GenomeNet

Database: RefSeq
Entry: XP_009545887
LinkDB: XP_009545887
Original site: XP_009545887 
LOCUS       XP_009545887            1098 aa            linear   PLN 09-OCT-2014
DEFINITION  glycoside hydrolase family 35 protein [Heterobasidion irregulare TC
            32-1].
ACCESSION   XP_009545887
VERSION     XP_009545887.1
DBLINK      BioProject: PRJNA245138
DBSOURCE    REFSEQ: accession XM_009547592.1
KEYWORDS    RefSeq.
SOURCE      Heterobasidion irregulare TC 32-1
  ORGANISM  Heterobasidion irregulare TC 32-1
            Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina;
            Agaricomycetes; Russulales; Bondarzewiaceae; Heterobasidion;
            Heterobasidion annosum species complex.
REFERENCE   1  (residues 1 to 1098)
  AUTHORS   Olson,A., Aerts,A., Asiegbu,F., Belbahri,L., Bouzid,O., Broberg,A.,
            Canback,B., Coutinho,P.M., Cullen,D., Dalman,K., Deflorio,G., van
            Diepen,L.T., Dunand,C., Duplessis,S., Durling,M., Gonthier,P.,
            Grimwood,J., Fossdal,C.G., Hansson,D., Henrissat,B., Hietala,A.,
            Himmelstrand,K., Hoffmeister,D., Hogberg,N., James,T.Y.,
            Karlsson,M., Kohler,A., Kues,U., Lee,Y.H., Lin,Y.C., Lind,M.,
            Lindquist,E., Lombard,V., Lucas,S., Lunden,K., Morin,E., Murat,C.,
            Park,J., Raffaello,T., Rouze,P., Salamov,A., Schmutz,J.,
            Solheim,H., Stahlberg,J., Velez,H., de Vries,R.P., Wiebenga,A.,
            Woodward,S., Yakovlev,I., Garbelotto,M., Martin,F., Grigoriev,I.V.
            and Stenlid,J.
  TITLE     Insight into trade-off between wood decay and parasitism from the
            genome of a fungal forest pathogen
  JOURNAL   New Phytol. 194 (4), 1001-1013 (2012)
   PUBMED   22463738
REFERENCE   2  (residues 1 to 1098)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2014) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 1098)
  AUTHORS   Ohm,R., Aerts,A., Salamov,A., Schmutz,J., Grimwood,J.,
            Lindquist,E., Lucas,S., Pitluck,S., Olson,A., Asiegbu,F.,
            Belbahri,L., Bouzid,O., Broberg,A., Canback,B., Coutinho,P.M.,
            Cullen,D., Dalman,K., Deflorio,G., van Diepen,L.T.A., Dunand,C.,
            Duplessis,S., Durling,M., Gonthier,P., Fossdal,C.G., Hansson,D.,
            Henrissat,B., Hietala,A., Himmelstrand,K., Hoffmeister,D.,
            Hogberg,N., James,T.Y., Karlsson,M., Lind,M., Kohler,A., Kues,U.,
            Lee,Y.-H., Lin,Y.-C., Lombard,V., Lunden,K., Morin,E., Murat,C.,
            Park,J., Raffaello,T., Rouze,P., Solheim,H., Stahlberg,J.,
            Velez,H., Velez,H., Wiebenga,A., Woodward,S., Yakovlev,I.,
            Garbelotto,M., Martin,F., Stenlid,J. and Grigoriev,I.V.
  CONSRTM   US DOE Joint Genome Institute (JGI-PGF)
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAY-2012) US DOE Joint Genome Institute, 2800
            Mitchell Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to ETW81426.
            
            ##Metadata-START##
            Organism Display Name :: Heterobasidion irregulare TC 32-1
            GOLD Stamp ID         :: Gi01578
            ##Metadata-END##
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Heterobasidion irregulare TC 32-1"
                     /strain="TC 32-1"
                     /host="Pinus resinosa"
                     /db_xref="taxon:747525"
                     /chromosome="Unknown"
                     /dev_stage="basidiospore"
                     /country="USA: Woodstock, Vermont"
                     /collection_date="1979"
     Protein         1..1098
                     /product="glycoside hydrolase family 35 protein"
                     /calculated_mol_wt=119168
     Region          137..462
                     /region_name="AmyAc_family"
                     /note="Alpha amylase catalytic domain family; cl07893"
                     /db_xref="CDD:298606"
     Region          498..627
                     /region_name="BetaGal_dom2"
                     /note="Beta-galactosidase, domain 2; pfam10435"
                     /db_xref="CDD:287416"
     Region          675..729
                     /region_name="BetaGal_dom3"
                     /note="Beta-galactosidase, domain 3; pfam13363"
                     /db_xref="CDD:290100"
     Region          778..899
                     /region_name="BetaGal_dom4_5"
                     /note="Beta-galactosidase jelly roll domain; pfam13364"
                     /db_xref="CDD:290101"
     Region          953..1062
                     /region_name="BetaGal_dom4_5"
                     /note="Beta-galactosidase jelly roll domain; pfam13364"
                     /db_xref="CDD:290101"
     CDS             1..1098
                     /locus_tag="HETIRDRAFT_64765"
                     /coded_by="XM_009547592.1:98..3394"
                     /note="candidate b-galactosidase; membrane anchor;
                     candidate b-galactosidase. membrane anchor"
                     /db_xref="GeneID:20678699"
                     /db_xref="InterPro:IPR001944"
                     /db_xref="JGIDB:Hetan2_64765"
ORIGIN      
        1 mtwgahqdsh aldlkvdrdv vdaplalrrk pgtrmpadrt egslnaysvs saiarrrsws
       61 swlllgiass lltyvlllph sapqiwsrsl daafdlsary ysaladvntv gdvaleppra
      121 lfssngrtdq vqwdnyslvl qgqriliysg efhtyrlpvp slwpdilqkv kaaglnaisv
      181 ylhwgainpa pgvidfdgyr aveplyeaak aagiwivlrp gpyinaetta ggiahwvtse
      241 vagplrtnat dfraswqdyi qgvieqtary qiteggpvia iqidneysqn aisgayfsel
      301 eeayhnssiv vpltyndpge hkgfvngsga vdiygldayp qgfdcshpdt wsavttnyhd
      361 yhegtnpsqp wyfpefqggs fdawgptapg yencrqltga sfesvfyrtl wasnaklmsf
      421 ymlyggtswg gipfpgvyts ydygssiaen raltdkytel klqglflrss pefyktdwig
      481 nsstvvsvsn saafavllrn pdtrssywiv rqtsststat infnmtidts agtlqipqvv
      541 ssitlsgrqs kvivgdysfg ahssllysta silfagkigs rdvlflygda dqeheaslat
      601 pgpaslrsds pfvsftpasg nqsvvsflpg isglvtvfdt psqlvlyadt vtagtfwapv
      661 lastnahany wqigtnstll vggphlvrna slsasgtlal rgdlnssvrl tvigppgvkr
      721 vtwngepvdp dtnaaerlts vggftgqlal ksavqgiktp vlrnwkfans lpeadvgfdd
      781 sewtvanhtt tnipfkpfyg dgrvlygcdy gfcentvlwr ghfngtadvk sanlsingge
      841 afaasvwlnd qfigtsygns tnnrnileet ddlfvfpngs lligqdnvit ivqdnmglne
      901 tesspetsrs prgvrgfkln ngtfadwkvq gkvggytnfp dktrgvmneg glfgerkgwh
      961 lpgfdtsswa srslssglpn dnagvgffvt tfdlrvpdgf dvlmsfnfds tpapyrallf
     1021 vngwmmgkfv anlgpqwkfp vhegileyqg tntvavalwa mesvlispql nvtidamldg
     1081 gvgnvvannp pwtsrgrp
//
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