GenomeNet

Database: RefSeq
Entry: XP_010241032
LinkDB: XP_010241032
Original site: XP_010241032 
LOCUS       XP_010241032             152 aa            linear   PLN 16-NOV-2016
DEFINITION  PREDICTED: superoxide dismutase [Cu-Zn] [Nelumbo nucifera].
ACCESSION   XP_010241032
VERSION     XP_010241032.1
DBLINK      BioProject: PRJNA264089
DBSOURCE    REFSEQ: accession XM_010242730.2
KEYWORDS    RefSeq.
SOURCE      Nelumbo nucifera (sacred lotus)
  ORGANISM  Nelumbo nucifera
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Proteales; Nelumbonaceae; Nelumbo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_010729077.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Nelumbo nucifera Annotation Release
                                           101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Nelumbo nucifera"
                     /isolation_source="leaf"
                     /db_xref="taxon:4432"
                     /chromosome="Unknown"
                     /country="China: Wuhan"
                     /collection_date="Jun-2010"
                     /authority="Nelumbo nucifera Gaertn."
     Protein         1..152
                     /product="superoxide dismutase [Cu-Zn]"
                     /calculated_mol_wt=15227
     Region          1..152
                     /region_name="PLN02386"
                     /note="superoxide dismutase [Cu-Zn]"
                     /db_xref="CDD:166027"
     Site            order(5,7,17,19,49..51,112..113)
                     /site_type="other"
                     /note="E-class dimer interface [polypeptide binding]"
                     /db_xref="CDD:238186"
     Site            order(29,87)
                     /site_type="other"
                     /note="P-class dimer interface [polypeptide binding]"
                     /db_xref="CDD:238186"
     Site            order(45,47,62,79,82,119)
                     /site_type="active"
                     /db_xref="CDD:238186"
     Site            order(45,47,62,119)
                     /site_type="other"
                     /note="Cu2+ binding site [ion binding]"
                     /db_xref="CDD:238186"
     Site            order(62,70,79,82)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:238186"
     CDS             1..152
                     /gene="LOC104585738"
                     /coded_by="XM_010242730.2:174..632"
                     /db_xref="GeneID:104585738"
ORIGIN      
        1 mvkavavlgs nagvngtiyf teeedgstkv tgsvsglkpg lhgfhvhalg dttngcmstg
       61 phfnphgkeh gapedenrha gdlgnvtvge dgtvnftivd kqiplsgpns ivgravvvha
      121 dpddlgkggh elskstgnag grvacgiigl qg
//
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