LOCUS XP_010241032 152 aa linear PLN 16-NOV-2016
DEFINITION PREDICTED: superoxide dismutase [Cu-Zn] [Nelumbo nucifera].
ACCESSION XP_010241032
VERSION XP_010241032.1
DBLINK BioProject: PRJNA264089
DBSOURCE REFSEQ: accession XM_010242730.2
KEYWORDS RefSeq.
SOURCE Nelumbo nucifera (sacred lotus)
ORGANISM Nelumbo nucifera
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Proteales; Nelumbonaceae; Nelumbo.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_010729077.1) annotated using gene prediction method: Gnomon,
supported by mRNA evidence.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Nelumbo nucifera Annotation Release
101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 7.2
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..152
/organism="Nelumbo nucifera"
/isolation_source="leaf"
/db_xref="taxon:4432"
/chromosome="Unknown"
/country="China: Wuhan"
/collection_date="Jun-2010"
/authority="Nelumbo nucifera Gaertn."
Protein 1..152
/product="superoxide dismutase [Cu-Zn]"
/calculated_mol_wt=15227
Region 1..152
/region_name="PLN02386"
/note="superoxide dismutase [Cu-Zn]"
/db_xref="CDD:166027"
Site order(5,7,17,19,49..51,112..113)
/site_type="other"
/note="E-class dimer interface [polypeptide binding]"
/db_xref="CDD:238186"
Site order(29,87)
/site_type="other"
/note="P-class dimer interface [polypeptide binding]"
/db_xref="CDD:238186"
Site order(45,47,62,79,82,119)
/site_type="active"
/db_xref="CDD:238186"
Site order(45,47,62,119)
/site_type="other"
/note="Cu2+ binding site [ion binding]"
/db_xref="CDD:238186"
Site order(62,70,79,82)
/site_type="other"
/note="Zn2+ binding site [ion binding]"
/db_xref="CDD:238186"
CDS 1..152
/gene="LOC104585738"
/coded_by="XM_010242730.2:174..632"
/db_xref="GeneID:104585738"
ORIGIN
1 mvkavavlgs nagvngtiyf teeedgstkv tgsvsglkpg lhgfhvhalg dttngcmstg
61 phfnphgkeh gapedenrha gdlgnvtvge dgtvnftivd kqiplsgpns ivgravvvha
121 dpddlgkggh elskstgnag grvacgiigl qg
//