 
LOCUS       XP_008620695            1359 aa            linear   PLN 29-JUL-2014
DEFINITION  hypothetical protein SDRG_16271 [Saprolegnia diclina VS20].
ACCESSION   XP_008620695
VERSION     XP_008620695.1
DBLINK      BioProject: PRJNA255245
DBSOURCE    REFSEQ: accession XM_008622473.1
KEYWORDS    RefSeq.
SOURCE      Saprolegnia diclina VS20
  ORGANISM  Saprolegnia diclina VS20
            Eukaryota; Stramenopiles; Oomycetes; Saprolegniales;
            Saprolegniaceae; Saprolegnia.
REFERENCE   1  (residues 1 to 1359)
  AUTHORS   Russ,C., Nusbaum,C., Tyler,B., van West,P., Dieguez-Uribeondo,J.,
            de Bruijn,I., Tripathy,S., Jiang,R., Young,S.K., Zeng,Q.,
            Gargeya,S., Fitzgerald,M., Haas,B., Abouelleil,A., Alvarado,L.,
            Arachchi,H.M., Berlin,A., Chapman,S.B., Goldberg,J., Griggs,A.,
            Gujja,S., Hansen,M., Howarth,C., Imamovic,A., Larimer,J.,
            McCowen,C., Montmayeur,A., Murphy,C., Neiman,D., Pearson,M.,
            Priest,M., Roberts,A., Saif,S., Shea,T., Sisk,P., Sykes,S.,
            Wortman,J., Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genome Sequencing Platform
  TITLE     The Genome Sequence of Saprolegnia declina VS20
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 1359)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUL-2014) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 1359)
  AUTHORS   Russ,C., Nusbaum,C., Tyler,B., van West,P., Dieguez-Uribeondo,J.,
            de Bruijn,I., Tripathy,S., Jiang,R., Young,S.K., Zeng,Q.,
            Gargeya,S., Fitzgerald,M., Haas,B., Abouelleil,A., Alvarado,L.,
            Arachchi,H.M., Berlin,A., Chapman,S.B., Goldberg,J., Griggs,A.,
            Gujja,S., Hansen,M., Howarth,C., Imamovic,A., Larimer,J.,
            McCowen,C., Montmayeur,A., Murphy,C., Neiman,D., Pearson,M.,
            Priest,M., Roberts,A., Saif,S., Shea,T., Sisk,P., Sykes,S.,
            Wortman,J., Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genome Sequencing Platform
  TITLE     Direct Submission
  JOURNAL   Submitted (18-APR-2012) Broad Institute of MIT and Harvard, 7
            Cambridge Center, Cambridge, MA 02142, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to EQC25899.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..1359
                     /organism="Saprolegnia diclina VS20"
                     /strain="VS20"
                     /isolation_source="Salmo salar eggs"
                     /host="Salmo salar"
                     /db_xref="taxon:1156394"
                     /chromosome="Unknown"
                     /country="Chile:Pucon"
     Protein         1..1359
                     /product="hypothetical protein"
                     /calculated_mol_wt=152433
     Region          123..1279
                     /region_name="FANC"
                     /note="Fanconi anemia ID complex proteins FANCI and
                     FANCD2; cl17018"
                     /db_xref="CDD:302591"
     Site            order(124,127..128,131..132,134..135,175,178..180,236,
                     239..240,282,286,295,344,348..349,351,429,437,440,467,
                     470..471,474,478,481,517,520,523..524,527,556,559..560,
                     563,565,644..646,648..649,652..653,655..657,660,679,
                     682..685,688,691,746)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:212593"
     Site            order(356..358,362..369,383..389,391,963..977,1005..1017,
                     1018..1019,1046..1063,1098..1111,1152..1171,1172..1179)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212593"
     Site            560
                     /site_type="other"
                     /note="ubiquitination site [posttranslational
                     modification]"
                     /db_xref="CDD:212593"
     CDS             1..1359
                     /locus_tag="SDRG_16271"
                     /coded_by="XM_008622473.1:67..4146"
                     /db_xref="GeneID:19956998"
ORIGIN      
        1 mdpraqqvlf qqrqlnrqae anvwgdgdey vdemdmlqsq airetvtdld datisgtvlq
       61 lyqamefldl ldfvkglfrg stkgelgsrp rkfevrrral clellellqq shlaqtkkhv
      121 tfctqlvdll qreidtldmt sipslvehvl hgiekayrdq eesgsvipmp lpsadllphl
      181 ygrmlcfshv alpshapsiw dfsdeaewtg avyveksldr llqarwplrl lsqmvnvlre
      241 vawsadqhaa icakflsqls iemtpvedgm qpdyallpgl yyhlllfvrd hprdlklmvl
      301 qslvahldql svdatkpkhh raptsghivf gprelrafqa tilyqlekll tqdtvlgavl
      361 lemllphrlt qswtsthfal llllrshvkf taaidkncle yfnglattss dgvtllldvl
      421 eafergqmev llssavalgf slfesrdqtv ldvgvqvily tfrhhecvra svleailhwc
      481 lstssmpslp pklphiklls allqhcvmdl daafldrird lleylpgfrl evarailrtl
      541 ppllkhkvhl rnalvltlrk amfrreessr aiaihgfcti ldcvlslsgs aggkpkyltq
      601 mvlpnnnass rplssqsltq rafvsqsqsi ldmdamefda ghlpsvfrqf agmfrramac
      661 qksvratlyr elktlvklsp dlatsiddlv wptlsaliet naaltpalql kpdeatplll
      721 dlvltcspdk vhsvlerllh melqdyeldt apmdpsvrvk aagkatidra sdllqlcdvv
      781 lnyvwgkddg mrssrlrpdq lehtlklvql recveeivsp sqapsaaagg kkkrgpkaka
      841 dkddnaikak aktvqpsats lnvgpivapf clvhprnllv alqsifgqgd vthhynvqqc
      901 vlqysrdlll ewrllssrsw levkpllifr msvrtqkdfl aqlarllwsa adgglsatgk
      961 qslaamayet lvvllsiapd laestlgtve hiqkkifall rqsheaeadl vlqllithwy
     1021 prlptrlnaw kwmeaicigq altslplvtr lftallleps yrvristaml aylengdadg
     1081 ndddddrvty aclntktigl vagvfldafd kscgatehtl ktvkamsevq ldavldqlte
     1141 lsrviaplit vsfphgpttl rlfrmllrlf klhalaiqak ikskvsqvsp plkmfldats
     1201 relaplvlnf vachheenkr kavanpkkkm paqeaklipd vifqveqydv giiklskrck
     1261 ttnfkrwcir rqardfrinq dkvqviigan dndeadaded eegvvtppee radeqapdde
     1321 edddcpatar hdqeedeede dddaqlqsrh vkrrrlmhd
//
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